RNA–Protein interactions for RNA: ENST00000223129.8

RPA3-201, Transcript of replication protein A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA3, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-201ENST00000223129 ZNF28P17035 718 aa14.34□□□□□ -0.11
RPA3-201ENST00000223129 RBMS1P29558 406 aaKnown RBP14.34□□□□□ -0.11
RPA3-201ENST00000223129 CASP2P42575 452 aa14.34□□□□□ -0.11
RPA3-201ENST00000223129 ITGA1P56199 1179 aa14.34□□□□□ -0.11
RPA3-201ENST00000223129 RAB15P59190 212 aa14.34□□□□□ -0.11
RPA3-201ENST00000223129 PCDH1Q08174 1060 aa14.34□□□□□ -0.11
RPA3-201ENST00000223129 TRAF3Q13114 568 aa14.34□□□□□ -0.11
RPA3-201ENST00000223129 E2F2Q14209 437 aa14.34□□□□□ -0.11
RPA3-201ENST00000223129 TBCCQ15814 346 aa14.34□□□□□ -0.11
RPA3-201ENST00000223129 HKDC1Q2TB90 917 aa14.34□□□□□ -0.11
RPA3-201ENST00000223129 CFAP157Q5JU67 520 aa14.34□□□□□ -0.11
RPA3-201ENST00000223129 TMIGD1Q6UXZ0 262 aa14.34□□□□□ -0.11
RPA3-201ENST00000223129 CEACAM20Q6UY09 585 aa14.34□□□□□ -0.11
RPA3-201ENST00000223129 VN1R4Q7Z5H5 301 aa14.34□□□□□ -0.11
RPA3-201ENST00000223129 MFSD9Q8NBP5 474 aa14.34□□□□□ -0.11
RPA3-201ENST00000223129 OR4F6Q8NGB9 312 aa14.34□□□□□ -0.11
RPA3-201ENST00000223129 NTMT1Q9BV86 223 aa14.34□□□□□ -0.11
RPA3-201ENST00000223129 CACNA1AO00555 2505 aa14.33□□□□□ -0.12
RPA3-201ENST00000223129 KCNE1BA0A087WTH5 132 aa14.33□□□□□ -0.12
RPA3-201ENST00000223129 UBFD1O14562 309 aaKnown RBP14.33□□□□□ -0.12
RPA3-201ENST00000223129 P2RX6O15547 441 aa14.33□□□□□ -0.12
RPA3-201ENST00000223129 CLDN9O95484 217 aa14.33□□□□□ -0.12
RPA3-201ENST00000223129 NTRK1P04629 796 aa14.33□□□□□ -0.12
RPA3-201ENST00000223129 CXCR2P25025 360 aa14.33□□□□□ -0.12
RPA3-201ENST00000223129 SCTRP47872 440 aa14.33□□□□□ -0.12
RPA3-201ENST00000223129 SLC18A1P54219 525 aa14.33□□□□□ -0.12
RPA3-201ENST00000223129 ERVPABLB-1P60509 514 aa14.33□□□□□ -0.12
RPA3-201ENST00000223129 CYP4F2P78329 520 aa14.33□□□□□ -0.12
RPA3-201ENST00000223129 CPSF6Q16630 551 aaKnown RBP eCLIP14.33□□□□□ -0.12
RPA3-201ENST00000223129 HHATQ5VTY9 493 aa14.33□□□□□ -0.12
RPA3-201ENST00000223129 ERMP1Q7Z2K6 904 aa14.33□□□□□ -0.12
RPA3-201ENST00000223129 MILR1Q7Z6M3 343 aa14.33□□□□□ -0.12
RPA3-201ENST00000223129 GPR135Q8IZ08 494 aa14.33□□□□□ -0.12
RPA3-201ENST00000223129 KRT78Q8N1N4 520 aa14.33□□□□□ -0.12
RPA3-201ENST00000223129 ZNF655Q8N720 491 aaPredicted RBP14.33□□□□□ -0.12
RPA3-201ENST00000223129 RERGQ96A58 199 aaPredicted RBP14.33□□□□□ -0.12
RPA3-201ENST00000223129 EFCAB11Q9BUY7 163 aa14.33□□□□□ -0.12
RPA3-201ENST00000223129 SARGQ9BW04 601 aa14.33□□□□□ -0.12
RPA3-201ENST00000223129 DDA1Q9BW61 102 aa14.33□□□□□ -0.12
RPA3-201ENST00000223129 SHCBP1LQ9BZQ2 653 aa14.33□□□□□ -0.12
RPA3-201ENST00000223129 ASCL3Q9NQ33 180 aa14.33□□□□□ -0.12
RPA3-201ENST00000223129 NKIRAS1Q9NYS0 192 aa14.33□□□□□ -0.12
RPA3-201ENST00000223129 ANGPTL2Q9UKU9 493 aa14.33□□□□□ -0.12
RPA3-201ENST00000223129 ZNF749O43361 778 aa14.32□□□□□ -0.12
RPA3-201ENST00000223129 SCRG1O75711 98 aa14.32□□□□□ -0.12
RPA3-201ENST00000223129 OR4F21O95013 312 aa14.32□□□□□ -0.12
RPA3-201ENST00000223129 SERPIND1P05546 499 aa14.32□□□□□ -0.12
RPA3-201ENST00000223129 SLC5A2P31639 672 aa14.32□□□□□ -0.12
RPA3-201ENST00000223129 TMEM164Q5U3C3 297 aa14.32□□□□□ -0.12
RPA3-201ENST00000223129 LIPJQ5W064 366 aa14.32□□□□□ -0.12
RPA3-201ENST00000223129 CES4AQ5XG92 561 aa14.32□□□□□ -0.12
RPA3-201ENST00000223129 GRHL2Q6ISB3 625 aa14.32□□□□□ -0.12
RPA3-201ENST00000223129 LETMD1Q6P1Q0 360 aa14.32□□□□□ -0.12
RPA3-201ENST00000223129 FRMD7Q6ZUT3 714 aa14.32□□□□□ -0.12
RPA3-201ENST00000223129 SYVN1Q86TM6 617 aa14.32□□□□□ -0.12
RPA3-201ENST00000223129 TMEM126BQ8IUX1 230 aa14.32□□□□□ -0.12
RPA3-201ENST00000223129 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.32□□□□□ -0.12
RPA3-201ENST00000223129 L3MBTL4Q8NA19 623 aa14.32□□□□□ -0.12
RPA3-201ENST00000223129 ZNF285Q96NJ3 590 aa14.32□□□□□ -0.12
RPA3-201ENST00000223129 ASPSCR1Q9BZE9 553 aa14.32□□□□□ -0.12
RPA3-201ENST00000223129 PCDHGA3Q9Y5H0 932 aa14.32□□□□□ -0.12
RPA3-201ENST00000223129 CDRT15L2A8MXV6 281 aa14.32□□□□□ -0.12
RPA3-201ENST00000223129 OTCP00480 354 aa14.32□□□□□ -0.12
RPA3-201ENST00000223129 SNRPNP63162 240 aaKnown RBP14.32□□□□□ -0.12
RPA3-201ENST00000223129 SHC2P98077 582 aa14.32□□□□□ -0.12
RPA3-201ENST00000223129 LCP2Q13094 533 aa14.32□□□□□ -0.12
RPA3-201ENST00000223129 LAPTM5Q13571 262 aa14.32□□□□□ -0.12
RPA3-201ENST00000223129 HIST2H2ACQ16777 129 aaPredicted RBP14.32□□□□□ -0.12
RPA3-201ENST00000223129 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.32□□□□□ -0.12
RPA3-201ENST00000223129 PAGE2BQ5JRK9 111 aa14.32□□□□□ -0.12
RPA3-201ENST00000223129 TCTE1Q5JU00 501 aa14.32□□□□□ -0.12
RPA3-201ENST00000223129 HIST2H2AA3Q6FI13 130 aa14.32□□□□□ -0.12
RPA3-201ENST00000223129 CYB5D1Q6P9G0 228 aa14.32□□□□□ -0.12
RPA3-201ENST00000223129 ATG14Q6ZNE5 492 aa14.32□□□□□ -0.12
RPA3-201ENST00000223129 ASPGQ86U10 573 aa14.32□□□□□ -0.12
RPA3-201ENST00000223129 BPHLQ86WA6 291 aaPredicted RBP14.32□□□□□ -0.12
RPA3-201ENST00000223129 RNF175Q8N4F7 328 aa14.32□□□□□ -0.12
RPA3-201ENST00000223129 TBC1D19Q8N5T2 526 aa14.32□□□□□ -0.12
RPA3-201ENST00000223129 CSNK1A1LQ8N752 337 aa14.32□□□□□ -0.12
RPA3-201ENST00000223129 SLC38A9Q8NBW4 561 aa14.32□□□□□ -0.12
RPA3-201ENST00000223129 OR8K5Q8NH50 307 aa14.32□□□□□ -0.12
RPA3-201ENST00000223129 SLC13A3Q8WWT9 602 aa14.32□□□□□ -0.12
RPA3-201ENST00000223129 NXPE2Q96DL1 559 aa14.32□□□□□ -0.12
RPA3-201ENST00000223129 TM4SF19Q96DZ7 209 aa14.32□□□□□ -0.12
RPA3-201ENST00000223129 ZFP69BQ9UJL9 534 aa14.32□□□□□ -0.12
RPA3-201ENST00000223129 RUVBL1Q9Y265 456 aaKnown RBP14.32□□□□□ -0.12
RPA3-201ENST00000223129 AP1M2Q9Y6Q5 423 aa14.32□□□□□ -0.12
RPA3-201ENST00000223129 FREM2Q5SZK8 3169 aa14.32□□□□□ -0.12
RPA3-201ENST00000223129 TEX51A0A1B0GUA7 166 aa14.31□□□□□ -0.12
RPA3-201ENST00000223129 FFAR3O14843 346 aa14.31□□□□□ -0.12
RPA3-201ENST00000223129 NVLO15381 856 aaKnown RBP14.31□□□□□ -0.12
RPA3-201ENST00000223129 BIRC5O15392 142 aa14.31□□□□□ -0.12
RPA3-201ENST00000223129 GPR42O15529 346 aa14.31□□□□□ -0.12
RPA3-201ENST00000223129 ZSCAN9O15535 394 aaPredicted RBP14.31□□□□□ -0.12
RPA3-201ENST00000223129 UGDHO60701 494 aa14.31□□□□□ -0.12
RPA3-201ENST00000223129 KIAA0754O94854 1291 aa14.31□□□□□ -0.12
RPA3-201ENST00000223129 MLYCDO95822 493 aa14.31□□□□□ -0.12
RPA3-201ENST00000223129 PCNAP12004 261 aa14.31□□□□□ -0.12
RPA3-201ENST00000223129 BGNP21810 368 aa14.31□□□□□ -0.12
RPA3-201ENST00000223129 HNF4AP41235 474 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms