RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 HGDQ93099 445 aa11.65□□□□□ -0.54
CAPN3-221ENST00000638141 CREB3L1Q96BA8 519 aa11.65□□□□□ -0.54
CAPN3-221ENST00000638141 SENP8Q96LD8 212 aa11.65□□□□□ -0.54
CAPN3-221ENST00000638141 FOPNLQ96NB1 174 aa11.65□□□□□ -0.54
CAPN3-221ENST00000638141 SLC2A13Q96QE2 648 aa11.65□□□□□ -0.54
CAPN3-221ENST00000638141 P2RY13Q9BPV8 354 aa11.65□□□□□ -0.54
CAPN3-221ENST00000638141 CLEC4MQ9H2X3 399 aaPredicted RBP11.65□□□□□ -0.54
CAPN3-221ENST00000638141 VAPAQ9P0L0 249 aa11.65□□□□□ -0.54
CAPN3-221ENST00000638141 FNIP2Q9P278 1114 aa11.65□□□□□ -0.54
CAPN3-221ENST00000638141 LIPT1Q9Y234 373 aa11.65□□□□□ -0.54
CAPN3-221ENST00000638141 KCNMB2Q9Y691 235 aa11.65□□□□□ -0.54
CAPN3-221ENST00000638141 ANKRD36A6QL64 1941 aa11.65□□□□□ -0.54
CAPN3-221ENST00000638141 ZNF670-ZNF695F2Z2N8 137 aa11.65□□□□□ -0.54
CAPN3-221ENST00000638141 SLC30A4O14863 429 aa11.65□□□□□ -0.54
CAPN3-221ENST00000638141 PCDH17O14917 1159 aa11.65□□□□□ -0.54
CAPN3-221ENST00000638141 KPNA5O15131 536 aa11.65□□□□□ -0.54
CAPN3-221ENST00000638141 GMDSO60547 372 aa11.65□□□□□ -0.54
CAPN3-221ENST00000638141 CLEC2LP0C7M8 214 aa11.65□□□□□ -0.54
CAPN3-221ENST00000638141 HLA-EP13747 358 aa11.65□□□□□ -0.54
CAPN3-221ENST00000638141 MTHFD2P13995 350 aa11.65□□□□□ -0.54
CAPN3-221ENST00000638141 FDXRP22570 491 aa11.65□□□□□ -0.54
CAPN3-221ENST00000638141 ADRA1BP35368 520 aa11.65□□□□□ -0.54
CAPN3-221ENST00000638141 NUP62P37198 522 aaPredicted RBP11.65□□□□□ -0.54
CAPN3-221ENST00000638141 HSF2Q03933 536 aa11.65□□□□□ -0.54
CAPN3-221ENST00000638141 CAMK2GQ13555 558 aaPredicted RBP11.65□□□□□ -0.54
CAPN3-221ENST00000638141 KIAA0040Q15053 153 aa11.65□□□□□ -0.54
CAPN3-221ENST00000638141 PAN2Q504Q3 1202 aaKnown RBP11.65□□□□□ -0.54
CAPN3-221ENST00000638141 ACOT1Q86TX2 421 aa11.65□□□□□ -0.54
CAPN3-221ENST00000638141 CDH26Q8IXH8 852 aa11.65□□□□□ -0.54
CAPN3-221ENST00000638141 CLDN22Q8N7P3 220 aa11.65□□□□□ -0.54
CAPN3-221ENST00000638141 DENND6BQ8NEG7 585 aa11.65□□□□□ -0.54
CAPN3-221ENST00000638141 OR10A6Q8NH74 314 aa11.65□□□□□ -0.54
CAPN3-221ENST00000638141 ZBED3Q96IU2 234 aaPredicted RBP11.65□□□□□ -0.54
CAPN3-221ENST00000638141 MGLLQ99685 303 aa11.65□□□□□ -0.54
CAPN3-221ENST00000638141 BARD1Q99728 777 aaKnown RBP11.65□□□□□ -0.54
CAPN3-221ENST00000638141 DPYSL5Q9BPU6 564 aa11.65□□□□□ -0.54
CAPN3-221ENST00000638141 GSX2Q9BZM3 304 aa11.65□□□□□ -0.54
CAPN3-221ENST00000638141 ZFP64Q9NPA5 681 aa11.65□□□□□ -0.54
CAPN3-221ENST00000638141 TMLHEQ9NVH6 421 aa11.65□□□□□ -0.54
CAPN3-221ENST00000638141 PRMT7Q9NVM4 692 aaPredicted RBP11.65□□□□□ -0.54
CAPN3-221ENST00000638141 KIF17Q9P2E2 1029 aa11.65□□□□□ -0.54
CAPN3-221ENST00000638141 SAMD4AQ9UPU9 718 aaKnown RBP11.65□□□□□ -0.54
CAPN3-221ENST00000638141 ZNF236Q9UL36 1845 aa11.65□□□□□ -0.54
CAPN3-221ENST00000638141 FABP12A6NFH5 140 aa11.64□□□□□ -0.55
CAPN3-221ENST00000638141 SMLR1H3BR10 107 aa11.64□□□□□ -0.55
CAPN3-221ENST00000638141 QSOX1O00391 747 aa11.64□□□□□ -0.55
CAPN3-221ENST00000638141 FABP7O15540 132 aa11.64□□□□□ -0.55
CAPN3-221ENST00000638141 TSC22D2O75157 780 aa11.64□□□□□ -0.55
CAPN3-221ENST00000638141 PGRP06401 933 aa11.64□□□□□ -0.55
CAPN3-221ENST00000638141 EPHA2P29317 976 aa11.64□□□□□ -0.55
CAPN3-221ENST00000638141 ABATP80404 500 aa11.64□□□□□ -0.55
CAPN3-221ENST00000638141 ZNF169Q14929 603 aaPredicted RBP11.64□□□□□ -0.55
CAPN3-221ENST00000638141 ZMYND11Q15326 602 aa11.64□□□□□ -0.55
CAPN3-221ENST00000638141 DUSP6Q16828 381 aa11.64□□□□□ -0.55
CAPN3-221ENST00000638141 WSCD2Q2TBF2 565 aa11.64□□□□□ -0.55
CAPN3-221ENST00000638141 PTCHD3Q3KNS1 767 aa11.64□□□□□ -0.55
CAPN3-221ENST00000638141 HSD17B12Q53GQ0 312 aa11.64□□□□□ -0.55
CAPN3-221ENST00000638141 ANKS6Q68DC2 871 aa11.64□□□□□ -0.55
CAPN3-221ENST00000638141 BICRALQ6AI39 1079 aa11.64□□□□□ -0.55
CAPN3-221ENST00000638141 METAP1DQ6UB28 335 aaPredicted RBP11.64□□□□□ -0.55
CAPN3-221ENST00000638141 TMEM107Q6UX40 140 aa11.64□□□□□ -0.55
CAPN3-221ENST00000638141 ZNF704Q6ZNC4 412 aaPredicted RBP11.64□□□□□ -0.55
CAPN3-221ENST00000638141 CAMKK1Q8N5S9 505 aa11.64□□□□□ -0.55
CAPN3-221ENST00000638141 YIPF5Q969M3 257 aa11.64□□□□□ -0.55
CAPN3-221ENST00000638141 INTS12Q96CB8 462 aaKnown RBP11.64□□□□□ -0.55
CAPN3-221ENST00000638141 KATNAL1Q9BW62 490 aa11.64□□□□□ -0.55
CAPN3-221ENST00000638141 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.64□□□□□ -0.55
CAPN3-221ENST00000638141 MIXL1Q9H2W2 232 aa11.64□□□□□ -0.55
CAPN3-221ENST00000638141 CNOT2Q9NZN8 540 aaKnown RBP11.64□□□□□ -0.55
CAPN3-221ENST00000638141 SEC14L4Q9UDX3 406 aa11.64□□□□□ -0.55
CAPN3-221ENST00000638141 ZNF112Q9UJU3 913 aa11.64□□□□□ -0.55
CAPN3-221ENST00000638141 DERAQ9Y315 318 aa11.64□□□□□ -0.55
CAPN3-221ENST00000638141 SESN1Q9Y6P5 492 aa11.64□□□□□ -0.55
CAPN3-221ENST00000638141 GABRDO14764 452 aa11.64□□□□□ -0.55
CAPN3-221ENST00000638141 SERPINA1P01009 418 aa11.64□□□□□ -0.55
CAPN3-221ENST00000638141 JCHAINP01591 159 aa11.64□□□□□ -0.55
CAPN3-221ENST00000638141 C9P02748 559 aa11.64□□□□□ -0.55
CAPN3-221ENST00000638141 SEMG1P04279 462 aa11.64□□□□□ -0.55
CAPN3-221ENST00000638141 TP53P04637 393 aaPredicted RBP11.64□□□□□ -0.55
CAPN3-221ENST00000638141 LCP1P13796 627 aa11.64□□□□□ -0.55
CAPN3-221ENST00000638141 OSTNP61366 133 aa11.64□□□□□ -0.55
CAPN3-221ENST00000638141 PURAQ00577 322 aaKnown RBP11.64□□□□□ -0.55
CAPN3-221ENST00000638141 CSTF3Q12996 717 aaKnown RBP11.64□□□□□ -0.55
CAPN3-221ENST00000638141 ELOAQ14241 798 aaKnown RBP11.64□□□□□ -0.55
CAPN3-221ENST00000638141 TSC22D1Q15714 1073 aa11.64□□□□□ -0.55
CAPN3-221ENST00000638141 SSX1Q16384 188 aa11.64□□□□□ -0.55
CAPN3-221ENST00000638141 RUNDC3AQ59EK9 446 aa11.64□□□□□ -0.55
CAPN3-221ENST00000638141 DCAF15Q66K64 600 aa11.64□□□□□ -0.55
CAPN3-221ENST00000638141 TMEM207Q6UWW9 146 aa11.64□□□□□ -0.55
CAPN3-221ENST00000638141 USP50Q70EL3 339 aaPredicted RBP11.64□□□□□ -0.55
CAPN3-221ENST00000638141 TRIM69Q86WT6 500 aa11.64□□□□□ -0.55
CAPN3-221ENST00000638141 ZZZ3Q8IYH5 903 aa11.64□□□□□ -0.55
CAPN3-221ENST00000638141 PGBD5Q8N414 524 aa11.64□□□□□ -0.55
CAPN3-221ENST00000638141 MTMR14Q8NCE2 650 aa11.64□□□□□ -0.55
CAPN3-221ENST00000638141 OR6M1Q8NGM8 313 aa11.64□□□□□ -0.55
CAPN3-221ENST00000638141 UBE2FQ969M7 185 aa11.64□□□□□ -0.55
CAPN3-221ENST00000638141 UPRTQ96BW1 309 aa11.64□□□□□ -0.55
CAPN3-221ENST00000638141 EXOC2Q96KP1 924 aa11.64□□□□□ -0.55
CAPN3-221ENST00000638141 ATOH8Q96SQ7 321 aa11.64□□□□□ -0.55
CAPN3-221ENST00000638141 RTP3Q9BQQ7 232 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms