RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Mgat4eA6H684 439 aa18.15■□□□□ 0.5
Shkbp1-201ENSMUST00000003857 Cped1B2RX70 1026 aa18.15■□□□□ 0.5
Shkbp1-201ENSMUST00000003857 Gm8237E9Q257 205 aa18.15■□□□□ 0.5
Shkbp1-201ENSMUST00000003857 Gm8879F6R3J9 157 aa18.15■□□□□ 0.5
Shkbp1-201ENSMUST00000003857 Serpinb9cI7HJI5 387 aa18.15■□□□□ 0.5
Shkbp1-201ENSMUST00000003857 Gm6337K7N6X9 211 aa18.15■□□□□ 0.5
Shkbp1-201ENSMUST00000003857 Gm3115L7N285 211 aa18.15■□□□□ 0.5
Shkbp1-201ENSMUST00000003857 HgdO09173 445 aa18.15■□□□□ 0.5
Shkbp1-201ENSMUST00000003857 Ptch2O35595 1182 aa18.15■□□□□ 0.5
Shkbp1-201ENSMUST00000003857 Vti1bO88384 232 aa18.15■□□□□ 0.5
Shkbp1-201ENSMUST00000003857 Fcgr2P08101 330 aa18.15■□□□□ 0.5
Shkbp1-201ENSMUST00000003857 Cdh2P15116 906 aa18.15■□□□□ 0.5
Shkbp1-201ENSMUST00000003857 Htr1bP28334 386 aa18.15■□□□□ 0.5
Shkbp1-201ENSMUST00000003857 Ptpn22P29352 802 aa18.15■□□□□ 0.5
Shkbp1-201ENSMUST00000003857 FpgsP48760 587 aa18.15■□□□□ 0.5
Shkbp1-201ENSMUST00000003857 G6pdxQ00612 515 aa18.15■□□□□ 0.5
Shkbp1-201ENSMUST00000003857 BcheQ03311 603 aa18.15■□□□□ 0.5
Shkbp1-201ENSMUST00000003857 Lrfn1Q2WF71 766 aa18.15■□□□□ 0.5
Shkbp1-201ENSMUST00000003857 CdonQ32MD9 1250 aa18.15■□□□□ 0.5
Shkbp1-201ENSMUST00000003857 Acsm3Q3UNX5 580 aa18.15■□□□□ 0.5
Shkbp1-201ENSMUST00000003857 Tmem247Q497K7 211 aa18.15■□□□□ 0.5
Shkbp1-201ENSMUST00000003857 Aldh16a1Q571I9 802 aa18.15■□□□□ 0.5
Shkbp1-201ENSMUST00000003857 AbrQ5SSL4 859 aa18.15■□□□□ 0.5
Shkbp1-201ENSMUST00000003857 Il20raQ6PHB0 546 aa18.15■□□□□ 0.5
Shkbp1-201ENSMUST00000003857 Ncs1Q8BNY6 190 aa18.15■□□□□ 0.5
Shkbp1-201ENSMUST00000003857 Mtrf1Q8K126 446 aa18.15■□□□□ 0.5
Shkbp1-201ENSMUST00000003857 Prkd3Q8K1Y2 889 aa18.15■□□□□ 0.5
Shkbp1-201ENSMUST00000003857 Adgrg1Q8K209 687 aa18.15■□□□□ 0.5
Shkbp1-201ENSMUST00000003857 TbccQ8VCN9 341 aa18.15■□□□□ 0.5
Shkbp1-201ENSMUST00000003857 Cldn7Q9Z261 211 aa18.15■□□□□ 0.5
Shkbp1-201ENSMUST00000003857 Rhox2bA2A447 191 aa18.14■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Acnat1A2AKK5 416 aa18.14■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Rhox2cA2AWL9 191 aa18.14■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Prrg1A2BFE8 218 aa18.14■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Gm3159K7N760 267 aa18.14■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Gm8897L7N294 181 aa18.14■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Vmn2r92L7N2A4 860 aa18.14■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Mybpc3O70468 1270 aaKnown RBP18.14■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 P01648 108 aa18.14■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Tead2P48301 445 aa18.14■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 BadQ61337 204 aa18.14■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Olfr503Q7TRU8 323 aa18.14■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Zfp438Q8BFX2 798 aa18.14■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Fam20bQ8VCS3 409 aa18.14■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 HadhbQ99JY0 475 aaKnown RBP18.14■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 OoepQ9CWE6 164 aa18.14■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Cpne6Q9Z140 557 aa18.14■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Gm5565A0A0G2JGB2 317 aa18.13■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Gsta2P10648 222 aa18.13■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Gstm1P10649 218 aa18.13■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 VegfcP97953 415 aa18.13■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Eif1adQ3THJ3 170 aaKnown RBP18.13■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Upf3aQ3ULJ3 422 aa18.13■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Clec12aQ504P2 267 aa18.13■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Znf280cQ6P3Y5 742 aa18.13■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Adgrd1Q80T32 903 aa18.13■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Vmn2r81Q80Z09 865 aa18.13■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Timm29Q8BGX2 266 aa18.13■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Rab39aQ8BHD0 217 aa18.13■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Cpne3Q8BT60 533 aa18.13■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Cnot3Q8K0V4 751 aaKnown RBP18.13■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Defb19Q8K3I8 83 aa18.13■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 NrmQ8VC65 262 aa18.13■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Ms4a10Q99N03 267 aa18.13■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Bbs2Q9CWF6 721 aa18.13■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Ppil1Q9D0W5 166 aa18.13■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 GrifinQ9D1U0 144 aa18.13■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Aldh6a1Q9EQ20 535 aaKnown RBP18.13■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Clca3a1Q9QX15 902 aa18.13■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Lama3Q61789 3330 aa18.13■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Olfr1215A3KGY3 312 aa18.13■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 AmbnO55189 407 aa18.13■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Cyp8b1O88962 500 aa18.13■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Kcnj12P52187 427 aa18.13■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 PrtgQ2EY15 1191 aa18.13■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Slc10a7Q5PT53 340 aa18.13■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 DgkbQ6NS52 802 aa18.13■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Reep1Q8BGH4 201 aa18.13■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Q8BGK9 164 aa18.13■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Cpsf4Q8BQZ5 211 aaKnown RBP18.13■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 GabrpQ8QZW7 440 aa18.13■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Ints14Q8R3P6 515 aa18.13■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Wdr74Q8VCG3 384 aa18.13■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Znf24Q91VN1 368 aa18.13■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Paip2bQ91W45 136 aa18.13■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Klk6Q91Y82 253 aa18.13■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 EtfdhQ921G7 616 aa18.13■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Acsl4Q9QUJ7 711 aa18.13■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Dnajb2Q9QYI5 324 aa18.13■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 1110002E22RikE0CYV9 1786 aa18.13■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Fam136b-psA0A140T8T1 138 aa18.12■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Cldn34b1B1AZQ8 209 aa18.12■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 EXOC1LB9EK06 172 aa18.12■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Gm8922F6XVS9 199 aa18.12■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Sh3yl1O08641 340 aa18.12■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Akap3O88987 864 aa18.12■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 IghmP01872 454 aa18.12■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 HbaP01942 142 aa18.12■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Gpr25P0C5I1 358 aa18.12■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Cd19P25918 547 aa18.12■□□□□ 0.49
Retrieved 100 of 22,080 RNA–protein pairs in 24.5 ms