RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 DEFB103AP81534 67 aa14.58□□□□□ -0.08
EFNB1-201ENST00000204961 COQ5Q5HYK3 327 aa14.58□□□□□ -0.08
EFNB1-201ENST00000204961 ASTLQ6HA08 431 aaPredicted RBP14.58□□□□□ -0.08
EFNB1-201ENST00000204961 CFAP206Q8IYR0 622 aa14.58□□□□□ -0.08
EFNB1-201ENST00000204961 PAPD5Q8NDF8 572 aaKnown RBP14.58□□□□□ -0.08
EFNB1-201ENST00000204961 OR4A15Q8NGL6 344 aa14.58□□□□□ -0.08
EFNB1-201ENST00000204961 MCFD2Q8NI22 146 aa14.58□□□□□ -0.08
EFNB1-201ENST00000204961 ADAMTS19Q8TE59 1207 aa14.58□□□□□ -0.08
EFNB1-201ENST00000204961 HDAC2Q92769 488 aaKnown RBP14.58□□□□□ -0.08
EFNB1-201ENST00000204961 RAB8BQ92930 207 aa14.58□□□□□ -0.08
EFNB1-201ENST00000204961 PEX13Q92968 403 aa14.58□□□□□ -0.08
EFNB1-201ENST00000204961 ZNF641Q96N77 438 aaPredicted RBP14.58□□□□□ -0.08
EFNB1-201ENST00000204961 CPPED1Q9BRF8 314 aaPredicted RBP14.58□□□□□ -0.08
EFNB1-201ENST00000204961 HMX1Q9NP08 348 aaPredicted RBP14.58□□□□□ -0.08
EFNB1-201ENST00000204961 DNAJC11Q9NVH1 559 aa14.58□□□□□ -0.08
EFNB1-201ENST00000204961 C14orf119Q9NWQ9 140 aa14.58□□□□□ -0.08
EFNB1-201ENST00000204961 GIN1Q9NXP7 522 aa14.58□□□□□ -0.08
EFNB1-201ENST00000204961 TTC34A8MYJ7 566 aa14.58□□□□□ -0.08
EFNB1-201ENST00000204961 URODP06132 367 aa14.58□□□□□ -0.08
EFNB1-201ENST00000204961 AOAHP28039 575 aa14.58□□□□□ -0.08
EFNB1-201ENST00000204961 GSTM2P28161 218 aa14.58□□□□□ -0.08
EFNB1-201ENST00000204961 TGM4P49221 684 aa14.58□□□□□ -0.08
EFNB1-201ENST00000204961 PCYT1AP49585 367 aa14.58□□□□□ -0.08
EFNB1-201ENST00000204961 ST13P50502 369 aaKnown RBP14.58□□□□□ -0.08
EFNB1-201ENST00000204961 NKX3-2P78367 333 aa14.58□□□□□ -0.08
EFNB1-201ENST00000204961 SREBF2Q12772 1141 aa14.58□□□□□ -0.08
EFNB1-201ENST00000204961 CELF5Q8N6W0 485 aaKnown RBP14.58□□□□□ -0.08
EFNB1-201ENST00000204961 PLD4Q96BZ4 506 aa14.58□□□□□ -0.08
EFNB1-201ENST00000204961 OR51E2Q9H255 320 aa14.58□□□□□ -0.08
EFNB1-201ENST00000204961 WNT6Q9Y6F9 365 aa14.58□□□□□ -0.08
EFNB1-201ENST00000204961 SCN3AQ9NY46 2000 aa14.57□□□□□ -0.08
EFNB1-201ENST00000204961 GABRR3A8MPY1 467 aa14.57□□□□□ -0.08
EFNB1-201ENST00000204961 LATO43561 262 aa14.57□□□□□ -0.08
EFNB1-201ENST00000204961 RGS10O43665 173 aa14.57□□□□□ -0.08
EFNB1-201ENST00000204961 CKMT1AP12532 417 aa14.57□□□□□ -0.08
EFNB1-201ENST00000204961 SMARCB1Q12824 385 aa14.57□□□□□ -0.08
EFNB1-201ENST00000204961 MAD2L1Q13257 205 aaPredicted RBP14.57□□□□□ -0.08
EFNB1-201ENST00000204961 GAB1Q13480 694 aa14.57□□□□□ -0.08
EFNB1-201ENST00000204961 GBX1Q14549 363 aa14.57□□□□□ -0.08
EFNB1-201ENST00000204961 GRIN2CQ14957 1233 aa14.57□□□□□ -0.08
EFNB1-201ENST00000204961 GTF2IRD2BQ6EKJ0 949 aa14.57□□□□□ -0.08
EFNB1-201ENST00000204961 GTF2IRD2Q86UP8 949 aa14.57□□□□□ -0.08
EFNB1-201ENST00000204961 ALDH16A1Q8IZ83 802 aa14.57□□□□□ -0.08
EFNB1-201ENST00000204961 COPS4Q9BT78 406 aa14.57□□□□□ -0.08
EFNB1-201ENST00000204961 DUSP26Q9BV47 211 aa14.57□□□□□ -0.08
EFNB1-201ENST00000204961 C11orf16Q9NQ32 467 aa14.57□□□□□ -0.08
EFNB1-201ENST00000204961 C6orf47O95873 294 aa14.57□□□□□ -0.08
EFNB1-201ENST00000204961 TTKP33981 857 aa14.57□□□□□ -0.08
EFNB1-201ENST00000204961 LIPAP38571 399 aa14.57□□□□□ -0.08
EFNB1-201ENST00000204961 GJA8P48165 433 aa14.57□□□□□ -0.08
EFNB1-201ENST00000204961 CTF1Q16619 201 aa14.57□□□□□ -0.08
EFNB1-201ENST00000204961 VMACQ2NL98 169 aa14.57□□□□□ -0.08
EFNB1-201ENST00000204961 HIPK1Q86Z02 1210 aa14.57□□□□□ -0.08
EFNB1-201ENST00000204961 CCDC71Q8IV32 467 aaPredicted RBP14.57□□□□□ -0.08
EFNB1-201ENST00000204961 SLC5A8Q8N695 610 aa14.57□□□□□ -0.08
EFNB1-201ENST00000204961 FAM83FQ8NEG4 500 aaPredicted RBP14.57□□□□□ -0.08
EFNB1-201ENST00000204961 LGALS12Q96DT0 336 aa14.57□□□□□ -0.08
EFNB1-201ENST00000204961 ZFYVE19Q96K21 471 aa14.57□□□□□ -0.08
EFNB1-201ENST00000204961 PHOX2BQ99453 314 aa14.57□□□□□ -0.08
EFNB1-201ENST00000204961 SIAEQ9HAT2 523 aa14.57□□□□□ -0.08
EFNB1-201ENST00000204961 TMPRSS11EQ9UL52 423 aa14.57□□□□□ -0.08
EFNB1-201ENST00000204961 FZD6O60353 706 aa14.56□□□□□ -0.08
EFNB1-201ENST00000204961 GADD45AP24522 165 aa14.56□□□□□ -0.08
EFNB1-201ENST00000204961 CHI3L1P36222 383 aaPredicted RBP14.56□□□□□ -0.08
EFNB1-201ENST00000204961 PRKAG1P54619 331 aa14.56□□□□□ -0.08
EFNB1-201ENST00000204961 ELAVL2Q12926 359 aaKnown RBP14.56□□□□□ -0.08
EFNB1-201ENST00000204961 RPS26P11Q5JNZ5 115 aaPredicted RBP14.56□□□□□ -0.08
EFNB1-201ENST00000204961 CPTPQ5TA50 214 aa14.56□□□□□ -0.08
EFNB1-201ENST00000204961 ZNF691Q5VV52 312 aa14.56□□□□□ -0.08
EFNB1-201ENST00000204961 ADCK2Q7Z695 626 aa14.56□□□□□ -0.08
EFNB1-201ENST00000204961 GPR149Q86SP6 731 aa14.56□□□□□ -0.08
EFNB1-201ENST00000204961 THOC6Q86W42 341 aaKnown RBP14.56□□□□□ -0.08
EFNB1-201ENST00000204961 NFKBIDQ8NI38 313 aa14.56□□□□□ -0.08
EFNB1-201ENST00000204961 ZNF420Q8TAQ5 688 aaPredicted RBP14.56□□□□□ -0.08
EFNB1-201ENST00000204961 TSPEARQ8WU66 669 aa14.56□□□□□ -0.08
EFNB1-201ENST00000204961 TMEM159Q96B96 161 aa14.56□□□□□ -0.08
EFNB1-201ENST00000204961 YIPF4Q9BSR8 244 aa14.56□□□□□ -0.08
EFNB1-201ENST00000204961 TSEN34Q9BSV6 310 aaKnown RBP14.56□□□□□ -0.08
EFNB1-201ENST00000204961 IMPAD1Q9NX62 359 aa14.56□□□□□ -0.08
EFNB1-201ENST00000204961 SH2B3Q9UQQ2 575 aa14.56□□□□□ -0.08
EFNB1-201ENST00000204961 ERGIC3Q9Y282 383 aa14.56□□□□□ -0.08
EFNB1-201ENST00000204961 TMA7Q9Y2S6 64 aaKnown RBP14.56□□□□□ -0.08
EFNB1-201ENST00000204961 GPC6Q9Y625 555 aaPredicted RBP14.56□□□□□ -0.08
EFNB1-201ENST00000204961 EFCAB9A8MZ26 197 aa14.56□□□□□ -0.08
EFNB1-201ENST00000204961 WASH3PC4AMC7 463 aa14.56□□□□□ -0.08
EFNB1-201ENST00000204961 CNOT3O75175 753 aaKnown RBP14.56□□□□□ -0.08
EFNB1-201ENST00000204961 KCNK5O95279 499 aa14.56□□□□□ -0.08
EFNB1-201ENST00000204961 TMBIM6P55061 237 aa14.56□□□□□ -0.08
EFNB1-201ENST00000204961 CLDN8P56748 225 aa14.56□□□□□ -0.08
EFNB1-201ENST00000204961 NIPAL1Q6NVV3 410 aa14.56□□□□□ -0.08
EFNB1-201ENST00000204961 TMEM220Q6QAJ8 160 aa14.56□□□□□ -0.08
EFNB1-201ENST00000204961 USP45Q70EL2 814 aa14.56□□□□□ -0.08
EFNB1-201ENST00000204961 STX19Q8N4C7 294 aa14.56□□□□□ -0.08
EFNB1-201ENST00000204961 TMEM203Q969S6 136 aa14.56□□□□□ -0.08
EFNB1-201ENST00000204961 GORASP2Q9H8Y8 452 aa14.56□□□□□ -0.08
EFNB1-201ENST00000204961 ZDHHC3Q9NYG2 299 aa14.56□□□□□ -0.08
EFNB1-201ENST00000204961 VPS29Q9UBQ0 182 aa14.56□□□□□ -0.08
EFNB1-201ENST00000204961 MOSPD1Q9UJG1 213 aa14.56□□□□□ -0.08
EFNB1-201ENST00000204961 INSL5Q9Y5Q6 135 aa14.56□□□□□ -0.08
EFNB1-201ENST00000204961 SUV39H1O43463 412 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms