RNA–Protein interactions for RNA: ENST00000634889.1

CDC42BPB-209, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-209ENST00000634889 PCDHGA6Q9Y5G7 932 aa14.1□□□□□ -0.15
CDC42BPB-209ENST00000634889 LAMA5O15230 3695 aa14.1□□□□□ -0.15
CDC42BPB-209ENST00000634889 A0A1B0GX78 115 aa14.09□□□□□ -0.15
CDC42BPB-209ENST00000634889 TRBC2A0A5B9 178 aa14.09□□□□□ -0.15
CDC42BPB-209ENST00000634889 UBXN8O00124 270 aa14.09□□□□□ -0.15
CDC42BPB-209ENST00000634889 EFSO43281 561 aa14.09□□□□□ -0.15
CDC42BPB-209ENST00000634889 KLK8O60259 260 aa14.09□□□□□ -0.15
CDC42BPB-209ENST00000634889 CDH16O75309 829 aa14.09□□□□□ -0.15
CDC42BPB-209ENST00000634889 STK16O75716 305 aa14.09□□□□□ -0.15
CDC42BPB-209ENST00000634889 MTHFD2P13995 350 aa14.09□□□□□ -0.15
CDC42BPB-209ENST00000634889 TCN2P20062 427 aa14.09□□□□□ -0.15
CDC42BPB-209ENST00000634889 GDF5P43026 501 aa14.09□□□□□ -0.15
CDC42BPB-209ENST00000634889 ALDH18A1P54886 795 aaKnown RBP14.09□□□□□ -0.15
CDC42BPB-209ENST00000634889 CDC16Q13042 620 aa14.09□□□□□ -0.15
CDC42BPB-209ENST00000634889 SRSF6Q13247 344 aaKnown RBP14.09□□□□□ -0.15
CDC42BPB-209ENST00000634889 C18orf21Q32NC0 220 aaPredicted RBP14.09□□□□□ -0.15
CDC42BPB-209ENST00000634889 LRRC70Q7Z2Q7 622 aa14.09□□□□□ -0.15
CDC42BPB-209ENST00000634889 PLD6Q8N2A8 252 aaKnown RBP14.09□□□□□ -0.15
CDC42BPB-209ENST00000634889 MREGQ8N565 214 aa14.09□□□□□ -0.15
CDC42BPB-209ENST00000634889 CSNK1A1LQ8N752 337 aa14.09□□□□□ -0.15
CDC42BPB-209ENST00000634889 MZB1Q8WU39 189 aa14.09□□□□□ -0.15
CDC42BPB-209ENST00000634889 CT55Q8WUE5 264 aa14.09□□□□□ -0.15
CDC42BPB-209ENST00000634889 GBP5Q96PP8 586 aa14.09□□□□□ -0.15
CDC42BPB-209ENST00000634889 NLNQ9BYT8 704 aa14.09□□□□□ -0.15
CDC42BPB-209ENST00000634889 CD244Q9BZW8 370 aa14.09□□□□□ -0.15
CDC42BPB-209ENST00000634889 PRORYQ9H606 182 aa14.09□□□□□ -0.15
CDC42BPB-209ENST00000634889 CPNE5Q9HCH3 593 aa14.09□□□□□ -0.15
CDC42BPB-209ENST00000634889 CUTCQ9NTM9 273 aa14.09□□□□□ -0.15
CDC42BPB-209ENST00000634889 DNAJC11Q9NVH1 559 aa14.09□□□□□ -0.15
CDC42BPB-209ENST00000634889 DHCR7Q9UBM7 475 aaKnown RBP14.09□□□□□ -0.15
CDC42BPB-209ENST00000634889 TBK1Q9UHD2 729 aa14.09□□□□□ -0.15
CDC42BPB-209ENST00000634889 TMCO1Q9UM00 188 aa14.09□□□□□ -0.15
CDC42BPB-209ENST00000634889 PCDHGA4Q9Y5G9 962 aa14.09□□□□□ -0.15
CDC42BPB-209ENST00000634889 ITPR1Q14643 2758 aa14.09□□□□□ -0.15
CDC42BPB-209ENST00000634889 MDC1Q14676 2089 aaKnown RBP14.08□□□□□ -0.15
CDC42BPB-209ENST00000634889 HYKKA2RU49 373 aa14.08□□□□□ -0.16
CDC42BPB-209ENST00000634889 MAP2K7O14733 419 aa14.08□□□□□ -0.16
CDC42BPB-209ENST00000634889 DSCR3O14972 297 aa14.08□□□□□ -0.16
CDC42BPB-209ENST00000634889 EIF2S1P05198 315 aaKnown RBP14.08□□□□□ -0.16
CDC42BPB-209ENST00000634889 RAB40ALP0C0E4 278 aa14.08□□□□□ -0.16
CDC42BPB-209ENST00000634889 HSPA7P48741 367 aa14.08□□□□□ -0.16
CDC42BPB-209ENST00000634889 CXADRP78310 365 aa14.08□□□□□ -0.16
CDC42BPB-209ENST00000634889 DCDP81605 110 aaKnown RBP14.08□□□□□ -0.16
CDC42BPB-209ENST00000634889 DNASE1L3Q13609 305 aa14.08□□□□□ -0.16
CDC42BPB-209ENST00000634889 SETDB1Q15047 1291 aa14.08□□□□□ -0.16
CDC42BPB-209ENST00000634889 PDK4Q16654 411 aa14.08□□□□□ -0.16
CDC42BPB-209ENST00000634889 MUM1Q2TAK8 710 aa14.08□□□□□ -0.16
CDC42BPB-209ENST00000634889 COL28A1Q2UY09 1125 aa14.08□□□□□ -0.16
CDC42BPB-209ENST00000634889 CRTC2Q53ET0 693 aaPredicted RBP14.08□□□□□ -0.16
CDC42BPB-209ENST00000634889 CATSPEREQ5SY80 951 aa14.08□□□□□ -0.16
CDC42BPB-209ENST00000634889 GARNL3Q5VVW2 1013 aa14.08□□□□□ -0.16
CDC42BPB-209ENST00000634889 METTL2BQ6P1Q9 378 aaKnown RBP14.08□□□□□ -0.16
CDC42BPB-209ENST00000634889 FAM199XQ6PEV8 388 aaPredicted RBP14.08□□□□□ -0.16
CDC42BPB-209ENST00000634889 C19orf48Q6RUI8 117 aa14.08□□□□□ -0.16
CDC42BPB-209ENST00000634889 NXPE4Q6UWF7 544 aa14.08□□□□□ -0.16
CDC42BPB-209ENST00000634889 TTLL10Q6ZVT0 673 aa14.08□□□□□ -0.16
CDC42BPB-209ENST00000634889 TMPRSS11BQ86T26 416 aa14.08□□□□□ -0.16
CDC42BPB-209ENST00000634889 RIBC1Q8N443 379 aaPredicted RBP14.08□□□□□ -0.16
CDC42BPB-209ENST00000634889 MRPL57Q9BQC6 102 aaKnown RBP14.08□□□□□ -0.16
CDC42BPB-209ENST00000634889 AIF1LQ9BQI0 150 aa14.08□□□□□ -0.16
CDC42BPB-209ENST00000634889 CHST8Q9H2A9 424 aa14.08□□□□□ -0.16
CDC42BPB-209ENST00000634889 MRPL46Q9H2W6 279 aaKnown RBP14.08□□□□□ -0.16
CDC42BPB-209ENST00000634889 EHD1Q9H4M9 534 aa14.08□□□□□ -0.16
CDC42BPB-209ENST00000634889 SYNPO2LQ9H987 977 aa14.08□□□□□ -0.16
CDC42BPB-209ENST00000634889 AKIRIN1Q9H9L7 192 aaPredicted RBP14.08□□□□□ -0.16
CDC42BPB-209ENST00000634889 STARD5Q9NSY2 213 aa14.08□□□□□ -0.16
CDC42BPB-209ENST00000634889 PKD1L2Q7Z442 2459 aa14.08□□□□□ -0.16
CDC42BPB-209ENST00000634889 FEZF1A0PJY2 475 aa14.07□□□□□ -0.16
CDC42BPB-209ENST00000634889 ZNF891A8MT65 544 aaPredicted RBP14.07□□□□□ -0.16
CDC42BPB-209ENST00000634889 C9J4A7 227 aa14.07□□□□□ -0.16
CDC42BPB-209ENST00000634889 CLGNO14967 610 aa14.07□□□□□ -0.16
CDC42BPB-209ENST00000634889 CCNT2O60583 730 aaKnown RBP14.07□□□□□ -0.16
CDC42BPB-209ENST00000634889 ONECUT2O95948 504 aa14.07□□□□□ -0.16
CDC42BPB-209ENST00000634889 RECKO95980 971 aa14.07□□□□□ -0.16
CDC42BPB-209ENST00000634889 GSTA1P08263 222 aa14.07□□□□□ -0.16
CDC42BPB-209ENST00000634889 CD63P08962 238 aa14.07□□□□□ -0.16
CDC42BPB-209ENST00000634889 PIM1P11309 404 aaPredicted RBP14.07□□□□□ -0.16
CDC42BPB-209ENST00000634889 GFAPP14136 432 aa14.07□□□□□ -0.16
CDC42BPB-209ENST00000634889 WT1P19544 449 aaPredicted RBP14.07□□□□□ -0.16
CDC42BPB-209ENST00000634889 CXCR2P25025 360 aa14.07□□□□□ -0.16
CDC42BPB-209ENST00000634889 PTPN4P29074 926 aa14.07□□□□□ -0.16
CDC42BPB-209ENST00000634889 AHRP35869 848 aa14.07□□□□□ -0.16
CDC42BPB-209ENST00000634889 BCL6P41182 706 aa14.07□□□□□ -0.16
CDC42BPB-209ENST00000634889 SLCO1A2P46721 670 aa14.07□□□□□ -0.16
CDC42BPB-209ENST00000634889 RPS15P62841 145 aaKnown RBP14.07□□□□□ -0.16
CDC42BPB-209ENST00000634889 REEP5Q00765 189 aa14.07□□□□□ -0.16
CDC42BPB-209ENST00000634889 MC1RQ01726 317 aa14.07□□□□□ -0.16
CDC42BPB-209ENST00000634889 NAA30Q147X3 362 aaPredicted RBP14.07□□□□□ -0.16
CDC42BPB-209ENST00000634889 NKAIN1Q4KMZ8 207 aa14.07□□□□□ -0.16
CDC42BPB-209ENST00000634889 ATG9BQ674R7 924 aa14.07□□□□□ -0.16
CDC42BPB-209ENST00000634889 PRMT9Q6P2P2 845 aa14.07□□□□□ -0.16
CDC42BPB-209ENST00000634889 FAM198BQ6UWH4 519 aa14.07□□□□□ -0.16
CDC42BPB-209ENST00000634889 SLCO4C1Q6ZQN7 724 aa14.07□□□□□ -0.16
CDC42BPB-209ENST00000634889 GPR155Q7Z3F1 870 aa14.07□□□□□ -0.16
CDC42BPB-209ENST00000634889 PLD3Q8IV08 490 aa14.07□□□□□ -0.16
CDC42BPB-209ENST00000634889 ARHGEF39Q8N4T4 335 aa14.07□□□□□ -0.16
CDC42BPB-209ENST00000634889 MFSD9Q8NBP5 474 aa14.07□□□□□ -0.16
CDC42BPB-209ENST00000634889 EPS8L3Q8TE67 593 aaKnown RBP14.07□□□□□ -0.16
CDC42BPB-209ENST00000634889 STARD8Q92502 1023 aa14.07□□□□□ -0.16
CDC42BPB-209ENST00000634889 TM4SF19Q96DZ7 209 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms