RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 LURAP1Q96LR2 239 aa12.81□□□□□ -0.36
SGCA-201ENST00000262018 ERVK-6Q9BXR3 956 aa12.81□□□□□ -0.36
SGCA-201ENST00000262018 GSTO2Q9H4Y5 243 aa12.81□□□□□ -0.36
SGCA-201ENST00000262018 TXLNGQ9NUQ3 528 aa12.81□□□□□ -0.36
SGCA-201ENST00000262018 ZDHHC2Q9UIJ5 367 aa12.81□□□□□ -0.36
SGCA-201ENST00000262018 ZFP69BQ9UJL9 534 aa12.81□□□□□ -0.36
SGCA-201ENST00000262018 MATN2O00339 956 aa12.8□□□□□ -0.36
SGCA-201ENST00000262018 GFAPP14136 432 aa12.8□□□□□ -0.36
SGCA-201ENST00000262018 MSH3P20585 1137 aa12.8□□□□□ -0.36
SGCA-201ENST00000262018 SERPINB3P29508 390 aa12.8□□□□□ -0.36
SGCA-201ENST00000262018 IDH3AP50213 366 aa12.8□□□□□ -0.36
SGCA-201ENST00000262018 ITGA1P56199 1179 aa12.8□□□□□ -0.36
SGCA-201ENST00000262018 PER3P56645 1201 aa12.8□□□□□ -0.36
SGCA-201ENST00000262018 NAA20P61599 178 aa12.8□□□□□ -0.36
SGCA-201ENST00000262018 RPS18P62269 152 aaKnown RBP12.8□□□□□ -0.36
SGCA-201ENST00000262018 TUBB3Q13509 450 aa12.8□□□□□ -0.36
SGCA-201ENST00000262018 UGT8Q16880 541 aa12.8□□□□□ -0.36
SGCA-201ENST00000262018 ACSBG2Q5FVE4 666 aa12.8□□□□□ -0.36
SGCA-201ENST00000262018 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.8□□□□□ -0.36
SGCA-201ENST00000262018 DOK6Q6PKX4 331 aa12.8□□□□□ -0.36
SGCA-201ENST00000262018 EPGNQ6UW88 154 aa12.8□□□□□ -0.36
SGCA-201ENST00000262018 CYHR1Q6ZMK1 362 aa12.8□□□□□ -0.36
SGCA-201ENST00000262018 ADAMTSL2Q86TH1 951 aa12.8□□□□□ -0.36
SGCA-201ENST00000262018 GPSM1Q86YR5 675 aa12.8□□□□□ -0.36
SGCA-201ENST00000262018 KIRREL3Q8IZU9 778 aa12.8□□□□□ -0.36
SGCA-201ENST00000262018 MYO1HQ8N1T3 1032 aa12.8□□□□□ -0.36
SGCA-201ENST00000262018 NAT14Q8WUY8 206 aa12.8□□□□□ -0.36
SGCA-201ENST00000262018 EXT2Q93063 718 aa12.8□□□□□ -0.36
SGCA-201ENST00000262018 OR6C1Q96RD1 312 aa12.8□□□□□ -0.36
SGCA-201ENST00000262018 EBF4Q9BQW3 602 aa12.8□□□□□ -0.36
SGCA-201ENST00000262018 C1QTNF3Q9BXJ4 246 aa12.8□□□□□ -0.36
SGCA-201ENST00000262018 EML4Q9HC35 981 aaKnown RBP12.8□□□□□ -0.36
SGCA-201ENST00000262018 NUDT4Q9NZJ9 180 aa12.8□□□□□ -0.36
SGCA-201ENST00000262018 VTI1BQ9UEU0 232 aa12.8□□□□□ -0.36
SGCA-201ENST00000262018 CNOT6Q9ULM6 557 aaKnown RBP12.8□□□□□ -0.36
SGCA-201ENST00000262018 G3BP2Q9UN86 482 aaKnown RBP12.8□□□□□ -0.36
SGCA-201ENST00000262018 SVILO95425 2214 aa12.8□□□□□ -0.36
SGCA-201ENST00000262018 A0A1B0GTL3 188 aa12.79□□□□□ -0.36
SGCA-201ENST00000262018 C21orf140B9A014 251 aa12.79□□□□□ -0.36
SGCA-201ENST00000262018 QSOX1O00391 747 aa12.79□□□□□ -0.36
SGCA-201ENST00000262018 FCHO1O14526 889 aa12.79□□□□□ -0.36
SGCA-201ENST00000262018 HDAC3O15379 428 aa12.79□□□□□ -0.36
SGCA-201ENST00000262018 GRID2O43424 1007 aa12.79□□□□□ -0.36
SGCA-201ENST00000262018 SGTAO43765 313 aa12.79□□□□□ -0.36
SGCA-201ENST00000262018 CCDC22O60826 627 aa12.79□□□□□ -0.36
SGCA-201ENST00000262018 ENO3P13929 434 aaPredicted RBP12.79□□□□□ -0.36
SGCA-201ENST00000262018 AOAHP28039 575 aa12.79□□□□□ -0.36
SGCA-201ENST00000262018 AKT1P31749 480 aa12.79□□□□□ -0.36
SGCA-201ENST00000262018 CCR7P32248 378 aa12.79□□□□□ -0.36
SGCA-201ENST00000262018 SCTRP47872 440 aa12.79□□□□□ -0.36
SGCA-201ENST00000262018 ALDH18A1P54886 795 aaKnown RBP12.79□□□□□ -0.36
SGCA-201ENST00000262018 SH3BP2P78314 561 aa12.79□□□□□ -0.36
SGCA-201ENST00000262018 HHEXQ03014 270 aa12.79□□□□□ -0.36
SGCA-201ENST00000262018 ZRSR2Q15696 482 aaKnown RBP12.79□□□□□ -0.36
SGCA-201ENST00000262018 PFKFB4Q16877 469 aa12.79□□□□□ -0.36
SGCA-201ENST00000262018 KHDC1Q4VXA5 237 aaKnown RBP12.79□□□□□ -0.36
SGCA-201ENST00000262018 PLEKHS1Q5SXH7 462 aa12.79□□□□□ -0.36
SGCA-201ENST00000262018 SBSNQ6UWP8 590 aa12.79□□□□□ -0.36
SGCA-201ENST00000262018 CLNKQ7Z7G1 428 aa12.79□□□□□ -0.36
SGCA-201ENST00000262018 TRIM74Q86UV6 250 aa12.79□□□□□ -0.36
SGCA-201ENST00000262018 HPS6Q86YV9 775 aa12.79□□□□□ -0.36
SGCA-201ENST00000262018 SFRP1Q8N474 314 aa12.79□□□□□ -0.36
SGCA-201ENST00000262018 FAR2Q96K12 515 aa12.79□□□□□ -0.36
SGCA-201ENST00000262018 OR2M4Q96R27 311 aa12.79□□□□□ -0.36
SGCA-201ENST00000262018 COG4Q9H9E3 785 aa12.79□□□□□ -0.36
SGCA-201ENST00000262018 LHX9Q9NQ69 397 aa12.79□□□□□ -0.36
SGCA-201ENST00000262018 SAR1AQ9NR31 198 aa12.79□□□□□ -0.36
SGCA-201ENST00000262018 SLC17A4Q9Y2C5 497 aa12.79□□□□□ -0.36
SGCA-201ENST00000262018 A6NL46 340 aa12.79□□□□□ -0.36
SGCA-201ENST00000262018 GPR89AB7ZAQ6 455 aa12.79□□□□□ -0.36
SGCA-201ENST00000262018 ANKRD65E5RJM6 399 aa12.79□□□□□ -0.36
SGCA-201ENST00000262018 KPNA5O15131 536 aa12.79□□□□□ -0.36
SGCA-201ENST00000262018 LRRTM2O43300 516 aa12.79□□□□□ -0.36
SGCA-201ENST00000262018 VEGFDO43915 354 aa12.79□□□□□ -0.36
SGCA-201ENST00000262018 SUPT7LO94864 414 aa12.79□□□□□ -0.36
SGCA-201ENST00000262018 EML2O95834 649 aa12.79□□□□□ -0.36
SGCA-201ENST00000262018 RPS17P08708 135 aaKnown RBP12.79□□□□□ -0.36
SGCA-201ENST00000262018 GPR89BP0CG08 455 aa12.79□□□□□ -0.36
SGCA-201ENST00000262018 SEPHS1P49903 392 aa12.79□□□□□ -0.36
SGCA-201ENST00000262018 TBCCQ15814 346 aa12.79□□□□□ -0.36
SGCA-201ENST00000262018 PPP1R3AQ16821 1122 aa12.79□□□□□ -0.36
SGCA-201ENST00000262018 PLEKHN1Q494U1 663 aaPredicted RBP12.79□□□□□ -0.36
SGCA-201ENST00000262018 GDF7Q7Z4P5 450 aa12.79□□□□□ -0.36
SGCA-201ENST00000262018 CUZD1Q86UP6 607 aa12.79□□□□□ -0.36
SGCA-201ENST00000262018 C10orf67Q8IYJ2 551 aa12.79□□□□□ -0.36
SGCA-201ENST00000262018 FDCSPQ8NFU4 85 aa12.79□□□□□ -0.36
SGCA-201ENST00000262018 RILPQ96NA2 401 aa12.79□□□□□ -0.36
SGCA-201ENST00000262018 NUDT9Q9BW91 350 aa12.79□□□□□ -0.36
SGCA-201ENST00000262018 ZCCHC2Q9C0B9 1178 aaKnown RBP12.79□□□□□ -0.36
SGCA-201ENST00000262018 RMI1Q9H9A7 625 aa12.79□□□□□ -0.36
SGCA-201ENST00000262018 TRIM39Q9HCM9 518 aa12.79□□□□□ -0.36
SGCA-201ENST00000262018 OARD1Q9Y530 152 aa12.79□□□□□ -0.36
SGCA-201ENST00000262018 POLEQ07864 2286 aa12.78□□□□□ -0.36
SGCA-201ENST00000262018 FBN3Q75N90 2809 aa12.78□□□□□ -0.36
SGCA-201ENST00000262018 NUAK1O60285 661 aa12.78□□□□□ -0.36
SGCA-201ENST00000262018 ZG16O60844 167 aa12.78□□□□□ -0.36
SGCA-201ENST00000262018 MTX2O75431 263 aa12.78□□□□□ -0.36
SGCA-201ENST00000262018 CEACAM4O75871 244 aa12.78□□□□□ -0.36
SGCA-201ENST00000262018 SIX3O95343 332 aaPredicted RBP12.78□□□□□ -0.36
SGCA-201ENST00000262018 FTH1P02794 183 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms