RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 TMEM203Q969S6 136 aa13.99□□□□□ -0.17
SCARB2-216ENST00000639300 PRICKLE1Q96MT3 831 aaPredicted RBP13.99□□□□□ -0.17
SCARB2-216ENST00000639300 FAM120CQ9NX05 1096 aaKnown RBP13.99□□□□□ -0.17
SCARB2-216ENST00000639300 ZNF451Q9Y4E5 1061 aa13.99□□□□□ -0.17
SCARB2-216ENST00000639300 SCN9AQ15858 1988 aa13.99□□□□□ -0.17
SCARB2-216ENST00000639300 BRWD1Q9NSI6 2320 aa13.99□□□□□ -0.17
SCARB2-216ENST00000639300 BTAF1O14981 1849 aa13.99□□□□□ -0.17
SCARB2-216ENST00000639300 EVPLQ92817 2033 aa13.99□□□□□ -0.17
SCARB2-216ENST00000639300 GLOD5A6NK44 160 aa13.99□□□□□ -0.17
SCARB2-216ENST00000639300 RFPL2O75678 378 aa13.99□□□□□ -0.17
SCARB2-216ENST00000639300 SOX14O95416 240 aa13.99□□□□□ -0.17
SCARB2-216ENST00000639300 SLC10A3P09131 477 aa13.99□□□□□ -0.17
SCARB2-216ENST00000639300 ALAS2P22557 587 aa13.99□□□□□ -0.17
SCARB2-216ENST00000639300 IL18R1Q13478 541 aa13.99□□□□□ -0.17
SCARB2-216ENST00000639300 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.99□□□□□ -0.17
SCARB2-216ENST00000639300 TMPRSS11AQ6ZMR5 421 aa13.99□□□□□ -0.17
SCARB2-216ENST00000639300 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.99□□□□□ -0.17
SCARB2-216ENST00000639300 RTL4Q6ZR62 310 aa13.99□□□□□ -0.17
SCARB2-216ENST00000639300 HDDC2Q7Z4H3 204 aa13.99□□□□□ -0.17
SCARB2-216ENST00000639300 LRRTM4Q86VH4 590 aa13.99□□□□□ -0.17
SCARB2-216ENST00000639300 PRSS58Q8IYP2 241 aa13.99□□□□□ -0.17
SCARB2-216ENST00000639300 MARVELD2Q8N4S9 558 aa13.99□□□□□ -0.17
SCARB2-216ENST00000639300 POF1BQ8WVV4 589 aa13.99□□□□□ -0.17
SCARB2-216ENST00000639300 RBM18Q96H35 190 aaKnown RBP13.99□□□□□ -0.17
SCARB2-216ENST00000639300 YTHDF1Q9BYJ9 559 aaKnown RBP13.99□□□□□ -0.17
SCARB2-216ENST00000639300 PCTPQ9UKL6 214 aa13.99□□□□□ -0.17
SCARB2-216ENST00000639300 GNB5O14775 395 aa13.99□□□□□ -0.17
SCARB2-216ENST00000639300 SLC30A4O14863 429 aa13.99□□□□□ -0.17
SCARB2-216ENST00000639300 IDH3BO43837 385 aa13.99□□□□□ -0.17
SCARB2-216ENST00000639300 WBP4O75554 376 aaKnown RBP13.99□□□□□ -0.17
SCARB2-216ENST00000639300 C8BP07358 591 aa13.99□□□□□ -0.17
SCARB2-216ENST00000639300 BPIP17213 487 aa13.99□□□□□ -0.17
SCARB2-216ENST00000639300 PTX3P26022 381 aaPredicted RBP13.99□□□□□ -0.17
SCARB2-216ENST00000639300 CRTC2Q53ET0 693 aaPredicted RBP13.99□□□□□ -0.17
SCARB2-216ENST00000639300 OGFRL1Q5TC84 451 aaPredicted RBP13.99□□□□□ -0.17
SCARB2-216ENST00000639300 CXXC5Q7LFL8 322 aaKnown RBP13.99□□□□□ -0.17
SCARB2-216ENST00000639300 ZNF433Q8N7K0 673 aaPredicted RBP13.99□□□□□ -0.17
SCARB2-216ENST00000639300 SLC29A1Q99808 456 aa13.99□□□□□ -0.17
SCARB2-216ENST00000639300 PCBD2Q9H0N5 130 aa13.99□□□□□ -0.17
SCARB2-216ENST00000639300 FAM47E-STBD1D6RA91 191 aa13.98□□□□□ -0.17
SCARB2-216ENST00000639300 CCNKO75909 580 aa13.98□□□□□ -0.17
SCARB2-216ENST00000639300 PAK4O96013 591 aaPredicted RBP13.98□□□□□ -0.17
SCARB2-216ENST00000639300 ALPPL2P10696 532 aa13.98□□□□□ -0.17
SCARB2-216ENST00000639300 IGFBP6P24592 240 aaPredicted RBP13.98□□□□□ -0.17
SCARB2-216ENST00000639300 CRISP3P54108 245 aa13.98□□□□□ -0.17
SCARB2-216ENST00000639300 SMOXQ9NWM0 555 aa13.98□□□□□ -0.17
SCARB2-216ENST00000639300 H0YC42 278 aa13.98□□□□□ -0.17
SCARB2-216ENST00000639300 SOCS2O14508 198 aa13.98□□□□□ -0.17
SCARB2-216ENST00000639300 SMAD6O43541 496 aaKnown RBP13.98□□□□□ -0.17
SCARB2-216ENST00000639300 NPPAP01160 153 aa13.98□□□□□ -0.17
SCARB2-216ENST00000639300 RPLP0P05388 317 aaKnown RBP13.98□□□□□ -0.17
SCARB2-216ENST00000639300 GABRB3P28472 473 aa13.98□□□□□ -0.17
SCARB2-216ENST00000639300 GDI1P31150 447 aa13.98□□□□□ -0.17
SCARB2-216ENST00000639300 CD70P32970 193 aa13.98□□□□□ -0.17
SCARB2-216ENST00000639300 ZNF155Q12901 538 aaPredicted RBP13.98□□□□□ -0.17
SCARB2-216ENST00000639300 TRIM71Q2Q1W2 868 aaKnown RBP13.98□□□□□ -0.17
SCARB2-216ENST00000639300 NDUFAF6Q330K2 333 aa13.98□□□□□ -0.17
SCARB2-216ENST00000639300 UAP1L1Q3KQV9 507 aa13.98□□□□□ -0.17
SCARB2-216ENST00000639300 CYBRD1Q53TN4 286 aa13.98□□□□□ -0.17
SCARB2-216ENST00000639300 FAM92BQ6ZTR7 304 aa13.98□□□□□ -0.17
SCARB2-216ENST00000639300 IQCHQ86VS3 1027 aa13.98□□□□□ -0.17
SCARB2-216ENST00000639300 CMTR2Q8IYT2 770 aaKnown RBP13.98□□□□□ -0.17
SCARB2-216ENST00000639300 PIGXQ8TBF5 258 aa13.98□□□□□ -0.17
SCARB2-216ENST00000639300 BPIFB1Q8TDL5 484 aa13.98□□□□□ -0.17
SCARB2-216ENST00000639300 SMPDL3AQ92484 453 aa13.98□□□□□ -0.17
SCARB2-216ENST00000639300 ZNF641Q96N77 438 aaPredicted RBP13.98□□□□□ -0.17
SCARB2-216ENST00000639300 MTG2Q9H4K7 406 aa13.98□□□□□ -0.17
SCARB2-216ENST00000639300 CSNK1G1Q9HCP0 422 aa13.98□□□□□ -0.17
SCARB2-216ENST00000639300 MALT1Q9UDY8 824 aa13.98□□□□□ -0.17
SCARB2-216ENST00000639300 PCDHGA7Q9Y5G6 932 aa13.98□□□□□ -0.17
SCARB2-216ENST00000639300 H7BY64 318 aa13.98□□□□□ -0.17
SCARB2-216ENST00000639300 RB1P06400 928 aa13.98□□□□□ -0.17
SCARB2-216ENST00000639300 ALOX5P09917 674 aa13.98□□□□□ -0.17
SCARB2-216ENST00000639300 PABPC4LP0CB38 370 aaKnown RBP13.98□□□□□ -0.17
SCARB2-216ENST00000639300 C8orf89P0DMQ9 161 aa13.98□□□□□ -0.17
SCARB2-216ENST00000639300 ACRV1P26436 265 aa13.98□□□□□ -0.17
SCARB2-216ENST00000639300 RFC2P35250 354 aa13.98□□□□□ -0.17
SCARB2-216ENST00000639300 STXBP1P61764 594 aaKnown RBP13.98□□□□□ -0.17
SCARB2-216ENST00000639300 GTDC1Q4AE62 458 aa13.98□□□□□ -0.17
SCARB2-216ENST00000639300 LETMD1Q6P1Q0 360 aa13.98□□□□□ -0.17
SCARB2-216ENST00000639300 KLHL35Q6PF15 583 aa13.98□□□□□ -0.17
SCARB2-216ENST00000639300 ENPP7Q6UWV6 458 aa13.98□□□□□ -0.17
SCARB2-216ENST00000639300 OXR1Q8N573 874 aa13.98□□□□□ -0.17
SCARB2-216ENST00000639300 C12orf76Q8N812 135 aaPredicted RBP13.98□□□□□ -0.17
SCARB2-216ENST00000639300 OVCA2Q8WZ82 227 aa13.98□□□□□ -0.17
SCARB2-216ENST00000639300 PRAP1Q96NZ9 151 aa13.98□□□□□ -0.17
SCARB2-216ENST00000639300 DPH2Q9BQC3 489 aaPredicted RBP13.98□□□□□ -0.17
SCARB2-216ENST00000639300 SGIP1Q9BQI5 828 aa13.98□□□□□ -0.17
SCARB2-216ENST00000639300 DCSTAMPQ9H295 470 aa13.98□□□□□ -0.17
SCARB2-216ENST00000639300 A0A0J9YVX5 310 aa13.98□□□□□ -0.17
SCARB2-216ENST00000639300 CSNK2A2P19784 350 aaPredicted RBP13.98□□□□□ -0.17
SCARB2-216ENST00000639300 RCVRNP35243 200 aa13.98□□□□□ -0.17
SCARB2-216ENST00000639300 RGRP47804 291 aa13.98□□□□□ -0.17
SCARB2-216ENST00000639300 TUBA4AP68366 448 aa13.98□□□□□ -0.17
SCARB2-216ENST00000639300 GPM6BQ13491 265 aa13.98□□□□□ -0.17
SCARB2-216ENST00000639300 PAGE3Q5JUK9 113 aa13.98□□□□□ -0.17
SCARB2-216ENST00000639300 COLEC12Q5KU26 742 aa13.98□□□□□ -0.17
SCARB2-216ENST00000639300 TMEM25Q86YD3 366 aa13.98□□□□□ -0.17
SCARB2-216ENST00000639300 C3orf30Q96M34 536 aa13.98□□□□□ -0.17
SCARB2-216ENST00000639300 IL17CQ9P0M4 197 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms