RNA–Protein interactions for RNA: ENST00000233505.12

CENPA-201, Transcript of centromere protein A, humanhuman

TSL 1 (best) BASIC

Gene CENPA, Length 1,299 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CENPA-201ENST00000233505 CCDC153Q494R4 210 aa18.38■□□□□ 0.53
CENPA-201ENST00000233505 MANEAQ5SRI9 462 aa18.38■□□□□ 0.53
CENPA-201ENST00000233505 ARHGEF39Q8N4T4 335 aa18.38■□□□□ 0.53
CENPA-201ENST00000233505 IL22RA1Q8N6P7 574 aa18.38■□□□□ 0.53
CENPA-201ENST00000233505 CAMKVQ8NCB2 501 aa18.38■□□□□ 0.53
CENPA-201ENST00000233505 TTLQ8NG68 377 aa18.38■□□□□ 0.53
CENPA-201ENST00000233505 CLIP3Q96DZ5 547 aa18.38■□□□□ 0.53
CENPA-201ENST00000233505 TM4SF19Q96DZ7 209 aa18.38■□□□□ 0.53
CENPA-201ENST00000233505 ZIM3Q96PE6 472 aa18.38■□□□□ 0.53
CENPA-201ENST00000233505 GBP5Q96PP8 586 aa18.38■□□□□ 0.53
CENPA-201ENST00000233505 C17orf62Q9BQA9 187 aa18.38■□□□□ 0.53
CENPA-201ENST00000233505 EFHD1Q9BUP0 239 aa18.38■□□□□ 0.53
CENPA-201ENST00000233505 EFCAB11Q9BUY7 163 aa18.38■□□□□ 0.53
CENPA-201ENST00000233505 NLNQ9BYT8 704 aa18.38■□□□□ 0.53
CENPA-201ENST00000233505 NT5DC2Q9H857 520 aa18.38■□□□□ 0.53
CENPA-201ENST00000233505 CUTCQ9NTM9 273 aa18.38■□□□□ 0.53
CENPA-201ENST00000233505 TXLNGQ9NUQ3 528 aa18.38■□□□□ 0.53
CENPA-201ENST00000233505 GEMIN8Q9NWZ8 242 aaKnown RBP18.38■□□□□ 0.53
CENPA-201ENST00000233505 GRID1Q9ULK0 1009 aa18.38■□□□□ 0.53
CENPA-201ENST00000233505 URB1O60287 2271 aaKnown RBP18.38■□□□□ 0.53
CENPA-201ENST00000233505 TEX51A0A1B0GUA7 166 aa18.37■□□□□ 0.53
CENPA-201ENST00000233505 A8MT66 165 aa18.37■□□□□ 0.53
CENPA-201ENST00000233505 FOXO6A8MYZ6 492 aa18.37■□□□□ 0.53
CENPA-201ENST00000233505 E2F3O00716 465 aa18.37■□□□□ 0.53
CENPA-201ENST00000233505 TERTO14746 1132 aaKnown RBP18.37■□□□□ 0.53
CENPA-201ENST00000233505 DSCR3O14972 297 aa18.37■□□□□ 0.53
CENPA-201ENST00000233505 H2AFYO75367 372 aaKnown RBP18.37■□□□□ 0.53
CENPA-201ENST00000233505 KATNA1O75449 491 aa18.37■□□□□ 0.53
CENPA-201ENST00000233505 ATP5F1P24539 256 aaPredicted RBP18.37■□□□□ 0.53
CENPA-201ENST00000233505 LAPTM5Q13571 262 aa18.37■□□□□ 0.53
CENPA-201ENST00000233505 MUM1Q2TAK8 710 aa18.37■□□□□ 0.53
CENPA-201ENST00000233505 PAGE2BQ5JRK9 111 aa18.37■□□□□ 0.53
CENPA-201ENST00000233505 ASPGQ86U10 573 aa18.37■□□□□ 0.53
CENPA-201ENST00000233505 KRT78Q8N1N4 520 aa18.37■□□□□ 0.53
CENPA-201ENST00000233505 KIAA1143Q96AT1 154 aaPredicted RBP18.37■□□□□ 0.53
CENPA-201ENST00000233505 MVB12AQ96EY5 273 aa18.37■□□□□ 0.53
CENPA-201ENST00000233505 PTCD3Q96EY7 689 aaKnown RBP18.37■□□□□ 0.53
CENPA-201ENST00000233505 NAF1Q96HR8 494 aaKnown RBP18.37■□□□□ 0.53
CENPA-201ENST00000233505 APOPT1Q96IL0 206 aa18.37■□□□□ 0.53
CENPA-201ENST00000233505 C10orf90Q96M02 699 aa18.37■□□□□ 0.53
CENPA-201ENST00000233505 CCNL2Q96S94 520 aaPredicted RBP18.37■□□□□ 0.53
CENPA-201ENST00000233505 SPNS1Q9H2V7 528 aa18.37■□□□□ 0.53
CENPA-201ENST00000233505 ZFP69BQ9UJL9 534 aa18.37■□□□□ 0.53
CENPA-201ENST00000233505 EMCNQ9ULC0 261 aa18.37■□□□□ 0.53
CENPA-201ENST00000233505 RUVBL1Q9Y265 456 aaKnown RBP18.37■□□□□ 0.53
CENPA-201ENST00000233505 FEZF1A0PJY2 475 aa18.36■□□□□ 0.53
CENPA-201ENST00000233505 HYKKA2RU49 373 aa18.36■□□□□ 0.53
CENPA-201ENST00000233505 P2RX6O15547 441 aa18.36■□□□□ 0.53
CENPA-201ENST00000233505 OR1F1O43749 312 aa18.36■□□□□ 0.53
CENPA-201ENST00000233505 LCMT2O60294 686 aaKnown RBP18.36■□□□□ 0.53
CENPA-201ENST00000233505 UGDHO60701 494 aa18.36■□□□□ 0.53
CENPA-201ENST00000233505 PRAMEF4O60810 478 aa18.36■□□□□ 0.53
CENPA-201ENST00000233505 SNRNP200O75643 2136 aaKnown RBP18.36■□□□□ 0.53
CENPA-201ENST00000233505 WFS1O76024 890 aa18.36■□□□□ 0.53
CENPA-201ENST00000233505 SIX3O95343 332 aaPredicted RBP18.36■□□□□ 0.53
CENPA-201ENST00000233505 PROCP04070 461 aa18.36■□□□□ 0.53
CENPA-201ENST00000233505 EIF2S1P05198 315 aaKnown RBP18.36■□□□□ 0.53
CENPA-201ENST00000233505 RPS17P08708 135 aaKnown RBP18.36■□□□□ 0.53
CENPA-201ENST00000233505 VARSP26640 1264 aaKnown RBP18.36■□□□□ 0.53
CENPA-201ENST00000233505 IRF8Q02556 426 aa18.36■□□□□ 0.53
CENPA-201ENST00000233505 PWP1Q13610 501 aa18.36■□□□□ 0.53
CENPA-201ENST00000233505 SLBPQ14493 270 aaKnown RBP eCLIP18.36■□□□□ 0.53
CENPA-201ENST00000233505 BROXQ5VW32 411 aa18.36■□□□□ 0.53
CENPA-201ENST00000233505 PRAMEF9Q5VWM5 478 aa18.36■□□□□ 0.53
CENPA-201ENST00000233505 PRMT9Q6P2P2 845 aa18.36■□□□□ 0.53
CENPA-201ENST00000233505 C16orf46Q6P387 395 aa18.36■□□□□ 0.53
CENPA-201ENST00000233505 SLC22A9Q8IVM8 553 aa18.36■□□□□ 0.53
CENPA-201ENST00000233505 C4orf33Q8N1A6 199 aa18.36■□□□□ 0.53
CENPA-201ENST00000233505 TEX9Q8N6V9 391 aa18.36■□□□□ 0.53
CENPA-201ENST00000233505 BANPQ8N9N5 519 aa18.36■□□□□ 0.53
CENPA-201ENST00000233505 ZNF740Q8NDX6 193 aa18.36■□□□□ 0.53
CENPA-201ENST00000233505 RDH11Q8TC12 318 aa18.36■□□□□ 0.53
CENPA-201ENST00000233505 CCDC126Q96EE4 140 aa18.36■□□□□ 0.53
CENPA-201ENST00000233505 PHF21BQ96EK2 531 aa18.36■□□□□ 0.53
CENPA-201ENST00000233505 CRELD1Q96HD1 420 aa18.36■□□□□ 0.53
CENPA-201ENST00000233505 STARD5Q9NSY2 213 aa18.36■□□□□ 0.53
CENPA-201ENST00000233505 MID2Q9UJV3 735 aa18.36■□□□□ 0.53
CENPA-201ENST00000233505 PCTPQ9UKL6 214 aa18.36■□□□□ 0.53
CENPA-201ENST00000233505 ANGPTL3Q9Y5C1 460 aa18.36■□□□□ 0.53
CENPA-201ENST00000233505 PCDHGA6Q9Y5G7 932 aa18.36■□□□□ 0.53
CENPA-201ENST00000233505 NBEAQ8NFP9 2946 aa18.36■□□□□ 0.53
CENPA-201ENST00000233505 SDK2Q58EX2 2172 aa18.35■□□□□ 0.53
CENPA-201ENST00000233505 LOC101059948A0A1B0GTJ6 334 aa18.35■□□□□ 0.53
CENPA-201ENST00000233505 RGS16O15492 202 aaPredicted RBP18.35■□□□□ 0.53
CENPA-201ENST00000233505 PLIN3O60664 434 aa18.35■□□□□ 0.53
CENPA-201ENST00000233505 RAB40ALP0C0E4 278 aa18.35■□□□□ 0.53
CENPA-201ENST00000233505 SLC35G6P0C7Q6 338 aa18.35■□□□□ 0.53
CENPA-201ENST00000233505 AGXTP21549 392 aa18.35■□□□□ 0.53
CENPA-201ENST00000233505 EEF1DP29692 281 aaKnown RBP18.35■□□□□ 0.53
CENPA-201ENST00000233505 HERVK_113P63132 956 aa18.35■□□□□ 0.53
CENPA-201ENST00000233505 DCDP81605 110 aaKnown RBP18.35■□□□□ 0.53
CENPA-201ENST00000233505 MEF2AQ02078 507 aaPredicted RBP18.35■□□□□ 0.53
CENPA-201ENST00000233505 CHIT1Q13231 466 aa18.35■□□□□ 0.53
CENPA-201ENST00000233505 GTF2H2Q13888 395 aa18.35■□□□□ 0.53
CENPA-201ENST00000233505 FAM53BQ14153 422 aa18.35■□□□□ 0.53
CENPA-201ENST00000233505 DOC2AQ14183 400 aa18.35■□□□□ 0.53
CENPA-201ENST00000233505 NDUFA9Q16795 377 aa18.35■□□□□ 0.53
CENPA-201ENST00000233505 HKDC1Q2TB90 917 aa18.35■□□□□ 0.53
CENPA-201ENST00000233505 XKR6Q5GH73 641 aa18.35■□□□□ 0.53
CENPA-201ENST00000233505 TNFAIP8L3Q5GJ75 292 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms