RNA–Protein interactions for RNA: ENST00000263956.7

GTF3C3-201, Transcript of general transcription factor IIIC subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C3, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-201ENST00000263956 PITHD1Q9GZP4 211 aaPredicted RBP7.97□□□□□ -1.13
GTF3C3-201ENST00000263956 C6orf203Q9P0P8 240 aaPredicted RBP7.97□□□□□ -1.13
GTF3C3-201ENST00000263956 COPS7AQ9UBW8 275 aa7.97□□□□□ -1.13
GTF3C3-201ENST00000263956 TBC1D29Q9UFV1 150 aa7.97□□□□□ -1.13
GTF3C3-201ENST00000263956 EBF1Q9UH73 591 aa7.97□□□□□ -1.13
GTF3C3-201ENST00000263956 ANGPT4Q9Y264 503 aa7.97□□□□□ -1.13
GTF3C3-201ENST00000263956 TANC1Q9C0D5 1861 aa7.97□□□□□ -1.13
GTF3C3-201ENST00000263956 FNDC1Q4ZHG4 1894 aaPredicted RBP7.97□□□□□ -1.13
GTF3C3-201ENST00000263956 FEZF1A0PJY2 475 aa7.97□□□□□ -1.13
GTF3C3-201ENST00000263956 FAM234BA2RU67 622 aa7.97□□□□□ -1.13
GTF3C3-201ENST00000263956 E7EQ34 232 aa7.97□□□□□ -1.13
GTF3C3-201ENST00000263956 PSIP1O75475 530 aaKnown RBP7.97□□□□□ -1.13
GTF3C3-201ENST00000263956 RPS17P08708 135 aaKnown RBP7.97□□□□□ -1.13
GTF3C3-201ENST00000263956 GSTM2P28161 218 aa7.97□□□□□ -1.13
GTF3C3-201ENST00000263956 MPLP40238 635 aa7.97□□□□□ -1.13
GTF3C3-201ENST00000263956 ARSFP54793 590 aa7.97□□□□□ -1.13
GTF3C3-201ENST00000263956 MTTPP55157 894 aa7.97□□□□□ -1.13
GTF3C3-201ENST00000263956 PRDX1Q06830 199 aaKnown RBP7.97□□□□□ -1.13
GTF3C3-201ENST00000263956 DLG1Q12959 904 aa7.97□□□□□ -1.13
GTF3C3-201ENST00000263956 FAM174BQ3ZCQ3 159 aa7.97□□□□□ -1.13
GTF3C3-201ENST00000263956 VPS26BQ4G0F5 336 aa7.97□□□□□ -1.13
GTF3C3-201ENST00000263956 GPAT3Q53EU6 434 aa7.97□□□□□ -1.13
GTF3C3-201ENST00000263956 CLNKQ7Z7G1 428 aa7.97□□□□□ -1.13
GTF3C3-201ENST00000263956 DHFR2Q86XF0 187 aa7.97□□□□□ -1.13
GTF3C3-201ENST00000263956 VRK3Q8IV63 474 aa7.97□□□□□ -1.13
GTF3C3-201ENST00000263956 ZC3H7AQ8IWR0 971 aaKnown RBP7.97□□□□□ -1.13
GTF3C3-201ENST00000263956 ARL14Q8N4G2 192 aa7.97□□□□□ -1.13
GTF3C3-201ENST00000263956 RNF148Q8N7C7 305 aa7.97□□□□□ -1.13
GTF3C3-201ENST00000263956 TMEM74Q96NL1 305 aa7.97□□□□□ -1.13
GTF3C3-201ENST00000263956 HOPXQ9BPY8 73 aaPredicted RBP7.97□□□□□ -1.13
GTF3C3-201ENST00000263956 EBF4Q9BQW3 602 aa7.97□□□□□ -1.13
GTF3C3-201ENST00000263956 MMADHCQ9H3L0 296 aaPredicted RBP7.97□□□□□ -1.13
GTF3C3-201ENST00000263956 ZNF556Q9HAH1 456 aa7.97□□□□□ -1.13
GTF3C3-201ENST00000263956 KLHL20Q9Y2M5 609 aa7.97□□□□□ -1.13
GTF3C3-201ENST00000263956 R4GN57 208 aa7.97□□□□□ -1.13
GTF3C3-201ENST00000263956 CCDC163A0A0D9SF12 145 aa7.96□□□□□ -1.13
GTF3C3-201ENST00000263956 SLC9B1P1A6NJY1 282 aa7.96□□□□□ -1.13
GTF3C3-201ENST00000263956 YY2O15391 372 aa7.96□□□□□ -1.13
GTF3C3-201ENST00000263956 B4GALT2O60909 372 aa7.96□□□□□ -1.13
GTF3C3-201ENST00000263956 PDYNP01213 254 aa7.96□□□□□ -1.13
GTF3C3-201ENST00000263956 HOXC4P09017 264 aaPredicted RBP7.96□□□□□ -1.13
GTF3C3-201ENST00000263956 GPR18Q14330 331 aa7.96□□□□□ -1.13
GTF3C3-201ENST00000263956 HERC3Q15034 1050 aa7.96□□□□□ -1.13
GTF3C3-201ENST00000263956 TMEM259Q4ZIN3 620 aa7.96□□□□□ -1.13
GTF3C3-201ENST00000263956 IYDQ6PHW0 289 aa7.96□□□□□ -1.13
GTF3C3-201ENST00000263956 PAOXQ6QHF9 649 aa7.96□□□□□ -1.13
GTF3C3-201ENST00000263956 HUS1BQ8NHY5 278 aa7.96□□□□□ -1.13
GTF3C3-201ENST00000263956 SPPL2AQ8TCT8 520 aa7.96□□□□□ -1.13
GTF3C3-201ENST00000263956 CNDP2Q96KP4 475 aaKnown RBP7.96□□□□□ -1.13
GTF3C3-201ENST00000263956 LINC00615Q96LM1 132 aaPredicted RBP7.96□□□□□ -1.13
GTF3C3-201ENST00000263956 TBC1D10AQ9BXI6 508 aa7.96□□□□□ -1.13
GTF3C3-201ENST00000263956 SPAG4Q9NPE6 437 aa7.96□□□□□ -1.13
GTF3C3-201ENST00000263956 PTBP2Q9UKA9 531 aaKnown RBP7.96□□□□□ -1.13
GTF3C3-201ENST00000263956 CLCA3PQ9Y6N3 262 aa7.96□□□□□ -1.13
GTF3C3-201ENST00000263956 NUMA1Q14980 2115 aa7.96□□□□□ -1.13
GTF3C3-201ENST00000263956 A0A1W2PRB8 838 aa7.96□□□□□ -1.14
GTF3C3-201ENST00000263956 BTN3A3O00478 584 aa7.96□□□□□ -1.14
GTF3C3-201ENST00000263956 PEX12O00623 359 aa7.96□□□□□ -1.14
GTF3C3-201ENST00000263956 VILLO15195 856 aa7.96□□□□□ -1.14
GTF3C3-201ENST00000263956 SLC22A2O15244 555 aa7.96□□□□□ -1.14
GTF3C3-201ENST00000263956 ZSCAN9O15535 394 aaPredicted RBP7.96□□□□□ -1.14
GTF3C3-201ENST00000263956 SHOX2O60902 331 aaPredicted RBP7.96□□□□□ -1.14
GTF3C3-201ENST00000263956 NQO1P15559 274 aaKnown RBP7.96□□□□□ -1.14
GTF3C3-201ENST00000263956 TAS2R50P59544 299 aa7.96□□□□□ -1.14
GTF3C3-201ENST00000263956 HSPB3Q12988 150 aa7.96□□□□□ -1.14
GTF3C3-201ENST00000263956 DEFB134Q4QY38 66 aa7.96□□□□□ -1.14
GTF3C3-201ENST00000263956 CATSPEREQ5SY80 951 aa7.96□□□□□ -1.14
GTF3C3-201ENST00000263956 ARL10Q8N8L6 244 aa7.96□□□□□ -1.14
GTF3C3-201ENST00000263956 WDR48Q8TAF3 677 aa7.96□□□□□ -1.14
GTF3C3-201ENST00000263956 AGAP11Q8TF27 550 aa7.96□□□□□ -1.14
GTF3C3-201ENST00000263956 PROX1Q92786 737 aa7.96□□□□□ -1.14
GTF3C3-201ENST00000263956 NEIL2Q969S2 332 aa7.96□□□□□ -1.14
GTF3C3-201ENST00000263956 OR52B2Q96RD2 323 aa7.96□□□□□ -1.14
GTF3C3-201ENST00000263956 F2RL3Q96RI0 385 aa7.96□□□□□ -1.14
GTF3C3-201ENST00000263956 RTKNQ9BST9 563 aa7.96□□□□□ -1.14
GTF3C3-201ENST00000263956 KIR3DX1Q9H7L2 352 aa7.96□□□□□ -1.14
GTF3C3-201ENST00000263956 TMEM9BQ9NQ34 198 aa7.96□□□□□ -1.14
GTF3C3-201ENST00000263956 ZIM2Q9NZV7 527 aa7.96□□□□□ -1.14
GTF3C3-201ENST00000263956 C19orf25Q9UFG5 118 aaPredicted RBP7.96□□□□□ -1.14
GTF3C3-201ENST00000263956 TMCC3Q9ULS5 477 aa7.96□□□□□ -1.14
GTF3C3-201ENST00000263956 TPST1O60507 370 aa7.96□□□□□ -1.14
GTF3C3-201ENST00000263956 GSNP06396 782 aa7.96□□□□□ -1.14
GTF3C3-201ENST00000263956 NR2F6P10588 404 aa7.96□□□□□ -1.14
GTF3C3-201ENST00000263956 ALOX12P18054 663 aa7.96□□□□□ -1.14
GTF3C3-201ENST00000263956 CDH2P19022 906 aaPredicted RBP7.96□□□□□ -1.14
GTF3C3-201ENST00000263956 TRIM23P36406 574 aa7.96□□□□□ -1.14
GTF3C3-201ENST00000263956 ERVPABLB-1P60509 514 aa7.96□□□□□ -1.14
GTF3C3-201ENST00000263956 SLC25A3Q00325 362 aa7.96□□□□□ -1.14
GTF3C3-201ENST00000263956 ZNF763Q0D2J5 394 aa7.96□□□□□ -1.14
GTF3C3-201ENST00000263956 ZNF155Q12901 538 aaPredicted RBP7.96□□□□□ -1.14
GTF3C3-201ENST00000263956 EPGNQ6UW88 154 aa7.96□□□□□ -1.14
GTF3C3-201ENST00000263956 WDR5BQ86VZ2 330 aa7.96□□□□□ -1.14
GTF3C3-201ENST00000263956 ICA1LQ8NDH6 482 aa7.96□□□□□ -1.14
GTF3C3-201ENST00000263956 C7orf57Q8NEG2 295 aa7.96□□□□□ -1.14
GTF3C3-201ENST00000263956 ZNF483Q8TF39 744 aaPredicted RBP7.96□□□□□ -1.14
GTF3C3-201ENST00000263956 ZUFSPQ96AP4 578 aa7.96□□□□□ -1.14
GTF3C3-201ENST00000263956 DGAT2Q96PD7 388 aa7.96□□□□□ -1.14
GTF3C3-201ENST00000263956 CD180Q99467 661 aa7.96□□□□□ -1.14
GTF3C3-201ENST00000263956 CDC6Q99741 560 aa7.96□□□□□ -1.14
GTF3C3-201ENST00000263956 CMKLR1Q99788 373 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms