RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 AASDHPPTQ9NRN7 309 aa7.97□□□□□ -1.13
VAMP3-201ENST00000054666 SH3BP4Q9P0V3 963 aa7.97□□□□□ -1.13
VAMP3-201ENST00000054666 IFT80Q9P2H3 777 aaPredicted RBP7.97□□□□□ -1.13
VAMP3-201ENST00000054666 BTNL2Q9UIR0 455 aa7.97□□□□□ -1.13
VAMP3-201ENST00000054666 C3orf18Q9UK00 162 aa7.97□□□□□ -1.13
VAMP3-201ENST00000054666 BAG5Q9UL15 447 aa7.97□□□□□ -1.13
VAMP3-201ENST00000054666 VPS4AQ9UN37 437 aa7.97□□□□□ -1.13
VAMP3-201ENST00000054666 PCDHB11Q9Y5F2 797 aa7.97□□□□□ -1.13
VAMP3-201ENST00000054666 KIF26AQ9ULI4 1882 aaPredicted RBP7.96□□□□□ -1.14
VAMP3-201ENST00000054666 VILLO15195 856 aa7.96□□□□□ -1.14
VAMP3-201ENST00000054666 PCDH8O95206 1070 aa7.96□□□□□ -1.14
VAMP3-201ENST00000054666 LAMP1P11279 417 aa7.96□□□□□ -1.14
VAMP3-201ENST00000054666 NPPBP16860 134 aa7.96□□□□□ -1.14
VAMP3-201ENST00000054666 GPX2P18283 190 aa7.96□□□□□ -1.14
VAMP3-201ENST00000054666 FCARP24071 287 aa7.96□□□□□ -1.14
VAMP3-201ENST00000054666 EIF2DP41214 584 aaKnown RBP7.96□□□□□ -1.14
VAMP3-201ENST00000054666 ALDH3B2P48448 385 aa7.96□□□□□ -1.14
VAMP3-201ENST00000054666 ARHGDIAP52565 204 aa7.96□□□□□ -1.14
VAMP3-201ENST00000054666 CDH15P55291 814 aa7.96□□□□□ -1.14
VAMP3-201ENST00000054666 WNT3P56703 355 aa7.96□□□□□ -1.14
VAMP3-201ENST00000054666 RAE1P78406 368 aaKnown RBP7.96□□□□□ -1.14
VAMP3-201ENST00000054666 ADARB1P78563 741 aaKnown RBP7.96□□□□□ -1.14
VAMP3-201ENST00000054666 CDK3Q00526 305 aa7.96□□□□□ -1.14
VAMP3-201ENST00000054666 TAP2Q03519 686 aa7.96□□□□□ -1.14
VAMP3-201ENST00000054666 FCHO2Q0JRZ9 810 aa7.96□□□□□ -1.14
VAMP3-201ENST00000054666 SLC14A1Q13336 389 aa7.96□□□□□ -1.14
VAMP3-201ENST00000054666 CAMK2GQ13555 558 aaPredicted RBP7.96□□□□□ -1.14
VAMP3-201ENST00000054666 SF1Q15637 639 aaKnown RBP7.96□□□□□ -1.14
VAMP3-201ENST00000054666 RFX4Q33E94 735 aa7.96□□□□□ -1.14
VAMP3-201ENST00000054666 ZIK1Q3SY52 487 aaPredicted RBP7.96□□□□□ -1.14
VAMP3-201ENST00000054666 CCNYL2Q5T2Q4 361 aa7.96□□□□□ -1.14
VAMP3-201ENST00000054666 PIP5KL1Q5T9C9 394 aa7.96□□□□□ -1.14
VAMP3-201ENST00000054666 EGFLAMQ63HQ2 1017 aa7.96□□□□□ -1.14
VAMP3-201ENST00000054666 CWF19L1Q69YN2 538 aaKnown RBP7.96□□□□□ -1.14
VAMP3-201ENST00000054666 FAM109BQ6ICB4 259 aaPredicted RBP7.96□□□□□ -1.14
VAMP3-201ENST00000054666 TANGO2Q6ICL3 276 aa7.96□□□□□ -1.14
VAMP3-201ENST00000054666 GALNT18Q6P9A2 607 aa7.96□□□□□ -1.14
VAMP3-201ENST00000054666 NXPE4Q6UWF7 544 aa7.96□□□□□ -1.14
VAMP3-201ENST00000054666 USP51Q70EK9 711 aa7.96□□□□□ -1.14
VAMP3-201ENST00000054666 ZDHHC21Q8IVQ6 265 aa7.96□□□□□ -1.14
VAMP3-201ENST00000054666 SFTPA1Q8IWL2 248 aa7.96□□□□□ -1.14
VAMP3-201ENST00000054666 LAS2Q8IYD9 372 aa7.96□□□□□ -1.14
VAMP3-201ENST00000054666 ZZZ3Q8IYH5 903 aa7.96□□□□□ -1.14
VAMP3-201ENST00000054666 CHPFQ8IZ52 775 aa7.96□□□□□ -1.14
VAMP3-201ENST00000054666 C8orf59Q8N0T1 100 aaPredicted RBP7.96□□□□□ -1.14
VAMP3-201ENST00000054666 KRT78Q8N1N4 520 aa7.96□□□□□ -1.14
VAMP3-201ENST00000054666 C10orf111Q8N326 155 aa7.96□□□□□ -1.14
VAMP3-201ENST00000054666 OR4A15Q8NGL6 344 aa7.96□□□□□ -1.14
VAMP3-201ENST00000054666 ZFP28Q8NHY6 868 aa7.96□□□□□ -1.14
VAMP3-201ENST00000054666 PNPT1Q8TCS8 783 aaKnown RBP7.96□□□□□ -1.14
VAMP3-201ENST00000054666 ERLEC1Q96DZ1 483 aa7.96□□□□□ -1.14
VAMP3-201ENST00000054666 BHLHE41Q9C0J9 482 aaPredicted RBP7.96□□□□□ -1.14
VAMP3-201ENST00000054666 SOX17Q9H6I2 414 aaPredicted RBP7.96□□□□□ -1.14
VAMP3-201ENST00000054666 TPT1P8Q9HAU6 139 aa7.96□□□□□ -1.14
VAMP3-201ENST00000054666 ZDHHC4Q9NPG8 344 aa7.96□□□□□ -1.14
VAMP3-201ENST00000054666 USE1Q9NZ43 259 aa7.96□□□□□ -1.14
VAMP3-201ENST00000054666 RSL24D1Q9UHA3 163 aaKnown RBP7.96□□□□□ -1.14
VAMP3-201ENST00000054666 CDH7Q9ULB5 785 aa7.96□□□□□ -1.14
VAMP3-201ENST00000054666 PCM1Q15154 2024 aa7.96□□□□□ -1.14
VAMP3-201ENST00000054666 RNASET2O00584 256 aaKnown RBP7.95□□□□□ -1.14
VAMP3-201ENST00000054666 HS6ST1O60243 411 aa7.95□□□□□ -1.14
VAMP3-201ENST00000054666 SCN2BO60939 215 aa7.95□□□□□ -1.14
VAMP3-201ENST00000054666 ADH1BP00325 375 aa7.95□□□□□ -1.14
VAMP3-201ENST00000054666 ACADLP28330 430 aa7.95□□□□□ -1.14
VAMP3-201ENST00000054666 RAD23AP54725 363 aa7.95□□□□□ -1.14
VAMP3-201ENST00000054666 NAIF1Q69YI7 327 aaPredicted RBP7.95□□□□□ -1.14
VAMP3-201ENST00000054666 PNCKQ6P2M8 343 aa7.95□□□□□ -1.14
VAMP3-201ENST00000054666 LCTLQ6UWM7 567 aa7.95□□□□□ -1.14
VAMP3-201ENST00000054666 ANGPTL8Q6UXH0 198 aa7.95□□□□□ -1.14
VAMP3-201ENST00000054666 LPCAT2Q7L5N7 544 aa7.95□□□□□ -1.14
VAMP3-201ENST00000054666 COMMD6Q7Z4G1 85 aa7.95□□□□□ -1.14
VAMP3-201ENST00000054666 HORMAD1Q86X24 394 aa7.95□□□□□ -1.14
VAMP3-201ENST00000054666 ALDH16A1Q8IZ83 802 aa7.95□□□□□ -1.14
VAMP3-201ENST00000054666 PGBD3Q8N328 593 aa7.95□□□□□ -1.14
VAMP3-201ENST00000054666 RAB42Q8N4Z0 105 aa7.95□□□□□ -1.14
VAMP3-201ENST00000054666 SETD7Q8WTS6 366 aaKnown RBP7.95□□□□□ -1.14
VAMP3-201ENST00000054666 TFGQ92734 400 aaPredicted RBP7.95□□□□□ -1.14
VAMP3-201ENST00000054666 COX14Q96I36 57 aa7.95□□□□□ -1.14
VAMP3-201ENST00000054666 OSBPL10Q9BXB5 764 aa7.95□□□□□ -1.14
VAMP3-201ENST00000054666 ZDHHC5Q9C0B5 715 aa7.95□□□□□ -1.14
VAMP3-201ENST00000054666 OR52A5Q9H2C5 316 aa7.95□□□□□ -1.14
VAMP3-201ENST00000054666 TOR3AQ9H497 397 aa7.95□□□□□ -1.14
VAMP3-201ENST00000054666 IGFLR1Q9H665 355 aa7.95□□□□□ -1.14
VAMP3-201ENST00000054666 REEP4Q9H6H4 257 aa7.95□□□□□ -1.14
VAMP3-201ENST00000054666 TDRKHQ9Y2W6 561 aaKnown RBP7.95□□□□□ -1.14
VAMP3-201ENST00000054666 TMEM98Q9Y2Y6 226 aa7.95□□□□□ -1.14
VAMP3-201ENST00000054666 PRKAB1Q9Y478 270 aa7.95□□□□□ -1.14
VAMP3-201ENST00000054666 AP1M2Q9Y6Q5 423 aa7.95□□□□□ -1.14
VAMP3-201ENST00000054666 ATG2AQ2TAZ0 1938 aa7.95□□□□□ -1.14
VAMP3-201ENST00000054666 LAMA3Q16787 3333 aa7.95□□□□□ -1.14
VAMP3-201ENST00000054666 KLHL33A6NCF5 533 aa7.95□□□□□ -1.14
VAMP3-201ENST00000054666 GABRR3A8MPY1 467 aa7.95□□□□□ -1.14
VAMP3-201ENST00000054666 MID1O15344 667 aa7.95□□□□□ -1.14
VAMP3-201ENST00000054666 FABP3P05413 133 aa7.95□□□□□ -1.14
VAMP3-201ENST00000054666 SLC35G4P0C7Q5 338 aa7.95□□□□□ -1.14
VAMP3-201ENST00000054666 EEF1B2P24534 225 aaKnown RBP7.95□□□□□ -1.14
VAMP3-201ENST00000054666 TTKP33981 857 aa7.95□□□□□ -1.14
VAMP3-201ENST00000054666 HSD17B2P37059 387 aa7.95□□□□□ -1.14
VAMP3-201ENST00000054666 PIK3CBP42338 1070 aa7.95□□□□□ -1.14
VAMP3-201ENST00000054666 MAGEA2P43356 314 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms