RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 ZNF613Q6PF04 617 aa15.73■□□□□ 0.11
SREBF1-201ENST00000261646 PELI3Q8N2H9 469 aa15.73■□□□□ 0.11
SREBF1-201ENST00000261646 PARP16Q8N5Y8 322 aa15.73■□□□□ 0.11
SREBF1-201ENST00000261646 C1orf52Q8N6N3 182 aaKnown RBP15.73■□□□□ 0.11
SREBF1-201ENST00000261646 UBE2E3Q969T4 207 aa15.73■□□□□ 0.11
SREBF1-201ENST00000261646 MAPKAP1Q9BPZ7 522 aa15.73■□□□□ 0.11
SREBF1-201ENST00000261646 SLC2A11Q9BYW1 496 aa15.73■□□□□ 0.11
SREBF1-201ENST00000261646 SMOC2Q9H3U7 446 aa15.73■□□□□ 0.11
SREBF1-201ENST00000261646 NLKQ9UBE8 527 aa15.73■□□□□ 0.11
SREBF1-201ENST00000261646 RGS17Q9UGC6 210 aaPredicted RBP15.73■□□□□ 0.11
SREBF1-201ENST00000261646 GTF2IRD1Q9UHL9 959 aa15.73■□□□□ 0.11
SREBF1-201ENST00000261646 ENTPD4Q9Y227 616 aa15.73■□□□□ 0.11
SREBF1-201ENST00000261646 DOCK2Q92608 1830 aa15.73■□□□□ 0.11
SREBF1-201ENST00000261646 TRAV6A0A075B6T7 132 aa15.72■□□□□ 0.11
SREBF1-201ENST00000261646 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.72■□□□□ 0.11
SREBF1-201ENST00000261646 KPNA3O00505 521 aaPredicted RBP15.72■□□□□ 0.11
SREBF1-201ENST00000261646 MID1O15344 667 aa15.72■□□□□ 0.11
SREBF1-201ENST00000261646 NTSP30990 170 aa15.72■□□□□ 0.11
SREBF1-201ENST00000261646 CORO1AP31146 461 aaKnown RBP15.72■□□□□ 0.11
SREBF1-201ENST00000261646 MTAPQ13126 283 aa15.72■□□□□ 0.11
SREBF1-201ENST00000261646 C18orf21Q32NC0 220 aaPredicted RBP15.72■□□□□ 0.11
SREBF1-201ENST00000261646 KLHL22Q53GT1 634 aa15.72■□□□□ 0.11
SREBF1-201ENST00000261646 LETMD1Q6P1Q0 360 aa15.72■□□□□ 0.11
SREBF1-201ENST00000261646 SHQ1Q6PI26 577 aaKnown RBP15.72■□□□□ 0.11
SREBF1-201ENST00000261646 QRFPRQ96P65 431 aa15.72■□□□□ 0.11
SREBF1-201ENST00000261646 PRDM8Q9NQV8 689 aa15.72■□□□□ 0.11
SREBF1-201ENST00000261646 DHRS7Q9Y394 339 aa15.72■□□□□ 0.11
SREBF1-201ENST00000261646 PCDHA9Q9Y5H5 950 aa15.72■□□□□ 0.11
SREBF1-201ENST00000261646 WNT9AO14904 365 aa15.72■□□□□ 0.11
SREBF1-201ENST00000261646 CAPN15O75808 1086 aa15.72■□□□□ 0.11
SREBF1-201ENST00000261646 EBLN1P0CF75 366 aa15.72■□□□□ 0.11
SREBF1-201ENST00000261646 CPN2P22792 545 aa15.72■□□□□ 0.11
SREBF1-201ENST00000261646 GMFBP60983 142 aa15.72■□□□□ 0.11
SREBF1-201ENST00000261646 CDK6Q00534 326 aa15.72■□□□□ 0.11
SREBF1-201ENST00000261646 PTCHD3Q3KNS1 767 aa15.72■□□□□ 0.11
SREBF1-201ENST00000261646 ADPRMQ3LIE5 342 aa15.72■□□□□ 0.11
SREBF1-201ENST00000261646 SETMARQ53H47 684 aaPredicted RBP15.72■□□□□ 0.11
SREBF1-201ENST00000261646 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.72■□□□□ 0.11
SREBF1-201ENST00000261646 ZNF697Q5TEC3 545 aa15.72■□□□□ 0.11
SREBF1-201ENST00000261646 ZNF433Q8N7K0 673 aaPredicted RBP15.72■□□□□ 0.11
SREBF1-201ENST00000261646 PROKR1Q8TCW9 393 aa15.72■□□□□ 0.11
SREBF1-201ENST00000261646 DEDD2Q8WXF8 326 aa15.72■□□□□ 0.11
SREBF1-201ENST00000261646 SNAPC3Q92966 411 aa15.72■□□□□ 0.11
SREBF1-201ENST00000261646 MRPL48Q96GC5 212 aaKnown RBP15.72■□□□□ 0.11
SREBF1-201ENST00000261646 CNDP2Q96KP4 475 aaKnown RBP15.72■□□□□ 0.11
SREBF1-201ENST00000261646 SLC35A5Q9BS91 424 aa15.72■□□□□ 0.11
SREBF1-201ENST00000261646 CCDC32Q9BV29 185 aa15.72■□□□□ 0.11
SREBF1-201ENST00000261646 RAD18Q9NS91 495 aa15.72■□□□□ 0.11
SREBF1-201ENST00000261646 TNRC6CQ9HCJ0 1690 aaKnown RBP15.72■□□□□ 0.11
SREBF1-201ENST00000261646 MAZP56270 477 aaKnown RBP15.72■□□□□ 0.11
SREBF1-201ENST00000261646 SPHARQ15513 63 aa15.72■□□□□ 0.11
SREBF1-201ENST00000261646 SMYD5Q6GMV2 418 aa15.72■□□□□ 0.11
SREBF1-201ENST00000261646 KIAA1161Q6NSJ0 714 aa15.72■□□□□ 0.11
SREBF1-201ENST00000261646 ZNF367Q7RTV3 350 aa15.72■□□□□ 0.11
SREBF1-201ENST00000261646 NOXA1Q86UR1 476 aa15.72■□□□□ 0.11
SREBF1-201ENST00000261646 NFKBIDQ8NI38 313 aa15.72■□□□□ 0.11
SREBF1-201ENST00000261646 ERMAPQ96PL5 475 aaPredicted RBP15.72■□□□□ 0.11
SREBF1-201ENST00000261646 TMED9Q9BVK6 235 aa15.72■□□□□ 0.11
SREBF1-201ENST00000261646 MND1Q9BWT6 205 aa15.72■□□□□ 0.11
SREBF1-201ENST00000261646 THG1LQ9NWX6 298 aaKnown RBP15.72■□□□□ 0.11
SREBF1-201ENST00000261646 PHF11Q9UIL8 331 aa15.72■□□□□ 0.11
SREBF1-201ENST00000261646 KCNE1P15382 129 aa15.72■□□□□ 0.11
SREBF1-201ENST00000261646 CLEC12AQ5QGZ9 265 aa15.72■□□□□ 0.11
SREBF1-201ENST00000261646 RNF180Q86T96 592 aa15.72■□□□□ 0.11
SREBF1-201ENST00000261646 GEMIN6Q8WXD5 167 aaKnown RBP15.72■□□□□ 0.11
SREBF1-201ENST00000261646 SGCDQ92629 289 aa15.72■□□□□ 0.11
SREBF1-201ENST00000261646 EXOSC8Q96B26 276 aaKnown RBP15.72■□□□□ 0.11
SREBF1-201ENST00000261646 FAM129BQ96TA1 746 aa15.72■□□□□ 0.11
SREBF1-201ENST00000261646 C16orf70Q9BSU1 422 aa15.72■□□□□ 0.11
SREBF1-201ENST00000261646 SLITRK2Q9H156 845 aa15.72■□□□□ 0.11
SREBF1-201ENST00000261646 MBD2Q9UBB5 411 aa15.72■□□□□ 0.11
SREBF1-201ENST00000261646 CLCA1A8K7I4 914 aa15.71■□□□□ 0.11
SREBF1-201ENST00000261646 KDM4BO94953 1096 aa15.71■□□□□ 0.11
SREBF1-201ENST00000261646 CREMQ03060 361 aa15.71■□□□□ 0.11
SREBF1-201ENST00000261646 HSPB3Q12988 150 aa15.71■□□□□ 0.11
SREBF1-201ENST00000261646 RPA4Q13156 261 aa15.71■□□□□ 0.11
SREBF1-201ENST00000261646 MAD2L1BPQ15013 274 aaPredicted RBP15.71■□□□□ 0.11
SREBF1-201ENST00000261646 USP50Q70EL3 339 aaPredicted RBP15.71■□□□□ 0.11
SREBF1-201ENST00000261646 NRARPQ7Z6K4 114 aa15.71■□□□□ 0.11
SREBF1-201ENST00000261646 B3GNT8Q7Z7M8 397 aa15.71■□□□□ 0.11
SREBF1-201ENST00000261646 Q8N402 240 aa15.71■□□□□ 0.11
SREBF1-201ENST00000261646 SLC22A17Q8WUG5 538 aa15.71■□□□□ 0.11
SREBF1-201ENST00000261646 AKAP1Q92667 903 aaKnown RBP eCLIP15.71■□□□□ 0.112e-7■■■□□ 16.5
SREBF1-201ENST00000261646 UROC1Q96N76 676 aa15.71■□□□□ 0.11
SREBF1-201ENST00000261646 PAAF1Q9BRP4 392 aa15.71■□□□□ 0.11
SREBF1-201ENST00000261646 TNKS2Q9H2K2 1166 aa15.71■□□□□ 0.11
SREBF1-201ENST00000261646 MAGIXQ9H6Y5 334 aa15.71■□□□□ 0.11
SREBF1-201ENST00000261646 PAK6Q9NQU5 681 aaPredicted RBP15.71■□□□□ 0.11
SREBF1-201ENST00000261646 CD84Q9UIB8 345 aa15.71■□□□□ 0.11
SREBF1-201ENST00000261646 ANKRD34BA5PLL1 514 aa15.71■□□□□ 0.11
SREBF1-201ENST00000261646 UBFD1O14562 309 aaKnown RBP15.71■□□□□ 0.11
SREBF1-201ENST00000261646 EPOP01588 193 aa15.71■□□□□ 0.11
SREBF1-201ENST00000261646 PIGAP37287 484 aa15.71■□□□□ 0.11
SREBF1-201ENST00000261646 NSG1P42857 185 aa15.71■□□□□ 0.11
SREBF1-201ENST00000261646 UAP1L1Q3KQV9 507 aa15.71■□□□□ 0.11
SREBF1-201ENST00000261646 MS4A13Q5J8X5 152 aa15.71■□□□□ 0.11
SREBF1-201ENST00000261646 ZNF691Q5VV52 312 aa15.71■□□□□ 0.11
SREBF1-201ENST00000261646 C22orf42Q6IC83 251 aa15.71■□□□□ 0.11
SREBF1-201ENST00000261646 ADGRD2Q7Z7M1 963 aa15.71■□□□□ 0.11
SREBF1-201ENST00000261646 CELF2-AS1Q8N7Q2 184 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms