RNA–Protein interactions for RNA: ENST00000622533.4

CHD1L-210, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 5

Gene CHD1L, Length 2,937 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-210ENST00000622533 PYURFQ96I23 114 aa12.64□□□□□ -0.39
CHD1L-210ENST00000622533 FAM126AQ9BYI3 521 aaPredicted RBP12.64□□□□□ -0.39
CHD1L-210ENST00000622533 GABARAPL1Q9H0R8 117 aa12.64□□□□□ -0.39
CHD1L-210ENST00000622533 SIRT5Q9NXA8 310 aa12.64□□□□□ -0.39
CHD1L-210ENST00000622533 TRPS1Q9UHF7 1281 aa12.64□□□□□ -0.39
CHD1L-210ENST00000622533 GRIP1Q9Y3R0 1128 aa12.64□□□□□ -0.39
CHD1L-210ENST00000622533 OARD1Q9Y530 152 aa12.64□□□□□ -0.39
CHD1L-210ENST00000622533 SCN10AQ9Y5Y9 1956 aa12.64□□□□□ -0.39
CHD1L-210ENST00000622533 MYADML2A6NDP7 307 aa12.64□□□□□ -0.39
CHD1L-210ENST00000622533 POLR1CO15160 346 aaPredicted RBP12.64□□□□□ -0.39
CHD1L-210ENST00000622533 KIAA0513O60268 411 aa12.64□□□□□ -0.39
CHD1L-210ENST00000622533 ACSL4O60488 711 aa12.64□□□□□ -0.39
CHD1L-210ENST00000622533 ZNF780AO75290 641 aaPredicted RBP12.64□□□□□ -0.39
CHD1L-210ENST00000622533 SEC22BO75396 215 aa12.64□□□□□ -0.39
CHD1L-210ENST00000622533 SNX4O95219 450 aa12.64□□□□□ -0.39
CHD1L-210ENST00000622533 B3GALT4O96024 378 aa12.64□□□□□ -0.39
CHD1L-210ENST00000622533 CSF2P04141 144 aa12.64□□□□□ -0.39
CHD1L-210ENST00000622533 HNF4AP41235 474 aa12.64□□□□□ -0.39
CHD1L-210ENST00000622533 PIK3CGP48736 1102 aa12.64□□□□□ -0.39
CHD1L-210ENST00000622533 SLC11A2P49281 568 aa12.64□□□□□ -0.39
CHD1L-210ENST00000622533 ARHGEF6Q15052 776 aa12.64□□□□□ -0.39
CHD1L-210ENST00000622533 SPANXN4Q5MJ08 99 aa12.64□□□□□ -0.39
CHD1L-210ENST00000622533 SPRYD7Q5W111 196 aa12.64□□□□□ -0.39
CHD1L-210ENST00000622533 GPR153Q6NV75 609 aa12.64□□□□□ -0.39
CHD1L-210ENST00000622533 CXCL17Q6UXB2 119 aa12.64□□□□□ -0.39
CHD1L-210ENST00000622533 PAMR1Q6UXH9 720 aa12.64□□□□□ -0.39
CHD1L-210ENST00000622533 P3H2Q8IVL5 708 aa12.64□□□□□ -0.39
CHD1L-210ENST00000622533 TMEM132CQ8N3T6 1108 aa12.64□□□□□ -0.39
CHD1L-210ENST00000622533 ZNF675Q8TD23 568 aa12.64□□□□□ -0.39
CHD1L-210ENST00000622533 FAM120BQ96EK7 910 aaKnown RBP12.64□□□□□ -0.39
CHD1L-210ENST00000622533 CCDC120Q96HB5 630 aa12.64□□□□□ -0.39
CHD1L-210ENST00000622533 PTPN18Q99952 460 aa12.64□□□□□ -0.39
CHD1L-210ENST00000622533 ATP13A2Q9NQ11 1180 aa12.64□□□□□ -0.39
CHD1L-210ENST00000622533 KRT84Q9NSB2 600 aa12.64□□□□□ -0.39
CHD1L-210ENST00000622533 C1orf109Q9NX04 203 aa12.64□□□□□ -0.39
CHD1L-210ENST00000622533 CCDC59Q9P031 241 aaKnown RBP12.64□□□□□ -0.39
CHD1L-210ENST00000622533 VPS4AQ9UN37 437 aa12.64□□□□□ -0.39
CHD1L-210ENST00000622533 GABRQQ9UN88 632 aa12.64□□□□□ -0.39
CHD1L-210ENST00000622533 TTC3P53804 2025 aa12.63□□□□□ -0.39
CHD1L-210ENST00000622533 ULK1O75385 1050 aa12.63□□□□□ -0.39
CHD1L-210ENST00000622533 PTHP01270 115 aa12.63□□□□□ -0.39
CHD1L-210ENST00000622533 STSP08842 583 aa12.63□□□□□ -0.39
CHD1L-210ENST00000622533 ZNF7P17097 686 aaPredicted RBP12.63□□□□□ -0.39
CHD1L-210ENST00000622533 RPS3P23396 243 aaKnown RBP eCLIP12.63□□□□□ -0.39
CHD1L-210ENST00000622533 RGRP47804 291 aa12.63□□□□□ -0.39
CHD1L-210ENST00000622533 DSC1Q08554 894 aa12.63□□□□□ -0.39
CHD1L-210ENST00000622533 CTXN3Q4LDR2 81 aa12.63□□□□□ -0.39
CHD1L-210ENST00000622533 ARMCX4Q5H9R4 360 aa12.63□□□□□ -0.39
CHD1L-210ENST00000622533 PXDC1Q5TGL8 231 aa12.63□□□□□ -0.39
CHD1L-210ENST00000622533 KIAA1614Q5VZ46 1190 aa12.63□□□□□ -0.39
CHD1L-210ENST00000622533 TSPYL5Q86VY4 417 aaPredicted RBP12.63□□□□□ -0.39
CHD1L-210ENST00000622533 CALHM3Q86XJ0 350 aa12.63□□□□□ -0.39
CHD1L-210ENST00000622533 LIX1Q8N485 282 aa12.63□□□□□ -0.39
CHD1L-210ENST00000622533 UBTD2Q8WUN7 234 aa12.63□□□□□ -0.39
CHD1L-210ENST00000622533 IPCEF1Q8WWN9 437 aaPredicted RBP12.63□□□□□ -0.39
CHD1L-210ENST00000622533 OR52E6Q96RD3 313 aa12.63□□□□□ -0.39
CHD1L-210ENST00000622533 TTPALQ9BTX7 342 aa12.63□□□□□ -0.39
CHD1L-210ENST00000622533 LRTM1Q9HBL6 345 aa12.63□□□□□ -0.39
CHD1L-210ENST00000622533 GPR83Q9NYM4 423 aa12.63□□□□□ -0.39
CHD1L-210ENST00000622533 TEKT2Q9UIF3 430 aa12.63□□□□□ -0.39
CHD1L-210ENST00000622533 SAMD4AQ9UPU9 718 aaKnown RBP12.63□□□□□ -0.39
CHD1L-210ENST00000622533 A3GALT2U3KPV4 340 aa12.63□□□□□ -0.39
CHD1L-210ENST00000622533 PER2O15055 1255 aa12.63□□□□□ -0.39
CHD1L-210ENST00000622533 TLR5O60602 858 aa12.63□□□□□ -0.39
CHD1L-210ENST00000622533 EOMESO95936 686 aa12.63□□□□□ -0.39
CHD1L-210ENST00000622533 C1QCP02747 245 aa12.63□□□□□ -0.39
CHD1L-210ENST00000622533 EBLN1P0CF75 366 aa12.63□□□□□ -0.39
CHD1L-210ENST00000622533 ITGA2P17301 1181 aa12.63□□□□□ -0.39
CHD1L-210ENST00000622533 PIK3CBP42338 1070 aa12.63□□□□□ -0.39
CHD1L-210ENST00000622533 SMARCB1Q12824 385 aa12.63□□□□□ -0.39
CHD1L-210ENST00000622533 PROX2Q3B8N5 592 aa12.63□□□□□ -0.39
CHD1L-210ENST00000622533 FAM171A1Q5VUB5 890 aa12.63□□□□□ -0.39
CHD1L-210ENST00000622533 PTRHD1Q6GMV3 140 aaKnown RBP12.63□□□□□ -0.39
CHD1L-210ENST00000622533 OR2T5Q6IEZ7 315 aa12.63□□□□□ -0.39
CHD1L-210ENST00000622533 CFAP52Q8N1V2 620 aa12.63□□□□□ -0.39
CHD1L-210ENST00000622533 EFHBQ8N7U6 833 aa12.63□□□□□ -0.39
CHD1L-210ENST00000622533 DTX3Q8N9I9 347 aa12.63□□□□□ -0.39
CHD1L-210ENST00000622533 OR2T29Q8NH02 315 aa12.63□□□□□ -0.39
CHD1L-210ENST00000622533 SOCS4Q8WXH5 440 aa12.63□□□□□ -0.39
CHD1L-210ENST00000622533 TMCO6Q96DC7 493 aa12.63□□□□□ -0.39
CHD1L-210ENST00000622533 MYEOVQ96EZ4 313 aa12.63□□□□□ -0.39
CHD1L-210ENST00000622533 RIPOR3Q96MK2 946 aa12.63□□□□□ -0.39
CHD1L-210ENST00000622533 KCNC2Q96PR1 638 aa12.63□□□□□ -0.39
CHD1L-210ENST00000622533 SLC29A3Q9BZD2 475 aa12.63□□□□□ -0.39
CHD1L-210ENST00000622533 KCNH6Q9H252 994 aa12.63□□□□□ -0.39
CHD1L-210ENST00000622533 ZMYM5Q9UJ78 669 aa12.63□□□□□ -0.39
CHD1L-210ENST00000622533 MAN2B2Q9Y2E5 1009 aa12.63□□□□□ -0.39
CHD1L-210ENST00000622533 CHD5Q8TDI0 1954 aa12.63□□□□□ -0.39
CHD1L-210ENST00000622533 TRBV5-3A0A0A0MS03 114 aa12.62□□□□□ -0.39
CHD1L-210ENST00000622533 SLITRK5O94991 958 aa12.62□□□□□ -0.39
CHD1L-210ENST00000622533 DGKAP23743 735 aa12.62□□□□□ -0.39
CHD1L-210ENST00000622533 PKLRP30613 574 aa12.62□□□□□ -0.39
CHD1L-210ENST00000622533 MAGEA2P43356 314 aa12.62□□□□□ -0.39
CHD1L-210ENST00000622533 TGM4P49221 684 aa12.62□□□□□ -0.39
CHD1L-210ENST00000622533 EFR3AQ14156 821 aa12.62□□□□□ -0.39
CHD1L-210ENST00000622533 LRIF1Q5T3J3 769 aa12.62□□□□□ -0.39
CHD1L-210ENST00000622533 C9orf131Q5VYM1 1079 aa12.62□□□□□ -0.39
CHD1L-210ENST00000622533 KLHDC9Q8NEP7 349 aa12.62□□□□□ -0.39
CHD1L-210ENST00000622533 GPR151Q8TDV0 419 aa12.62□□□□□ -0.39
CHD1L-210ENST00000622533 NTMT1Q9BV86 223 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms