RNA–Protein interactions for RNA: ENST00000262812.8

COPE-201, Transcript of coatomer protein complex subunit epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPE, Length 1,141 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-201ENST00000262812 ARHGEF39Q8N4T4 335 aa17.52■□□□□ 0.4
COPE-201ENST00000262812 TMEM102Q8N9M5 508 aaPredicted RBP17.52■□□□□ 0.4
COPE-201ENST00000262812 MFSD9Q8NBP5 474 aa17.52■□□□□ 0.4
COPE-201ENST00000262812 CAMKVQ8NCB2 501 aa17.52■□□□□ 0.4
COPE-201ENST00000262812 ZNF740Q8NDX6 193 aa17.52■□□□□ 0.4
COPE-201ENST00000262812 OR4K1Q8NGD4 311 aa17.52■□□□□ 0.4
COPE-201ENST00000262812 UHMK1Q8TAS1 419 aaKnown RBP17.52■□□□□ 0.4
COPE-201ENST00000262812 STT3BQ8TCJ2 826 aa17.52■□□□□ 0.4
COPE-201ENST00000262812 EXT2Q93063 718 aa17.52■□□□□ 0.4
COPE-201ENST00000262812 RHBDF1Q96CC6 855 aa17.52■□□□□ 0.4
COPE-201ENST00000262812 IP6K3Q96PC2 410 aa17.52■□□□□ 0.4
COPE-201ENST00000262812 SPSB2Q99619 263 aa17.52■□□□□ 0.4
COPE-201ENST00000262812 FAM129AQ9BZQ8 928 aa17.52■□□□□ 0.4
COPE-201ENST00000262812 DRC3Q9H069 523 aa17.52■□□□□ 0.4
COPE-201ENST00000262812 TSPYL1Q9H0U9 437 aa17.52■□□□□ 0.4
COPE-201ENST00000262812 CDC42EP4Q9H3Q1 356 aaKnown RBP17.52■□□□□ 0.4
COPE-201ENST00000262812 VSTM2BA6NLU5 285 aa17.51■□□□□ 0.39
COPE-201ENST00000262812 PYCARD-AS1I3L0S3 204 aa17.51■□□□□ 0.39
COPE-201ENST00000262812 PDGFAP04085 211 aa17.51■□□□□ 0.39
COPE-201ENST00000262812 RHOXF2BP0C7M4 288 aa17.51■□□□□ 0.39
COPE-201ENST00000262812 PLA2G2AP14555 144 aa17.51■□□□□ 0.39
COPE-201ENST00000262812 ECHS1P30084 290 aa17.51■□□□□ 0.39
COPE-201ENST00000262812 SLC26A3P40879 764 aa17.51■□□□□ 0.39
COPE-201ENST00000262812 KCNC1P48547 511 aa17.51■□□□□ 0.39
COPE-201ENST00000262812 RRADP55042 308 aa17.51■□□□□ 0.39
COPE-201ENST00000262812 MAT1AQ00266 395 aaKnown RBP17.51■□□□□ 0.39
COPE-201ENST00000262812 KLC1Q07866 573 aa17.51■□□□□ 0.39
COPE-201ENST00000262812 DLG1Q12959 904 aa17.51■□□□□ 0.39
COPE-201ENST00000262812 SYT16Q17RD7 645 aa17.51■□□□□ 0.39
COPE-201ENST00000262812 TCTN3Q6NUS6 607 aa17.51■□□□□ 0.39
COPE-201ENST00000262812 NXPE4Q6UWF7 544 aa17.51■□□□□ 0.39
COPE-201ENST00000262812 TBC1D1Q86TI0 1168 aaPredicted RBP17.51■□□□□ 0.39
COPE-201ENST00000262812 LAPTM4BQ86VI4 370 aa17.51■□□□□ 0.39
COPE-201ENST00000262812 KCT2Q8NC54 265 aa17.51■□□□□ 0.39
COPE-201ENST00000262812 OR9A4Q8NGU2 314 aa17.51■□□□□ 0.39
COPE-201ENST00000262812 ZCCHC10Q8TBK6 192 aa17.51■□□□□ 0.39
COPE-201ENST00000262812 ESAMQ96AP7 390 aa17.51■□□□□ 0.39
COPE-201ENST00000262812 TM4SF19Q96DZ7 209 aa17.51■□□□□ 0.39
COPE-201ENST00000262812 UBXN10Q96LJ8 280 aa17.51■□□□□ 0.39
COPE-201ENST00000262812 FER1L6-AS2Q96M78 137 aa17.51■□□□□ 0.39
COPE-201ENST00000262812 RHOXF2Q9BQY4 288 aa17.51■□□□□ 0.39
COPE-201ENST00000262812 CRB3Q9BUF7 120 aa17.51■□□□□ 0.39
COPE-201ENST00000262812 SPNS1Q9H2V7 528 aa17.51■□□□□ 0.39
COPE-201ENST00000262812 ALG9Q9H6U8 611 aa17.51■□□□□ 0.39
COPE-201ENST00000262812 CD274Q9NZQ7 290 aa17.51■□□□□ 0.39
COPE-201ENST00000262812 NXT1Q9UKK6 140 aaKnown RBP17.51■□□□□ 0.39
COPE-201ENST00000262812 RNF112Q9ULX5 631 aa17.51■□□□□ 0.39
COPE-201ENST00000262812 NFU1Q9UMS0 254 aa17.51■□□□□ 0.39
COPE-201ENST00000262812 KCNE2Q9Y6J6 123 aa17.51■□□□□ 0.39
COPE-201ENST00000262812 TAPBPO15533 448 aa17.5■□□□□ 0.39
COPE-201ENST00000262812 PRPF4O43172 522 aaKnown RBP eCLIP17.5■□□□□ 0.392e-8■■■■■ 28.6
COPE-201ENST00000262812 SUV39H1O43463 412 aa17.5■□□□□ 0.39
COPE-201ENST00000262812 SLC35E2BP0CK96 405 aa17.5■□□□□ 0.39
COPE-201ENST00000262812 MMP11P24347 488 aa17.5■□□□□ 0.39
COPE-201ENST00000262812 VARSP26640 1264 aaKnown RBP17.5■□□□□ 0.39
COPE-201ENST00000262812 AVPR1BP47901 424 aa17.5■□□□□ 0.39
COPE-201ENST00000262812 DSG2Q14126 1118 aa17.5■□□□□ 0.39
COPE-201ENST00000262812 RBBP5Q15291 538 aaKnown RBP17.5■□□□□ 0.39
COPE-201ENST00000262812 RBBP7Q16576 425 aa17.5■□□□□ 0.39
COPE-201ENST00000262812 DCAF10Q5QP82 559 aa17.5■□□□□ 0.39
COPE-201ENST00000262812 PRSS41Q7RTY9 318 aa17.5■□□□□ 0.39
COPE-201ENST00000262812 TMPRSS11BQ86T26 416 aa17.5■□□□□ 0.39
COPE-201ENST00000262812 RELL1Q8IUW5 271 aa17.5■□□□□ 0.39
COPE-201ENST00000262812 IFT20Q8IY31 132 aa17.5■□□□□ 0.39
COPE-201ENST00000262812 TBC1D19Q8N5T2 526 aa17.5■□□□□ 0.39
COPE-201ENST00000262812 AMER3Q8N944 861 aa17.5■□□□□ 0.39
COPE-201ENST00000262812 FDCSPQ8NFU4 85 aa17.5■□□□□ 0.39
COPE-201ENST00000262812 KIAA1191Q96A73 305 aa17.5■□□□□ 0.39
COPE-201ENST00000262812 MOCOSQ96EN8 888 aa17.5■□□□□ 0.39
COPE-201ENST00000262812 MVB12AQ96EY5 273 aa17.5■□□□□ 0.39
COPE-201ENST00000262812 ACSS3Q9H6R3 686 aa17.5■□□□□ 0.39
COPE-201ENST00000262812 WWOXQ9NZC7 414 aa17.5■□□□□ 0.39
COPE-201ENST00000262812 C3orf18Q9UK00 162 aa17.5■□□□□ 0.39
COPE-201ENST00000262812 FBXL4Q9UKA2 621 aa17.5■□□□□ 0.39
COPE-201ENST00000262812 ACOT9Q9Y305 439 aa17.5■□□□□ 0.39
COPE-201ENST00000262812 TRBC2A0A5B9 178 aa17.49■□□□□ 0.39
COPE-201ENST00000262812 HMX2A2RU54 273 aa17.49■□□□□ 0.39
COPE-201ENST00000262812 SGK494L7N484 410 aa17.49■□□□□ 0.39
COPE-201ENST00000262812 ALOX12BO75342 701 aa17.49■□□□□ 0.39
COPE-201ENST00000262812 S100BP04271 92 aaPredicted RBP17.49■□□□□ 0.39
COPE-201ENST00000262812 IL1RNP18510 177 aa17.49■□□□□ 0.39
COPE-201ENST00000262812 TFEBP19484 476 aa17.49■□□□□ 0.39
COPE-201ENST00000262812 SLC6A12P48065 614 aa17.49■□□□□ 0.39
COPE-201ENST00000262812 HSPA7P48741 367 aa17.49■□□□□ 0.39
COPE-201ENST00000262812 PGDP52209 483 aa17.49■□□□□ 0.39
COPE-201ENST00000262812 IRF9Q00978 393 aa17.49■□□□□ 0.39
COPE-201ENST00000262812 FAM53BQ14153 422 aa17.49■□□□□ 0.39
COPE-201ENST00000262812 TMEM214Q6NUQ4 689 aaKnown RBP17.49■□□□□ 0.39
COPE-201ENST00000262812 KIRREL2Q6UWL6 708 aa17.49■□□□□ 0.39
COPE-201ENST00000262812 SHISA5Q8N114 240 aa17.49■□□□□ 0.39
COPE-201ENST00000262812 CLEC1AQ8NC01 280 aa17.49■□□□□ 0.39
COPE-201ENST00000262812 LRRN4CLQ8ND94 238 aa17.49■□□□□ 0.39
COPE-201ENST00000262812 NXNL1Q96CM4 212 aa17.49■□□□□ 0.39
COPE-201ENST00000262812 MESP1Q9BRJ9 268 aa17.49■□□□□ 0.39
COPE-201ENST00000262812 PELI2Q9HAT8 420 aa17.49■□□□□ 0.39
COPE-201ENST00000262812 NMRAL1Q9HBL8 299 aa17.49■□□□□ 0.39
COPE-201ENST00000262812 SEMA3GQ9NS98 782 aa17.49■□□□□ 0.39
COPE-201ENST00000262812 IGSF5Q9NSI5 407 aa17.49■□□□□ 0.39
COPE-201ENST00000262812 HS3ST3B1Q9Y662 390 aa17.49■□□□□ 0.39
COPE-201ENST00000262812 POC1B-GALNT4F8VUJ3 575 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms