RNA–Protein interactions for RNA: ENSMUST00000034713.8

Ldlr-201, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,627 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-201ENSMUST00000034713 Gm7929A0A286YDV3 213 aa9.66□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Hist1h2abC0HKE1 130 aa9.66□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Hist1h2acC0HKE2 130 aa9.66□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Hist1h2adC0HKE3 130 aa9.66□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Hist1h2aeC0HKE4 130 aa9.66□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Hist1h2agC0HKE5 130 aa9.66□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Hist1h2aiC0HKE6 130 aa9.66□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Hist1h2anC0HKE7 130 aa9.66□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Hist1h2aoC0HKE8 130 aa9.66□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Hist1h2apC0HKE9 130 aa9.66□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Gm21977F6U3N7 213 aa9.66□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Gm8247F6VRJ8 213 aa9.66□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Gm8005F6YKY3 213 aa9.66□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Gm3015F6ZAP6 213 aa9.66□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Gm8212F6ZMY5 213 aa9.66□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Gm7954F7BAX1 213 aa9.66□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Gm8138F7BY56 213 aa9.66□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Gm8232F7CFJ3 213 aa9.66□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Gm17079F7D8Y4 213 aa9.66□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Bbip1J3QMK2 67 aa9.66□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Smim22J3QP37 91 aa9.66□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Gm8094K7N6U8 211 aa9.66□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Gm8165L7N218 213 aa9.66□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Gm8122L7N2C7 213 aa9.66□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Gm17078M0QW51 211 aa9.66□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Mab21l1O70299 359 aa9.66□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Cyp1a1P00184 524 aa9.66□□□□□ -0.86
Ldlr-201ENSMUST00000034713 CrtamQ149L7 389 aa9.66□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Pyroxd2Q3U4I7 581 aa9.66□□□□□ -0.86
Ldlr-201ENSMUST00000034713 P2rx3Q3UR32 397 aa9.66□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Tmed3Q78IS1 221 aa9.66□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Scn4bQ7M729 228 aa9.66□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Arl5aQ80ZU0 179 aa9.66□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Hist3h2aQ8BFU2 130 aaKnown RBP9.66□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Susd6Q8BGE4 302 aa9.66□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Sec22cQ8BXT9 303 aa9.66□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Gpr22Q8BZL4 432 aa9.66□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Galnt13Q8CF93 556 aa9.66□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Crispld1Q8CGD2 500 aa9.66□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Hist1h2afQ8CGP5 130 aa9.66□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Hist1h2ahQ8CGP6 128 aa9.66□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Hist1h2akQ8CGP7 130 aa9.66□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Irak3Q8K4B2 609 aa9.66□□□□□ -0.86
Ldlr-201ENSMUST00000034713 H2afjQ8R1M2 129 aa9.66□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Olfr273Q8VG87 317 aa9.66□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Olfr1122Q8VGT9 326 aa9.66□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Rpl4Q9D8E6 419 aaKnown RBP9.66□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Hm13Q9D8V0 378 aa9.66□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Nek6Q9ES70 313 aa9.66□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Abcb10Q9JI39 715 aa9.66□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Abhd1Q9QZC8 412 aa9.66□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Ttll3A4Q9E5 927 aa9.66□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Vmn2r61L7N2B8 865 aa9.66□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Npc1O35604 1277 aa9.66□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Scamp3O35609 349 aa9.66□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Ctla2aP12399 137 aa9.66□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Nsg2P47759 171 aa9.66□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Nat3P50296 290 aa9.66□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Fam171bQ14CH0 825 aa9.66□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Prss36Q5K2P8 849 aa9.66□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Gpr19Q61121 415 aa9.66□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Tfap2cQ61312 449 aa9.66□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Prkg2Q61410 762 aa9.66□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Tead4Q62296 427 aa9.66□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Olfr684Q7TRN8 312 aa9.66□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Fstl5Q8BFR2 847 aa9.66□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Elp6Q8BK75 266 aa9.66□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Sh3rf2Q8BZT2 735 aa9.66□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Mterf3Q8R3J4 412 aa9.66□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Fam96aQ9DCL2 160 aa9.66□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Bace2Q9JL18 514 aa9.66□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Foxe3Q9QY14 288 aa9.66□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Chd5A2A8L1 1946 aa9.66□□□□□ -0.86
Ldlr-201ENSMUST00000034713 FgaE9PV24 789 aa9.66□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Ring1O35730 406 aa9.66□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Stc1O55183 247 aa9.66□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Gstm1P10649 218 aa9.66□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Kcnh6Q32ME0 950 aa9.66□□□□□ -0.86
Ldlr-201ENSMUST00000034713 CblbQ3TTA7 982 aa9.66□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Ddx51Q6P9R1 639 aaKnown RBP9.66□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Mrps7Q80X85 242 aaKnown RBP9.66□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Fam180aQ8BR21 173 aa9.66□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Irak2Q8CFA1 622 aa9.66□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Hmgcll1Q8JZS7 343 aa9.66□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Spin4Q8K1L2 249 aa9.66□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Pdcd10Q8VE70 212 aa9.66□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Riok2Q9CQS5 547 aa9.66□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Psmd8Q9CX56 353 aa9.66□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Epb41l4bQ9JMC8 527 aa9.66□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Olfr2Q9QWU6 327 aa9.66□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Cpxm1Q9Z100 722 aa9.66□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Gys1Q9Z1E4 738 aaKnown RBP9.66□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Gsg1lD3Z7H4 322 aa9.65□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Gm8127E9Q0P0 100 aa9.65□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Gm10719E9Q7T3 227 aa9.65□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Gm21800J3QMJ9 180 aa9.65□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Apex1P28352 317 aaKnown RBP9.65□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Fbxo40P62932 710 aa9.65□□□□□ -0.86
Ldlr-201ENSMUST00000034713 WasP70315 520 aa9.65□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Gpr15Q0VDU3 360 aa9.65□□□□□ -0.86
Retrieved 100 of 22,080 RNA–protein pairs in 28.3 ms