RNA–Protein interactions for RNA: ENST00000624009.3

LINC00963-217, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 663 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-217ENST00000624009 TRIM55Q9BYV6 548 aa11.86□□□□□ -0.51
LINC00963-217ENST00000624009 TGIF2Q9GZN2 237 aa11.86□□□□□ -0.51
LINC00963-217ENST00000624009 DERL2Q9GZP9 239 aa11.86□□□□□ -0.51
LINC00963-217ENST00000624009 C14orf105Q9NVL8 296 aa11.86□□□□□ -0.51
LINC00963-217ENST00000624009 C5AR2Q9P296 337 aa11.86□□□□□ -0.51
LINC00963-217ENST00000624009 ZNF282Q9UDV7 671 aaPredicted RBP11.86□□□□□ -0.51
LINC00963-217ENST00000624009 TP53TG5Q9Y2B4 290 aa11.86□□□□□ -0.51
LINC00963-217ENST00000624009 SPENQ96T58 3664 aaKnown RBP11.86□□□□□ -0.51
LINC00963-217ENST00000624009 A0A1W2PQ72 361 aa11.85□□□□□ -0.51
LINC00963-217ENST00000624009 ARGFXA6NJG6 315 aa11.85□□□□□ -0.51
LINC00963-217ENST00000624009 H0YIG0 161 aa11.85□□□□□ -0.51
LINC00963-217ENST00000624009 H7BY64 318 aa11.85□□□□□ -0.51
LINC00963-217ENST00000624009 AGPSO00116 658 aa11.85□□□□□ -0.51
LINC00963-217ENST00000624009 HAT1O14929 419 aa11.85□□□□□ -0.51
LINC00963-217ENST00000624009 SLC28A2O43868 658 aa11.85□□□□□ -0.51
LINC00963-217ENST00000624009 NRP2O60462 931 aa11.85□□□□□ -0.51
LINC00963-217ENST00000624009 NPPBP16860 134 aa11.85□□□□□ -0.51
LINC00963-217ENST00000624009 SPRP35270 261 aaPredicted RBP11.85□□□□□ -0.51
LINC00963-217ENST00000624009 SLC26A3P40879 764 aa11.85□□□□□ -0.51
LINC00963-217ENST00000624009 MAGEA4P43358 317 aa11.85□□□□□ -0.51
LINC00963-217ENST00000624009 PGDP52209 483 aa11.85□□□□□ -0.51
LINC00963-217ENST00000624009 SLC12A2P55011 1212 aa11.85□□□□□ -0.51
LINC00963-217ENST00000624009 TAS2R39P59534 338 aa11.85□□□□□ -0.51
LINC00963-217ENST00000624009 GPX6P59796 221 aa11.85□□□□□ -0.51
LINC00963-217ENST00000624009 CSNK1G2P78368 415 aa11.85□□□□□ -0.51
LINC00963-217ENST00000624009 OCA2Q04671 838 aa11.85□□□□□ -0.51
LINC00963-217ENST00000624009 NAE1Q13564 534 aa11.85□□□□□ -0.51
LINC00963-217ENST00000624009 ATP1A4Q13733 1029 aa11.85□□□□□ -0.51
LINC00963-217ENST00000624009 SLC9A5Q14940 896 aa11.85□□□□□ -0.51
LINC00963-217ENST00000624009 ZKSCAN8Q15776 578 aaPredicted RBP11.85□□□□□ -0.51
LINC00963-217ENST00000624009 GRTP1Q5TC63 336 aa11.85□□□□□ -0.51
LINC00963-217ENST00000624009 TMEM207Q6UWW9 146 aa11.85□□□□□ -0.51
LINC00963-217ENST00000624009 ASB18Q6ZVZ8 466 aa11.85□□□□□ -0.51
LINC00963-217ENST00000624009 KLHDC8AQ8IYD2 350 aa11.85□□□□□ -0.51
LINC00963-217ENST00000624009 TBC1D19Q8N5T2 526 aa11.85□□□□□ -0.51
LINC00963-217ENST00000624009 CLEC1AQ8NC01 280 aa11.85□□□□□ -0.51
LINC00963-217ENST00000624009 TM4SF19Q96DZ7 209 aa11.85□□□□□ -0.51
LINC00963-217ENST00000624009 CABS1Q96KC9 395 aa11.85□□□□□ -0.51
LINC00963-217ENST00000624009 PRAP1Q96NZ9 151 aa11.85□□□□□ -0.51
LINC00963-217ENST00000624009 SMAD5Q99717 465 aaKnown RBP11.85□□□□□ -0.51
LINC00963-217ENST00000624009 DRC3Q9H069 523 aa11.85□□□□□ -0.51
LINC00963-217ENST00000624009 LRRC4CQ9HCJ2 640 aa11.85□□□□□ -0.51
LINC00963-217ENST00000624009 GPAMQ9HCL2 828 aa11.85□□□□□ -0.51
LINC00963-217ENST00000624009 MKKSQ9NPJ1 570 aaPredicted RBP11.85□□□□□ -0.51
LINC00963-217ENST00000624009 SMYD2Q9NRG4 433 aa11.85□□□□□ -0.51
LINC00963-217ENST00000624009 ZDHHC18Q9NUE0 388 aa11.85□□□□□ -0.51
LINC00963-217ENST00000624009 CUEDC1Q9NWM3 386 aaPredicted RBP11.85□□□□□ -0.51
LINC00963-217ENST00000624009 P4HTMQ9NXG6 502 aa11.85□□□□□ -0.51
LINC00963-217ENST00000624009 RUVBL1Q9Y265 456 aaKnown RBP11.85□□□□□ -0.51
LINC00963-217ENST00000624009 ZNF451Q9Y4E5 1061 aa11.85□□□□□ -0.51
LINC00963-217ENST00000624009 MAP4K5Q9Y4K4 846 aa11.85□□□□□ -0.51
LINC00963-217ENST00000624009 OARD1Q9Y530 152 aa11.85□□□□□ -0.51
LINC00963-217ENST00000624009 RELNP78509 3460 aa11.85□□□□□ -0.51
LINC00963-217ENST00000624009 HECTD1Q9ULT8 2610 aa11.85□□□□□ -0.51
LINC00963-217ENST00000624009 COL12A1Q99715 3063 aa11.85□□□□□ -0.51
LINC00963-217ENST00000624009 PCSK5Q92824 1860 aa11.85□□□□□ -0.51
LINC00963-217ENST00000624009 DNAJB5O75953 348 aa11.84□□□□□ -0.51
LINC00963-217ENST00000624009 URI1O94763 535 aaPredicted RBP11.84□□□□□ -0.51
LINC00963-217ENST00000624009 IPO13O94829 963 aaKnown RBP11.84□□□□□ -0.51
LINC00963-217ENST00000624009 NSA2O95478 260 aaKnown RBP11.84□□□□□ -0.51
LINC00963-217ENST00000624009 EIF2S1P05198 315 aaKnown RBP11.84□□□□□ -0.51
LINC00963-217ENST00000624009 ANXA5P08758 320 aa11.84□□□□□ -0.51
LINC00963-217ENST00000624009 OTX2P32243 289 aa11.84□□□□□ -0.51
LINC00963-217ENST00000624009 CCR8P51685 355 aa11.84□□□□□ -0.51
LINC00963-217ENST00000624009 ATP6V0D1P61421 351 aa11.84□□□□□ -0.51
LINC00963-217ENST00000624009 MRPS25P82663 173 aaKnown RBP11.84□□□□□ -0.51
LINC00963-217ENST00000624009 AIMP2Q13155 320 aaKnown RBP11.84□□□□□ -0.51
LINC00963-217ENST00000624009 ZXDCQ2QGD7 858 aaPredicted RBP11.84□□□□□ -0.51
LINC00963-217ENST00000624009 VWA5B1Q5TIE3 1220 aa11.84□□□□□ -0.51
LINC00963-217ENST00000624009 CPZQ66K79 652 aa11.84□□□□□ -0.51
LINC00963-217ENST00000624009 MBOAT1Q6ZNC8 495 aa11.84□□□□□ -0.51
LINC00963-217ENST00000624009 VN1R4Q7Z5H5 301 aa11.84□□□□□ -0.51
LINC00963-217ENST00000624009 PPP1R32Q7Z5V6 425 aa11.84□□□□□ -0.51
LINC00963-217ENST00000624009 ADCK2Q7Z695 626 aa11.84□□□□□ -0.51
LINC00963-217ENST00000624009 TCAIMQ8N3R3 496 aa11.84□□□□□ -0.51
LINC00963-217ENST00000624009 CAMKVQ8NCB2 501 aa11.84□□□□□ -0.51
LINC00963-217ENST00000624009 COL26A1Q96A83 441 aa11.84□□□□□ -0.51
LINC00963-217ENST00000624009 SEC16BQ96JE7 1060 aa11.84□□□□□ -0.51
LINC00963-217ENST00000624009 UBXN10Q96LJ8 280 aa11.84□□□□□ -0.51
LINC00963-217ENST00000624009 FUT8Q9BYC5 575 aa11.84□□□□□ -0.51
LINC00963-217ENST00000624009 PITHD1Q9GZP4 211 aaPredicted RBP11.84□□□□□ -0.51
LINC00963-217ENST00000624009 ATG10Q9H0Y0 220 aa11.84□□□□□ -0.51
LINC00963-217ENST00000624009 ZNF71Q9NQZ8 489 aaPredicted RBP11.84□□□□□ -0.51
LINC00963-217ENST00000624009 GPR83Q9NYM4 423 aa11.84□□□□□ -0.51
LINC00963-217ENST00000624009 CTNNAL1Q9UBT7 734 aa11.84□□□□□ -0.51
LINC00963-217ENST00000624009 SLC22A7Q9Y694 548 aa11.84□□□□□ -0.51
LINC00963-217ENST00000624009 ZGRF1Q86YA3 2104 aa11.84□□□□□ -0.51
LINC00963-217ENST00000624009 TRBC2A0A5B9 178 aa11.83□□□□□ -0.52
LINC00963-217ENST00000624009 CXorf49A8MYA2 514 aaPredicted RBP11.83□□□□□ -0.52
LINC00963-217ENST00000624009 DPM1O60762 260 aa11.83□□□□□ -0.52
LINC00963-217ENST00000624009 MED26O95402 600 aa11.83□□□□□ -0.52
LINC00963-217ENST00000624009 ALPPP05187 535 aa11.83□□□□□ -0.52
LINC00963-217ENST00000624009 ZGLP1P0C6A0 271 aa11.83□□□□□ -0.52
LINC00963-217ENST00000624009 SLC35G6P0C7Q6 338 aa11.83□□□□□ -0.52
LINC00963-217ENST00000624009 STMN1P16949 149 aa11.83□□□□□ -0.52
LINC00963-217ENST00000624009 FBLP22087 321 aaKnown RBP11.83□□□□□ -0.52
LINC00963-217ENST00000624009 IL10P22301 178 aa11.83□□□□□ -0.52
LINC00963-217ENST00000624009 GSTM2P28161 218 aa11.83□□□□□ -0.52
LINC00963-217ENST00000624009 AHRP35869 848 aa11.83□□□□□ -0.52
LINC00963-217ENST00000624009 GGT5P36269 586 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms