RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 TRIM71Q2Q1W2 868 aaKnown RBP10.56□□□□□ -0.72
SNIP1-204ENST00000638725 PTCHD3Q3KNS1 767 aa10.56□□□□□ -0.72
SNIP1-204ENST00000638725 ADGRF1Q5T601 910 aa10.56□□□□□ -0.72
SNIP1-204ENST00000638725 PRSS55Q6UWB4 352 aaPredicted RBP10.56□□□□□ -0.72
SNIP1-204ENST00000638725 CCBE1Q6UXH8 406 aaPredicted RBP10.56□□□□□ -0.72
SNIP1-204ENST00000638725 UBE2R2Q712K3 238 aaPredicted RBP10.56□□□□□ -0.72
SNIP1-204ENST00000638725 NLGN4XQ8N0W4 816 aa10.56□□□□□ -0.72
SNIP1-204ENST00000638725 CELF2-AS1Q8N7Q2 184 aa10.56□□□□□ -0.72
SNIP1-204ENST00000638725 SKA2Q8WVK7 121 aaPredicted RBP10.56□□□□□ -0.72
SNIP1-204ENST00000638725 ELMO1Q92556 727 aa10.56□□□□□ -0.72
SNIP1-204ENST00000638725 MAL2Q969L2 176 aa10.56□□□□□ -0.72
SNIP1-204ENST00000638725 Q96MT0 163 aa10.56□□□□□ -0.72
SNIP1-204ENST00000638725 CHCHD6Q9BRQ6 235 aa10.56□□□□□ -0.72
SNIP1-204ENST00000638725 CENPOQ9BU64 300 aa10.56□□□□□ -0.72
SNIP1-204ENST00000638725 HTATIP2Q9BUP3 242 aa10.56□□□□□ -0.72
SNIP1-204ENST00000638725 NXF2Q9GZY0 626 aaKnown RBP10.56□□□□□ -0.72
SNIP1-204ENST00000638725 ZNF840PA6NDX5 716 aa10.56□□□□□ -0.72
SNIP1-204ENST00000638725 CLCA1A8K7I4 914 aa10.56□□□□□ -0.72
SNIP1-204ENST00000638725 PTHP01270 115 aa10.56□□□□□ -0.72
SNIP1-204ENST00000638725 EIF2S1P05198 315 aaKnown RBP10.56□□□□□ -0.72
SNIP1-204ENST00000638725 ADORA3P0DMS8 318 aa10.56□□□□□ -0.72
SNIP1-204ENST00000638725 TNFRSF1BP20333 461 aa10.56□□□□□ -0.72
SNIP1-204ENST00000638725 S100A1P23297 94 aa10.56□□□□□ -0.72
SNIP1-204ENST00000638725 PRPH2P23942 346 aa10.56□□□□□ -0.72
SNIP1-204ENST00000638725 HNF1BP35680 557 aa10.56□□□□□ -0.72
SNIP1-204ENST00000638725 GGT2P36268 569 aa10.56□□□□□ -0.72
SNIP1-204ENST00000638725 IDH2P48735 452 aaKnown RBP10.56□□□□□ -0.72
SNIP1-204ENST00000638725 GATMP50440 423 aa10.56□□□□□ -0.72
SNIP1-204ENST00000638725 KCNA10Q16322 511 aa10.56□□□□□ -0.72
SNIP1-204ENST00000638725 HECTD3Q5T447 861 aa10.56□□□□□ -0.72
SNIP1-204ENST00000638725 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.56□□□□□ -0.72
SNIP1-204ENST00000638725 MSANTD1Q6ZTZ1 278 aa10.56□□□□□ -0.72
SNIP1-204ENST00000638725 GDPD3Q7L5L3 318 aa10.56□□□□□ -0.72
SNIP1-204ENST00000638725 TSPAN33Q86UF1 283 aa10.56□□□□□ -0.72
SNIP1-204ENST00000638725 NXPE1Q8N323 547 aa10.56□□□□□ -0.72
SNIP1-204ENST00000638725 SYNPOQ8N3V7 929 aa10.56□□□□□ -0.72
SNIP1-204ENST00000638725 WFDC5Q8TCV5 224 aa10.56□□□□□ -0.72
SNIP1-204ENST00000638725 MYDGFQ969H8 173 aa10.56□□□□□ -0.72
SNIP1-204ENST00000638725 ZNF486Q96H40 463 aaPredicted RBP10.56□□□□□ -0.72
SNIP1-204ENST00000638725 FEVQ99581 238 aa10.56□□□□□ -0.72
SNIP1-204ENST00000638725 TTLL2Q9BWV7 592 aa10.56□□□□□ -0.72
SNIP1-204ENST00000638725 TPK1Q9H3S4 243 aa10.56□□□□□ -0.72
SNIP1-204ENST00000638725 CWH43Q9H720 699 aa10.56□□□□□ -0.72
SNIP1-204ENST00000638725 TPT1P8Q9HAU6 139 aa10.56□□□□□ -0.72
SNIP1-204ENST00000638725 KCTD5Q9NXV2 234 aa10.56□□□□□ -0.72
SNIP1-204ENST00000638725 BTBD3Q9Y2F9 522 aa10.56□□□□□ -0.72
SNIP1-204ENST00000638725 FRMPD3Q5JV73 1810 aa10.55□□□□□ -0.72
SNIP1-204ENST00000638725 FAM47E-STBD1D6RA91 191 aa10.55□□□□□ -0.72
SNIP1-204ENST00000638725 GFRA2O00451 464 aa10.55□□□□□ -0.72
SNIP1-204ENST00000638725 HAT1O14929 419 aa10.55□□□□□ -0.72
SNIP1-204ENST00000638725 ADAM12O43184 909 aa10.55□□□□□ -0.72
SNIP1-204ENST00000638725 SMAD6O43541 496 aaKnown RBP10.55□□□□□ -0.72
SNIP1-204ENST00000638725 TBL1XO60907 577 aa10.55□□□□□ -0.72
SNIP1-204ENST00000638725 TRBC1P01850 177 aa10.55□□□□□ -0.72
SNIP1-204ENST00000638725 PRPS1L1P21108 318 aa10.55□□□□□ -0.72
SNIP1-204ENST00000638725 CCR7P32248 378 aa10.55□□□□□ -0.72
SNIP1-204ENST00000638725 CSNK2BP67870 215 aa10.55□□□□□ -0.72
SNIP1-204ENST00000638725 ZNF45Q02386 682 aa10.55□□□□□ -0.72
SNIP1-204ENST00000638725 PRKCDQ05655 676 aa10.55□□□□□ -0.72
SNIP1-204ENST00000638725 BOP1Q14137 746 aaKnown RBP10.55□□□□□ -0.72
SNIP1-204ENST00000638725 GGTA1PQ4G0N0 100 aa10.55□□□□□ -0.72
SNIP1-204ENST00000638725 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.55□□□□□ -0.72
SNIP1-204ENST00000638725 ANKS3Q6ZW76 656 aa10.55□□□□□ -0.72
SNIP1-204ENST00000638725 LRRC70Q7Z2Q7 622 aa10.55□□□□□ -0.72
SNIP1-204ENST00000638725 TSEN54Q7Z6J9 526 aaKnown RBP10.55□□□□□ -0.72
SNIP1-204ENST00000638725 ZSWIM9Q86XI8 627 aa10.55□□□□□ -0.72
SNIP1-204ENST00000638725 PSD4Q8NDX1 1056 aa10.55□□□□□ -0.72
SNIP1-204ENST00000638725 SH3KBP1Q96B97 665 aa10.55□□□□□ -0.72
SNIP1-204ENST00000638725 PLD4Q96BZ4 506 aa10.55□□□□□ -0.72
SNIP1-204ENST00000638725 CDK5RAP1Q96SZ6 601 aaKnown RBP10.55□□□□□ -0.72
SNIP1-204ENST00000638725 EPYCQ99645 322 aa10.55□□□□□ -0.72
SNIP1-204ENST00000638725 RNF38Q9H0F5 515 aa10.55□□□□□ -0.72
SNIP1-204ENST00000638725 TP63Q9H3D4 680 aaPredicted RBP10.55□□□□□ -0.72
SNIP1-204ENST00000638725 RLIMQ9NVW2 624 aa10.55□□□□□ -0.72
SNIP1-204ENST00000638725 MARCH5Q9NX47 278 aa10.55□□□□□ -0.72
SNIP1-204ENST00000638725 TAS2R16Q9NYV7 291 aa10.55□□□□□ -0.72
SNIP1-204ENST00000638725 SPASTQ9UBP0 616 aa10.55□□□□□ -0.72
SNIP1-204ENST00000638725 SLC22A14Q9Y267 594 aa10.55□□□□□ -0.72
SNIP1-204ENST00000638725 PCDHGA3Q9Y5H0 932 aa10.55□□□□□ -0.72
SNIP1-204ENST00000638725 A6NL46 340 aa10.55□□□□□ -0.72
SNIP1-204ENST00000638725 TMEM229AB2RXF0 380 aa10.55□□□□□ -0.72
SNIP1-204ENST00000638725 KMOO15229 486 aa10.55□□□□□ -0.72
SNIP1-204ENST00000638725 ADAMTS4O75173 837 aa10.55□□□□□ -0.72
SNIP1-204ENST00000638725 OPN1SWP03999 348 aa10.55□□□□□ -0.72
SNIP1-204ENST00000638725 HSMCR30P0CW71 290 aa10.55□□□□□ -0.72
SNIP1-204ENST00000638725 LAMP1P11279 417 aa10.55□□□□□ -0.72
SNIP1-204ENST00000638725 AOAHP28039 575 aa10.55□□□□□ -0.72
SNIP1-204ENST00000638725 CTGFP29279 349 aa10.55□□□□□ -0.72
SNIP1-204ENST00000638725 SPAM1P38567 509 aa10.55□□□□□ -0.72
SNIP1-204ENST00000638725 CSKP41240 450 aa10.55□□□□□ -0.72
SNIP1-204ENST00000638725 MBTPS1Q14703 1052 aa10.55□□□□□ -0.72
SNIP1-204ENST00000638725 CDKN3Q16667 212 aa10.55□□□□□ -0.72
SNIP1-204ENST00000638725 ARMCX4Q5H9R4 360 aa10.55□□□□□ -0.72
SNIP1-204ENST00000638725 FRG2Q64ET8 278 aa10.55□□□□□ -0.72
SNIP1-204ENST00000638725 TAS1R1Q7RTX1 841 aa10.55□□□□□ -0.72
SNIP1-204ENST00000638725 STX19Q8N4C7 294 aa10.55□□□□□ -0.72
SNIP1-204ENST00000638725 SLC5A8Q8N695 610 aa10.55□□□□□ -0.72
SNIP1-204ENST00000638725 L3MBTL4Q8NA19 623 aa10.55□□□□□ -0.72
SNIP1-204ENST00000638725 GPR26Q8NDV2 337 aa10.55□□□□□ -0.72
SNIP1-204ENST00000638725 KBTBD8Q8NFY9 601 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms