RNA–Protein interactions for RNA: ENSMUST00000028288.4

Notch1-201, Transcript of Neurogenic locus notch homolog protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Notch1, Length 9,488 nt, Biotype protein coding, Subcellular localisation Axon .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Notch1-201ENSMUST00000028288 BpifcQ8C186 509 aa13.16□□□□□ -0.3
Notch1-201ENSMUST00000028288 Zc3h10Q8R205 435 aaKnown RBP13.16□□□□□ -0.3
Notch1-201ENSMUST00000028288 Nudt17Q9CWD3 296 aa13.16□□□□□ -0.3
Notch1-201ENSMUST00000028288 Dusp12Q9D0T2 339 aa13.16□□□□□ -0.3
Notch1-201ENSMUST00000028288 Xlr4bQ9JJQ7 215 aa13.16□□□□□ -0.3
Notch1-201ENSMUST00000028288 Znf207Q9JMD0 495 aaKnown RBP13.16□□□□□ -0.3
Notch1-201ENSMUST00000028288 Cdk5r2O35926 369 aa13.16□□□□□ -0.3
Notch1-201ENSMUST00000028288 Itm2aQ61500 263 aa13.16□□□□□ -0.3
Notch1-201ENSMUST00000028288 Ttyh3Q6P5F7 524 aa13.16□□□□□ -0.3
Notch1-201ENSMUST00000028288 Sec22cQ8BXT9 303 aa13.16□□□□□ -0.3
Notch1-201ENSMUST00000028288 Zbtb26Q8C8S0 451 aa13.16□□□□□ -0.3
Notch1-201ENSMUST00000028288 Tspan1Q99J59 240 aa13.16□□□□□ -0.3
Notch1-201ENSMUST00000028288 Nup205A0A0J9YUD5 2061 aaKnown RBP13.16□□□□□ -0.3
Notch1-201ENSMUST00000028288 Kcnh6Q32ME0 950 aa13.16□□□□□ -0.3
Notch1-201ENSMUST00000028288 Gdpgp1Q3TLS3 386 aa13.16□□□□□ -0.3
Notch1-201ENSMUST00000028288 MyrflQ3UN70 904 aa13.16□□□□□ -0.3
Notch1-201ENSMUST00000028288 Col26a1Q91VF6 440 aa13.16□□□□□ -0.3
Notch1-201ENSMUST00000028288 Mat1aQ91X83 396 aaKnown RBP13.16□□□□□ -0.3
Notch1-201ENSMUST00000028288 Pcdhga11Q91XY8 933 aa13.16□□□□□ -0.3
Notch1-201ENSMUST00000028288 Capns2Q9D7J7 247 aa13.16□□□□□ -0.3
Notch1-201ENSMUST00000028288 Syt16Q7TN83 639 aa13.16□□□□□ -0.3
Notch1-201ENSMUST00000028288 Tspan18Q80WR1 248 aa13.16□□□□□ -0.3
Notch1-201ENSMUST00000028288 Q8C0X8 640 aa13.16□□□□□ -0.3
Notch1-201ENSMUST00000028288 Il17cQ8K4C5 194 aa13.16□□□□□ -0.3
Notch1-201ENSMUST00000028288 Slc5a2Q923I7 670 aa13.16□□□□□ -0.3
Notch1-201ENSMUST00000028288 Gm8356J3QPD3 205 aa13.16□□□□□ -0.3
Notch1-201ENSMUST00000028288 Dpysl2O08553 572 aaKnown RBP13.16□□□□□ -0.3
Notch1-201ENSMUST00000028288 Ccr5P51682 354 aa13.16□□□□□ -0.3
Notch1-201ENSMUST00000028288 Smu1Q3UKJ7 513 aaKnown RBP13.16□□□□□ -0.3
Notch1-201ENSMUST00000028288 Rps27lQ6ZWY3 84 aaKnown RBP13.16□□□□□ -0.3
Notch1-201ENSMUST00000028288 Slc34a3Q80SU6 601 aa13.16□□□□□ -0.3
Notch1-201ENSMUST00000028288 Lurap1lQ8K2P1 221 aa13.16□□□□□ -0.3
Notch1-201ENSMUST00000028288 Dio2Q9Z1Y9 266 aa13.16□□□□□ -0.3
Notch1-201ENSMUST00000028288 Capn1O35350 713 aa13.16□□□□□ -0.3
Notch1-201ENSMUST00000028288 RptnP97347 1118 aa13.16□□□□□ -0.3
Notch1-201ENSMUST00000028288 MedagQ14BA6 303 aa13.16□□□□□ -0.3
Notch1-201ENSMUST00000028288 Slc6a4Q60857 630 aa13.16□□□□□ -0.3
Notch1-201ENSMUST00000028288 Echs1Q8BH95 290 aaKnown RBP13.16□□□□□ -0.3
Notch1-201ENSMUST00000028288 Kdelr3Q8R1L4 214 aa13.16□□□□□ -0.3
Notch1-201ENSMUST00000028288 Rin1Q921Q7 763 aa13.16□□□□□ -0.3
Notch1-201ENSMUST00000028288 Mbd3l1Q9D9H3 186 aa13.16□□□□□ -0.3
Notch1-201ENSMUST00000028288 Rhox6O70238 227 aa13.15□□□□□ -0.3
Notch1-201ENSMUST00000028288 Klf10O89091 479 aa13.15□□□□□ -0.3
Notch1-201ENSMUST00000028288 Fosl2P47930 326 aa13.15□□□□□ -0.3
Notch1-201ENSMUST00000028288 Slc16a3P57787 470 aa13.15□□□□□ -0.3
Notch1-201ENSMUST00000028288 Arpc4P59999 168 aaKnown RBP13.15□□□□□ -0.3
Notch1-201ENSMUST00000028288 Rps3aP97351 264 aaKnown RBP13.15□□□□□ -0.3
Notch1-201ENSMUST00000028288 Mat2aQ3THS6 395 aaKnown RBP13.15□□□□□ -0.3
Notch1-201ENSMUST00000028288 Olfr1308Q7TQX0 320 aa13.15□□□□□ -0.3
Notch1-201ENSMUST00000028288 Tusc3Q8BTV1 347 aa13.15□□□□□ -0.3
Notch1-201ENSMUST00000028288 Olfr1176Q8VG40 315 aa13.15□□□□□ -0.3
Notch1-201ENSMUST00000028288 PyurfQ9D1C3 112 aa13.15□□□□□ -0.3
Notch1-201ENSMUST00000028288 Adgrf4Q9D2L6 698 aa13.15□□□□□ -0.3
Notch1-201ENSMUST00000028288 Mrpl17Q9D8P4 176 aa13.15□□□□□ -0.3
Notch1-201ENSMUST00000028288 Nectin3Q9JLB9 549 aa13.15□□□□□ -0.3
Notch1-201ENSMUST00000028288 Gm6526G3X9Q9 198 aa13.15□□□□□ -0.3
Notch1-201ENSMUST00000028288 Neu1O35657 409 aa13.15□□□□□ -0.3
Notch1-201ENSMUST00000028288 Ggta1P23336 394 aa13.15□□□□□ -0.3
Notch1-201ENSMUST00000028288 Id2P41136 134 aa13.15□□□□□ -0.3
Notch1-201ENSMUST00000028288 Tnfsf9P41274 309 aa13.15□□□□□ -0.3
Notch1-201ENSMUST00000028288 SmsP97355 366 aa13.15□□□□□ -0.3
Notch1-201ENSMUST00000028288 Rcbtb1Q6NXM2 531 aa13.15□□□□□ -0.3
Notch1-201ENSMUST00000028288 PvrQ8K094 408 aa13.15□□□□□ -0.3
Notch1-201ENSMUST00000028288 Trnt1Q8K1J6 434 aa13.15□□□□□ -0.3
Notch1-201ENSMUST00000028288 Il36gQ8R460 164 aa13.15□□□□□ -0.3
Notch1-201ENSMUST00000028288 Plekhh3Q8VCE9 796 aa13.15□□□□□ -0.3
Notch1-201ENSMUST00000028288 Golga7Q91W53 137 aa13.15□□□□□ -0.3
Notch1-201ENSMUST00000028288 Znf639Q99KZ6 485 aa13.15□□□□□ -0.3
Notch1-201ENSMUST00000028288 Q9D979 236 aa13.15□□□□□ -0.3
Notch1-201ENSMUST00000028288 Spatc1lQ9D9W0 342 aa13.15□□□□□ -0.3
Notch1-201ENSMUST00000028288 Nrip2Q9JHR9 270 aa13.15□□□□□ -0.3
Notch1-201ENSMUST00000028288 Slc25a54B1AUS6 473 aa13.15□□□□□ -0.3
Notch1-201ENSMUST00000028288 Gm10338K7N692 204 aa13.15□□□□□ -0.3
Notch1-201ENSMUST00000028288 Zfp37P17141 594 aa13.15□□□□□ -0.3
Notch1-201ENSMUST00000028288 Acsl6Q91WC3 697 aa13.15□□□□□ -0.3
Notch1-201ENSMUST00000028288 Il20rbE9Q9A6 308 aa13.15□□□□□ -0.3
Notch1-201ENSMUST00000028288 Olfr464Q5SW48 313 aa13.15□□□□□ -0.3
Notch1-201ENSMUST00000028288 NrrosQ8BMT4 693 aa13.15□□□□□ -0.3
Notch1-201ENSMUST00000028288 Nmrk2Q9D7C9 195 aa13.15□□□□□ -0.3
Notch1-201ENSMUST00000028288 Izumo1Q9D9J7 397 aa13.15□□□□□ -0.3
Notch1-201ENSMUST00000028288 Q9DAY5 185 aa13.15□□□□□ -0.3
Notch1-201ENSMUST00000028288 Sac3d1A6H687 427 aa13.15□□□□□ -0.3
Notch1-201ENSMUST00000028288 Pdzd7E9Q9W7 1021 aa13.15□□□□□ -0.3
Notch1-201ENSMUST00000028288 Foxd1Q61345 456 aa13.15□□□□□ -0.3
Notch1-201ENSMUST00000028288 EdnraQ61614 427 aa13.15□□□□□ -0.3
Notch1-201ENSMUST00000028288 Nprl3Q8VIJ8 569 aa13.15□□□□□ -0.3
Notch1-201ENSMUST00000028288 B4galt3Q91YY2 395 aa13.15□□□□□ -0.3
Notch1-201ENSMUST00000028288 Lgals2Q9CQW5 130 aa13.15□□□□□ -0.3
Notch1-201ENSMUST00000028288 Gm14459A2BI73 179 aa13.15□□□□□ -0.3
Notch1-201ENSMUST00000028288 H2-T24F8VQG4 363 aa13.15□□□□□ -0.3
Notch1-201ENSMUST00000028288 Cntn5P68500 1098 aa13.15□□□□□ -0.3
Notch1-201ENSMUST00000028288 Ube2q1Q7TSS2 422 aa13.15□□□□□ -0.3
Notch1-201ENSMUST00000028288 Psmf1Q8BHL8 271 aa13.15□□□□□ -0.3
Notch1-201ENSMUST00000028288 Olfr630Q9EQQ7 319 aa13.15□□□□□ -0.3
Notch1-201ENSMUST00000028288 Zfp457L7N1X4 647 aa13.15□□□□□ -0.31
Notch1-201ENSMUST00000028288 AnpepP97449 966 aa13.15□□□□□ -0.31
Notch1-201ENSMUST00000028288 Ppp3r2Q63811 179 aa13.15□□□□□ -0.31
Notch1-201ENSMUST00000028288 TtpalQ9D3D0 343 aa13.15□□□□□ -0.31
Notch1-201ENSMUST00000028288 A0A286YD17 136 aa13.14□□□□□ -0.31
Notch1-201ENSMUST00000028288 Rhox2gL7MUB9 191 aa13.14□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 19.5 ms