RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 CHRFAM7AQ494W8 412 aa7.51□□□□□ -1.21
GPNMB-201ENST00000258733 INTS6LQ5JSJ4 861 aaKnown RBP7.51□□□□□ -1.21
GPNMB-201ENST00000258733 WSCD1Q658N2 575 aa7.51□□□□□ -1.21
GPNMB-201ENST00000258733 ARHGAP17Q68EM7 881 aa7.51□□□□□ -1.21
GPNMB-201ENST00000258733 LPCAT3Q6P1A2 487 aa7.51□□□□□ -1.21
GPNMB-201ENST00000258733 SYDE1Q6ZW31 735 aaPredicted RBP7.51□□□□□ -1.21
GPNMB-201ENST00000258733 ZNF765Q7L2R6 523 aa7.51□□□□□ -1.21
GPNMB-201ENST00000258733 IQCHQ86VS3 1027 aa7.51□□□□□ -1.21
GPNMB-201ENST00000258733 ACBD4Q8NC06 268 aa7.51□□□□□ -1.21
GPNMB-201ENST00000258733 OR6J1Q8NGC5 347 aa7.51□□□□□ -1.21
GPNMB-201ENST00000258733 SPATA20Q8TB22 786 aa7.51□□□□□ -1.21
GPNMB-201ENST00000258733 C16orf78Q8WTQ4 265 aa7.51□□□□□ -1.21
GPNMB-201ENST00000258733 FKBP10Q96AY3 582 aa7.51□□□□□ -1.21
GPNMB-201ENST00000258733 L3HYPDHQ96EM0 354 aa7.51□□□□□ -1.21
GPNMB-201ENST00000258733 MCCC1Q96RQ3 725 aaPredicted RBP7.51□□□□□ -1.21
GPNMB-201ENST00000258733 ALOXE3Q9BYJ1 711 aa7.51□□□□□ -1.21
GPNMB-201ENST00000258733 COQ10BQ9H8M1 238 aa7.51□□□□□ -1.21
GPNMB-201ENST00000258733 TLR8Q9NR97 1041 aaKnown RBP7.51□□□□□ -1.21
GPNMB-201ENST00000258733 ARHGAP20Q9P2F6 1191 aa7.51□□□□□ -1.21
GPNMB-201ENST00000258733 UBQLN2Q9UHD9 624 aa7.51□□□□□ -1.21
GPNMB-201ENST00000258733 MRPS18CQ9Y3D5 142 aaKnown RBP7.51□□□□□ -1.21
GPNMB-201ENST00000258733 A0A087X0M5 115 aa7.51□□□□□ -1.21
GPNMB-201ENST00000258733 A0A1B0GX30 115 aa7.51□□□□□ -1.21
GPNMB-201ENST00000258733 DHX15O43143 795 aaKnown RBP7.51□□□□□ -1.21
GPNMB-201ENST00000258733 MTX2O75431 263 aa7.51□□□□□ -1.21
GPNMB-201ENST00000258733 NDUFS3O75489 264 aa7.51□□□□□ -1.21
GPNMB-201ENST00000258733 PAPLNO95428 1278 aa7.51□□□□□ -1.21
GPNMB-201ENST00000258733 IGHEP01854 428 aa7.51□□□□□ -1.21
GPNMB-201ENST00000258733 RALBP11234 206 aa7.51□□□□□ -1.21
GPNMB-201ENST00000258733 LBPP18428 481 aa7.51□□□□□ -1.21
GPNMB-201ENST00000258733 NT5EP21589 574 aa7.51□□□□□ -1.21
GPNMB-201ENST00000258733 ITGA3P26006 1051 aa7.51□□□□□ -1.21
GPNMB-201ENST00000258733 THBS4P35443 961 aa7.51□□□□□ -1.21
GPNMB-201ENST00000258733 BRCC3P46736 316 aa7.51□□□□□ -1.21
GPNMB-201ENST00000258733 CAMLGP49069 296 aa7.51□□□□□ -1.21
GPNMB-201ENST00000258733 NAPAP54920 295 aa7.51□□□□□ -1.21
GPNMB-201ENST00000258733 ALCAMQ13740 583 aa7.51□□□□□ -1.21
GPNMB-201ENST00000258733 RPS6KA2Q15349 733 aa7.51□□□□□ -1.21
GPNMB-201ENST00000258733 PROX2Q3B8N5 592 aa7.51□□□□□ -1.21
GPNMB-201ENST00000258733 ATPAF1Q5TC12 328 aaPredicted RBP7.51□□□□□ -1.21
GPNMB-201ENST00000258733 PRAMEF20Q5VT98 475 aa7.51□□□□□ -1.21
GPNMB-201ENST00000258733 PRAMEF13Q5VWM6 474 aa7.51□□□□□ -1.21
GPNMB-201ENST00000258733 CES4AQ5XG92 561 aa7.51□□□□□ -1.21
GPNMB-201ENST00000258733 METTL7BQ6UX53 244 aa7.51□□□□□ -1.21
GPNMB-201ENST00000258733 MAMDC4Q6UXC1 1216 aa7.51□□□□□ -1.21
GPNMB-201ENST00000258733 THNSL2Q86YJ6 484 aa7.51□□□□□ -1.21
GPNMB-201ENST00000258733 IRF2BP1Q8IU81 584 aa7.51□□□□□ -1.21
GPNMB-201ENST00000258733 SLC22A15Q8IZD6 547 aa7.51□□□□□ -1.21
GPNMB-201ENST00000258733 STPG2Q8N412 459 aa7.51□□□□□ -1.21
GPNMB-201ENST00000258733 CERS5Q8N5B7 392 aa7.51□□□□□ -1.21
GPNMB-201ENST00000258733 ZMIZ2Q8NF64 920 aa7.51□□□□□ -1.21
GPNMB-201ENST00000258733 NLGN2Q8NFZ4 835 aa7.51□□□□□ -1.21
GPNMB-201ENST00000258733 OR52M1Q8NGK5 317 aa7.51□□□□□ -1.21
GPNMB-201ENST00000258733 WDR36Q8NI36 951 aaKnown RBP7.51□□□□□ -1.21
GPNMB-201ENST00000258733 ZNF596Q8TC21 504 aa7.51□□□□□ -1.21
GPNMB-201ENST00000258733 PPWD1Q96BP3 646 aaKnown RBP7.51□□□□□ -1.21
GPNMB-201ENST00000258733 MS4A3Q96HJ5 214 aa7.51□□□□□ -1.21
GPNMB-201ENST00000258733 HYLS1Q96M11 299 aa7.51□□□□□ -1.21
GPNMB-201ENST00000258733 ATP6V0BQ99437 205 aa7.51□□□□□ -1.21
GPNMB-201ENST00000258733 APOL4Q9BPW4 351 aa7.51□□□□□ -1.21
GPNMB-201ENST00000258733 FUNDC2Q9BWH2 189 aa7.51□□□□□ -1.21
GPNMB-201ENST00000258733 BCAS3Q9H6U6 928 aa7.51□□□□□ -1.21
GPNMB-201ENST00000258733 CTPS2Q9NRF8 586 aa7.51□□□□□ -1.21
GPNMB-201ENST00000258733 MBIPQ9NS73 344 aa7.51□□□□□ -1.21
GPNMB-201ENST00000258733 MARK1Q9P0L2 795 aa7.51□□□□□ -1.21
GPNMB-201ENST00000258733 DNAJB11Q9UBS4 358 aa7.51□□□□□ -1.21
GPNMB-201ENST00000258733 MKLN1Q9UL63 735 aa7.51□□□□□ -1.21
GPNMB-201ENST00000258733 STAP1Q9ULZ2 295 aa7.51□□□□□ -1.21
GPNMB-201ENST00000258733 LMO7Q8WWI1 1683 aa7.51□□□□□ -1.21
GPNMB-201ENST00000258733 A8MXK9 166 aa7.5□□□□□ -1.21
GPNMB-201ENST00000258733 EEF2KO00418 725 aaKnown RBP7.5□□□□□ -1.21
GPNMB-201ENST00000258733 STK25O00506 426 aa7.5□□□□□ -1.21
GPNMB-201ENST00000258733 PRMT5O14744 637 aaPredicted RBP7.5□□□□□ -1.21
GPNMB-201ENST00000258733 ATXN7O15265 892 aaPredicted RBP7.5□□□□□ -1.21
GPNMB-201ENST00000258733 FADS1O60427 444 aa7.5□□□□□ -1.21
GPNMB-201ENST00000258733 ENTPD3O75355 529 aa7.5□□□□□ -1.21
GPNMB-201ENST00000258733 RFPL3O75679 317 aa7.5□□□□□ -1.21
GPNMB-201ENST00000258733 LTFP02788 710 aa7.5□□□□□ -1.21
GPNMB-201ENST00000258733 RAF1P04049 648 aa7.5□□□□□ -1.21
GPNMB-201ENST00000258733 HEXAP06865 529 aa7.5□□□□□ -1.21
GPNMB-201ENST00000258733 C5AR1P21730 350 aa7.5□□□□□ -1.21
GPNMB-201ENST00000258733 MYF6P23409 242 aa7.5□□□□□ -1.21
GPNMB-201ENST00000258733 CRYBB1P53674 252 aaPredicted RBP7.5□□□□□ -1.21
GPNMB-201ENST00000258733 PLA2G16P53816 162 aa7.5□□□□□ -1.21
GPNMB-201ENST00000258733 STARD6P59095 220 aa7.5□□□□□ -1.21
GPNMB-201ENST00000258733 UBE2G2P60604 165 aa7.5□□□□□ -1.21
GPNMB-201ENST00000258733 ACSM1Q08AH1 577 aa7.5□□□□□ -1.21
GPNMB-201ENST00000258733 TP53BP2Q13625 1128 aa7.5□□□□□ -1.21
GPNMB-201ENST00000258733 EXOSC2Q13868 293 aaKnown RBP7.5□□□□□ -1.21
GPNMB-201ENST00000258733 MBTPS1Q14703 1052 aa7.5□□□□□ -1.21
GPNMB-201ENST00000258733 FAM187BQ17R55 369 aa7.5□□□□□ -1.21
GPNMB-201ENST00000258733 BCL7AQ4VC05 210 aa7.5□□□□□ -1.21
GPNMB-201ENST00000258733 MROH9Q5TGP6 573 aa7.5□□□□□ -1.21
GPNMB-201ENST00000258733 ADGRF4Q8IZF3 695 aa7.5□□□□□ -1.21
GPNMB-201ENST00000258733 PACRGLQ8N7B6 248 aa7.5□□□□□ -1.21
GPNMB-201ENST00000258733 GDPD1Q8N9F7 314 aa7.5□□□□□ -1.21
GPNMB-201ENST00000258733 TMEM102Q8N9M5 508 aaPredicted RBP7.5□□□□□ -1.21
GPNMB-201ENST00000258733 OR7A2PQ8NGA2 310 aa7.5□□□□□ -1.21
GPNMB-201ENST00000258733 SLC22A17Q8WUG5 538 aa7.5□□□□□ -1.21
GPNMB-201ENST00000258733 SLAMF9Q96A28 289 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms