RNA–Protein interactions for RNA: ENST00000221494.9

SF3A2-201, Transcript of splicing factor 3a subunit 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SF3A2, Length 1,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-201ENST00000221494 GADD45AP24522 165 aa15.42■□□□□ 0.06
SF3A2-201ENST00000221494 TIE1P35590 1138 aa15.42■□□□□ 0.06
SF3A2-201ENST00000221494 GGT2P36268 569 aa15.42■□□□□ 0.06
SF3A2-201ENST00000221494 GGT5P36269 586 aa15.42■□□□□ 0.06
SF3A2-201ENST00000221494 PIK3CBP42338 1070 aa15.42■□□□□ 0.06
SF3A2-201ENST00000221494 HSPA7P48741 367 aa15.42■□□□□ 0.06
SF3A2-201ENST00000221494 CDKN1CP49918 316 aaPredicted RBP15.42■□□□□ 0.06
SF3A2-201ENST00000221494 UGT2B15P54855 530 aa15.42■□□□□ 0.06
SF3A2-201ENST00000221494 ERVFC1P60507 584 aa15.42■□□□□ 0.06
SF3A2-201ENST00000221494 AAK1Q2M2I8 961 aa15.42■□□□□ 0.06
SF3A2-201ENST00000221494 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.42■□□□□ 0.062e-8■■■■■ 33.4
SF3A2-201ENST00000221494 LYPLAL1Q5VWZ2 237 aa15.42■□□□□ 0.06
SF3A2-201ENST00000221494 LILRA6Q6PI73 481 aa15.42■□□□□ 0.06
SF3A2-201ENST00000221494 ZNF367Q7RTV3 350 aa15.42■□□□□ 0.06
SF3A2-201ENST00000221494 DNAJB7Q7Z6W7 309 aaPredicted RBP15.42■□□□□ 0.06
SF3A2-201ENST00000221494 CCDC190Q86UF4 302 aa15.42■□□□□ 0.06
SF3A2-201ENST00000221494 CCDC71Q8IV32 467 aaPredicted RBP15.42■□□□□ 0.06
SF3A2-201ENST00000221494 DEPDC4Q8N2C3 294 aa15.42■□□□□ 0.06
SF3A2-201ENST00000221494 KRTCAP2Q8N6L1 136 aa15.42■□□□□ 0.06
SF3A2-201ENST00000221494 DENND6BQ8NEG7 585 aa15.42■□□□□ 0.06
SF3A2-201ENST00000221494 HBEGFQ99075 208 aa15.42■□□□□ 0.06
SF3A2-201ENST00000221494 HTATIP2Q9BUP3 242 aa15.42■□□□□ 0.06
SF3A2-201ENST00000221494 EMILIN2Q9BXX0 1053 aa15.42■□□□□ 0.06
SF3A2-201ENST00000221494 NSUN3Q9H649 340 aaKnown RBP15.42■□□□□ 0.06
SF3A2-201ENST00000221494 SPASTQ9UBP0 616 aa15.42■□□□□ 0.06
SF3A2-201ENST00000221494 ZMYM5Q9UJ78 669 aa15.42■□□□□ 0.06
SF3A2-201ENST00000221494 MYO1GB0I1T2 1018 aa15.41■□□□□ 0.06
SF3A2-201ENST00000221494 ANKRD66B4E2M5 251 aa15.41■□□□□ 0.06
SF3A2-201ENST00000221494 TGM5O43548 720 aa15.41■□□□□ 0.06
SF3A2-201ENST00000221494 EPB42P16452 691 aa15.41■□□□□ 0.06
SF3A2-201ENST00000221494 ZNF7P17097 686 aaPredicted RBP15.41■□□□□ 0.06
SF3A2-201ENST00000221494 KDELR2P33947 212 aa15.41■□□□□ 0.06
SF3A2-201ENST00000221494 DDOSTP39656 456 aa15.41■□□□□ 0.06
SF3A2-201ENST00000221494 ZNF33BQ06732 778 aa15.41■□□□□ 0.06
SF3A2-201ENST00000221494 BOP1Q14137 746 aaKnown RBP15.41■□□□□ 0.06
SF3A2-201ENST00000221494 VEPH1Q14D04 833 aa15.41■□□□□ 0.06
SF3A2-201ENST00000221494 SMN1Q16637 294 aaKnown RBP15.41■□□□□ 0.06
SF3A2-201ENST00000221494 NEK5Q6P3R8 708 aa15.41■□□□□ 0.06
SF3A2-201ENST00000221494 GDPD3Q7L5L3 318 aa15.41■□□□□ 0.06
SF3A2-201ENST00000221494 GPR155Q7Z3F1 870 aa15.41■□□□□ 0.06
SF3A2-201ENST00000221494 ZZZ3Q8IYH5 903 aa15.41■□□□□ 0.06
SF3A2-201ENST00000221494 UBQLNLQ8IYU4 475 aa15.41■□□□□ 0.06
SF3A2-201ENST00000221494 ST13P5Q8NFI4 369 aaPredicted RBP15.41■□□□□ 0.06
SF3A2-201ENST00000221494 OR6F1Q8NGZ6 308 aa15.41■□□□□ 0.06
SF3A2-201ENST00000221494 DNASE1L2Q92874 299 aa15.41■□□□□ 0.06
SF3A2-201ENST00000221494 ULK4Q96C45 1275 aa15.41■□□□□ 0.06
SF3A2-201ENST00000221494 CMTM7Q96FZ5 175 aa15.41■□□□□ 0.06
SF3A2-201ENST00000221494 CDK5RAP1Q96SZ6 601 aaKnown RBP15.41■□□□□ 0.06
SF3A2-201ENST00000221494 BARD1Q99728 777 aaKnown RBP15.41■□□□□ 0.06
SF3A2-201ENST00000221494 NDEL1Q9GZM8 345 aa15.41■□□□□ 0.06
SF3A2-201ENST00000221494 NUAK2Q9H093 628 aa15.41■□□□□ 0.06
SF3A2-201ENST00000221494 C3orf14Q9HBI5 128 aa15.41■□□□□ 0.06
SF3A2-201ENST00000221494 ELOVL2Q9NXB9 296 aa15.41■□□□□ 0.06
SF3A2-201ENST00000221494 THUMPD1Q9NXG2 353 aaKnown RBP15.41■□□□□ 0.06
SF3A2-201ENST00000221494 WWOXQ9NZC7 414 aa15.41■□□□□ 0.06
SF3A2-201ENST00000221494 PNMA8BQ9ULN7 279 aaPredicted RBP15.41■□□□□ 0.06
SF3A2-201ENST00000221494 WBP11Q9Y2W2 641 aaKnown RBP15.41■□□□□ 0.06
SF3A2-201ENST00000221494 PCDHGB3Q9Y5G1 929 aa15.41■□□□□ 0.06
SF3A2-201ENST00000221494 PCDHGA6Q9Y5G7 932 aa15.41■□□□□ 0.06
SF3A2-201ENST00000221494 IRAK3Q9Y616 596 aa15.41■□□□□ 0.06
SF3A2-201ENST00000221494 LINC01553A4QN01 128 aa15.4■□□□□ 0.06
SF3A2-201ENST00000221494 RFXANKO14593 260 aa15.4■□□□□ 0.06
SF3A2-201ENST00000221494 PGLSO95336 258 aa15.4■□□□□ 0.06
SF3A2-201ENST00000221494 ALOX12P18054 663 aa15.4■□□□□ 0.06
SF3A2-201ENST00000221494 CTNNB1P35222 781 aa15.4■□□□□ 0.06
SF3A2-201ENST00000221494 RCVRNP35243 200 aa15.4■□□□□ 0.06
SF3A2-201ENST00000221494 ATP5C1P36542 298 aaKnown RBP15.4■□□□□ 0.06
SF3A2-201ENST00000221494 EPHB3P54753 998 aa15.4■□□□□ 0.06
SF3A2-201ENST00000221494 CDH4P55283 916 aa15.4■□□□□ 0.06
SF3A2-201ENST00000221494 C21orf58P58505 322 aa15.4■□□□□ 0.06
SF3A2-201ENST00000221494 COPZ1P61923 177 aa15.4■□□□□ 0.06
SF3A2-201ENST00000221494 CSTF3Q12996 717 aaKnown RBP15.4■□□□□ 0.06
SF3A2-201ENST00000221494 IRF3Q14653 427 aa15.4■□□□□ 0.06
SF3A2-201ENST00000221494 DUOXA1Q1HG43 343 aa15.4■□□□□ 0.06
SF3A2-201ENST00000221494 HECTD3Q5T447 861 aa15.4■□□□□ 0.06
SF3A2-201ENST00000221494 C19orf48Q6RUI8 117 aa15.4■□□□□ 0.06
SF3A2-201ENST00000221494 PMM1Q92871 262 aa15.4■□□□□ 0.06
SF3A2-201ENST00000221494 CLPBQ9H078 707 aa15.4■□□□□ 0.06
SF3A2-201ENST00000221494 RACGAP1Q9H0H5 632 aa15.4■□□□□ 0.06
SF3A2-201ENST00000221494 ZFP14Q9HCL3 533 aa15.4■□□□□ 0.06
SF3A2-201ENST00000221494 SLC6A13Q9NSD5 602 aa15.4■□□□□ 0.06
SF3A2-201ENST00000221494 TRPM5Q9NZQ8 1165 aa15.4■□□□□ 0.06
SF3A2-201ENST00000221494 KLHL42Q9P2K6 505 aa15.4■□□□□ 0.06
SF3A2-201ENST00000221494 DNMT3LQ9UJW3 386 aa15.4■□□□□ 0.06
SF3A2-201ENST00000221494 CORO2BQ9UQ03 480 aa15.4■□□□□ 0.06
SF3A2-201ENST00000221494 PDZK1P1A8MUH7 402 aa15.4■□□□□ 0.06
SF3A2-201ENST00000221494 KMOO15229 486 aa15.4■□□□□ 0.06
SF3A2-201ENST00000221494 CAPN5O15484 640 aaPredicted RBP15.4■□□□□ 0.06
SF3A2-201ENST00000221494 COCHO43405 550 aa15.4■□□□□ 0.06
SF3A2-201ENST00000221494 UGT2B17O75795 530 aa15.4■□□□□ 0.06
SF3A2-201ENST00000221494 CLDN9O95484 217 aa15.4■□□□□ 0.06
SF3A2-201ENST00000221494 HMBSP08397 361 aa15.4■□□□□ 0.06
SF3A2-201ENST00000221494 SPNP16150 400 aa15.4■□□□□ 0.06
SF3A2-201ENST00000221494 PPIBP23284 216 aaKnown RBP15.4■□□□□ 0.06
SF3A2-201ENST00000221494 ALDH9A1P49189 494 aa15.4■□□□□ 0.06
SF3A2-201ENST00000221494 SEPHS1P49903 392 aa15.4■□□□□ 0.06
SF3A2-201ENST00000221494 HMGCS1Q01581 520 aa15.4■□□□□ 0.06
SF3A2-201ENST00000221494 IL1RL1Q01638 556 aa15.4■□□□□ 0.06
SF3A2-201ENST00000221494 SRSF11Q05519 484 aaKnown RBP15.4■□□□□ 0.06
SF3A2-201ENST00000221494 PLD1Q13393 1074 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms