RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 DNAJB7Q7Z6W7 309 aaPredicted RBP16.69■□□□□ 0.26
USB1-201ENST00000219281 SYNPOQ8N3V7 929 aa16.69■□□□□ 0.26
USB1-201ENST00000219281 RHOXF1Q8NHV9 184 aa16.69■□□□□ 0.26
USB1-201ENST00000219281 SLC38A4Q969I6 547 aa16.69■□□□□ 0.26
USB1-201ENST00000219281 TRMT2BQ96GJ1 504 aaKnown RBP16.69■□□□□ 0.26
USB1-201ENST00000219281 FCRL1Q96LA6 429 aa16.69■□□□□ 0.26
USB1-201ENST00000219281 SIGLEC11Q96RL6 698 aa16.69■□□□□ 0.26
USB1-201ENST00000219281 ITPAQ9BY32 194 aa16.69■□□□□ 0.26
USB1-201ENST00000219281 DCSTAMPQ9H295 470 aa16.69■□□□□ 0.26
USB1-201ENST00000219281 TPT1P8Q9HAU6 139 aa16.69■□□□□ 0.26
USB1-201ENST00000219281 ZBTB20Q9HC78 741 aaPredicted RBP16.69■□□□□ 0.26
USB1-201ENST00000219281 PRDM8Q9NQV8 689 aa16.69■□□□□ 0.26
USB1-201ENST00000219281 ZNF451Q9Y4E5 1061 aa16.69■□□□□ 0.26
USB1-201ENST00000219281 PCDHGA6Q9Y5G7 932 aa16.69■□□□□ 0.26
USB1-201ENST00000219281 NUAK1O60285 661 aa16.68■□□□□ 0.26
USB1-201ENST00000219281 SH3BGRLO75368 114 aa16.68■□□□□ 0.26
USB1-201ENST00000219281 CD22P20273 847 aa16.68■□□□□ 0.26
USB1-201ENST00000219281 LHCGRP22888 699 aa16.68■□□□□ 0.26
USB1-201ENST00000219281 CD40LGP29965 261 aa16.68■□□□□ 0.26
USB1-201ENST00000219281 RRM2P31350 389 aa16.68■□□□□ 0.26
USB1-201ENST00000219281 PPP5CP53041 499 aa16.68■□□□□ 0.26
USB1-201ENST00000219281 PTPN5P54829 565 aa16.68■□□□□ 0.26
USB1-201ENST00000219281 PFN3P60673 137 aa16.68■□□□□ 0.26
USB1-201ENST00000219281 DEFB103AP81534 67 aa16.68■□□□□ 0.26
USB1-201ENST00000219281 VEPH1Q14D04 833 aa16.68■□□□□ 0.26
USB1-201ENST00000219281 LRRC73Q5JTD7 316 aa16.68■□□□□ 0.26
USB1-201ENST00000219281 SERPINA13PQ6UXR4 307 aa16.68■□□□□ 0.26
USB1-201ENST00000219281 Q6ZNB5 142 aa16.68■□□□□ 0.26
USB1-201ENST00000219281 P3H2Q8IVL5 708 aa16.68■□□□□ 0.26
USB1-201ENST00000219281 OR2AP1Q8NGE2 309 aa16.68■□□□□ 0.26
USB1-201ENST00000219281 OR8J2Q8NGG1 315 aa16.68■□□□□ 0.26
USB1-201ENST00000219281 MAL2Q969L2 176 aa16.68■□□□□ 0.26
USB1-201ENST00000219281 SCRN2Q96FV2 425 aa16.68■□□□□ 0.26
USB1-201ENST00000219281 C7orf34Q96L11 122 aa16.68■□□□□ 0.26
USB1-201ENST00000219281 LYSMD1Q96S90 227 aa16.68■□□□□ 0.26
USB1-201ENST00000219281 COPS4Q9BT78 406 aa16.68■□□□□ 0.26
USB1-201ENST00000219281 RUBCNLQ9H714 662 aa16.68■□□□□ 0.26
USB1-201ENST00000219281 RC3H2Q9HBD1 1191 aaKnown RBP16.68■□□□□ 0.26
USB1-201ENST00000219281 FAM120CQ9NX05 1096 aaKnown RBP16.68■□□□□ 0.26
USB1-201ENST00000219281 VPS29Q9UBQ0 182 aa16.68■□□□□ 0.26
USB1-201ENST00000219281 CD84Q9UIB8 345 aa16.68■□□□□ 0.26
USB1-201ENST00000219281 FZD4Q9ULV1 537 aa16.68■□□□□ 0.26
USB1-201ENST00000219281 PCDHB11Q9Y5F2 797 aa16.68■□□□□ 0.26
USB1-201ENST00000219281 SERTM1A2A2V5 107 aa16.68■□□□□ 0.26
USB1-201ENST00000219281 EIF3FO00303 357 aaPredicted RBP16.68■□□□□ 0.26
USB1-201ENST00000219281 MTX2O75431 263 aa16.68■□□□□ 0.26
USB1-201ENST00000219281 CYP2A7P20853 494 aa16.68■□□□□ 0.26
USB1-201ENST00000219281 ITGB8P26012 769 aa16.68■□□□□ 0.26
USB1-201ENST00000219281 C21orf33P30042 268 aaPredicted RBP16.68■□□□□ 0.26
USB1-201ENST00000219281 CD70P32970 193 aa16.68■□□□□ 0.26
USB1-201ENST00000219281 CTSOP43234 321 aaPredicted RBP16.68■□□□□ 0.26
USB1-201ENST00000219281 STK19P49842 368 aaPredicted RBP16.68■□□□□ 0.26
USB1-201ENST00000219281 CRYBA2P53672 197 aa16.68■□□□□ 0.26
USB1-201ENST00000219281 KCNJ10P78508 379 aa16.68■□□□□ 0.26
USB1-201ENST00000219281 IRF8Q02556 426 aa16.68■□□□□ 0.26
USB1-201ENST00000219281 RAB33AQ14088 237 aa16.68■□□□□ 0.26
USB1-201ENST00000219281 PROX1Q92786 737 aa16.68■□□□□ 0.26
USB1-201ENST00000219281 TMEM169Q96HH4 297 aa16.68■□□□□ 0.26
USB1-201ENST00000219281 EPS8L2Q9H6S3 715 aa16.68■□□□□ 0.26
USB1-201ENST00000219281 AMBNQ9NP70 447 aa16.68■□□□□ 0.26
USB1-201ENST00000219281 SCHIP1Q9P0W5 487 aaPredicted RBP16.68■□□□□ 0.26
USB1-201ENST00000219281 TMPRSS11EQ9UL52 423 aa16.68■□□□□ 0.26
USB1-201ENST00000219281 NUP214P35658 2090 aaPredicted RBP16.67■□□□□ 0.26
USB1-201ENST00000219281 A0A1W2PQ67 120 aa16.67■□□□□ 0.26
USB1-201ENST00000219281 E9PQ18 207 aa16.67■□□□□ 0.26
USB1-201ENST00000219281 GFYI3L273 518 aa16.67■□□□□ 0.26
USB1-201ENST00000219281 PRMT3O60678 531 aa16.67■□□□□ 0.26
USB1-201ENST00000219281 COQ9O75208 318 aa16.67■□□□□ 0.26
USB1-201ENST00000219281 MPC1LP0DKB6 136 aa16.67■□□□□ 0.26
USB1-201ENST00000219281 PCSK2P16519 638 aa16.67■□□□□ 0.26
USB1-201ENST00000219281 VEZF1Q14119 521 aa16.67■□□□□ 0.26
USB1-201ENST00000219281 XKR6Q5GH73 641 aa16.67■□□□□ 0.26
USB1-201ENST00000219281 VOPP1Q96AW1 172 aa16.67■□□□□ 0.26
USB1-201ENST00000219281 HRASLS5Q96KN8 279 aa16.67■□□□□ 0.26
USB1-201ENST00000219281 ZNF558Q96NG5 402 aa16.67■□□□□ 0.26
USB1-201ENST00000219281 EPYCQ99645 322 aa16.67■□□□□ 0.26
USB1-201ENST00000219281 DUSP26Q9BV47 211 aa16.67■□□□□ 0.26
USB1-201ENST00000219281 ZNF106Q9H2Y7 1883 aaKnown RBP16.67■□□□□ 0.26
USB1-201ENST00000219281 ZNF334Q9HCZ1 680 aaPredicted RBP16.67■□□□□ 0.26
USB1-201ENST00000219281 ABCB8Q9NUT2 735 aa16.67■□□□□ 0.26
USB1-201ENST00000219281 FAM8A1Q9UBU6 413 aa16.67■□□□□ 0.26
USB1-201ENST00000219281 ATP11BQ9Y2G3 1177 aa16.67■□□□□ 0.26
USB1-201ENST00000219281 IGLV3-16A0A075B6K0 115 aa16.67■□□□□ 0.26
USB1-201ENST00000219281 M0R082 166 aa16.67■□□□□ 0.26
USB1-201ENST00000219281 SUV39H1O43463 412 aa16.67■□□□□ 0.26
USB1-201ENST00000219281 AIREO43918 545 aa16.67■□□□□ 0.26
USB1-201ENST00000219281 NTRK1P04629 796 aa16.67■□□□□ 0.26
USB1-201ENST00000219281 NEK10Q6ZWH5 1172 aa16.67■□□□□ 0.26
USB1-201ENST00000219281 USP45Q70EL2 814 aa16.67■□□□□ 0.26
USB1-201ENST00000219281 CPA6Q8N4T0 437 aa16.67■□□□□ 0.26
USB1-201ENST00000219281 PRM3Q9NNZ6 103 aa16.67■□□□□ 0.26
USB1-201ENST00000219281 ABCB10Q9NRK6 738 aa16.67■□□□□ 0.26
USB1-201ENST00000219281 TMEM39AQ9NV64 488 aa16.67■□□□□ 0.26
USB1-201ENST00000219281 TMEM184CQ9NVA4 438 aa16.67■□□□□ 0.26
USB1-201ENST00000219281 SLCO3A1Q9UIG8 710 aa16.67■□□□□ 0.26
USB1-201ENST00000219281 ZNF229Q9UJW7 825 aa16.67■□□□□ 0.26
USB1-201ENST00000219281 PRRG1O14668 218 aa16.66■□□□□ 0.26
USB1-201ENST00000219281 C1SP09871 688 aa16.66■□□□□ 0.26
USB1-201ENST00000219281 ATP1B2P14415 290 aaPredicted RBP16.66■□□□□ 0.26
USB1-201ENST00000219281 SLC19A1P41440 591 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms