RNA–Protein interactions for RNA: ENST00000622138.4

TRIM49B-202, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-202ENST00000622138 RPS27LQ71UM5 84 aaKnown RBP7.28□□□□□ -1.24
TRIM49B-202ENST00000622138 GPR155Q7Z3F1 870 aa7.28□□□□□ -1.24
TRIM49B-202ENST00000622138 HIPK1Q86Z02 1210 aa7.28□□□□□ -1.24
TRIM49B-202ENST00000622138 MIER2Q8N344 545 aa7.28□□□□□ -1.24
TRIM49B-202ENST00000622138 FSTL5Q8N475 847 aaPredicted RBP7.28□□□□□ -1.24
TRIM49B-202ENST00000622138 PNPLA1Q8N8W4 532 aa7.28□□□□□ -1.24
TRIM49B-202ENST00000622138 SRFBP1Q8NEF9 429 aaKnown RBP7.28□□□□□ -1.24
TRIM49B-202ENST00000622138 NLGN4YQ8NFZ3 816 aaPredicted RBP7.28□□□□□ -1.24
TRIM49B-202ENST00000622138 OR6S1Q8NH40 331 aa7.28□□□□□ -1.24
TRIM49B-202ENST00000622138 ITFG1Q8TB96 612 aa7.28□□□□□ -1.24
TRIM49B-202ENST00000622138 GANCQ8TET4 914 aa7.28□□□□□ -1.24
TRIM49B-202ENST00000622138 GTF3C2Q8WUA4 911 aaPredicted RBP7.28□□□□□ -1.24
TRIM49B-202ENST00000622138 EDEM1Q92611 657 aa7.28□□□□□ -1.24
TRIM49B-202ENST00000622138 CCDC126Q96EE4 140 aa7.28□□□□□ -1.24
TRIM49B-202ENST00000622138 RADILQ96JH8 1075 aa7.28□□□□□ -1.24
TRIM49B-202ENST00000622138 NECTIN4Q96NY8 510 aa7.28□□□□□ -1.24
TRIM49B-202ENST00000622138 MCCC1Q96RQ3 725 aaPredicted RBP7.28□□□□□ -1.24
TRIM49B-202ENST00000622138 SMOQ99835 787 aa7.28□□□□□ -1.24
TRIM49B-202ENST00000622138 MED10Q9BTT4 135 aa7.28□□□□□ -1.24
TRIM49B-202ENST00000622138 GABARAPL1Q9H0R8 117 aa7.28□□□□□ -1.24
TRIM49B-202ENST00000622138 RHOJQ9H4E5 214 aa7.28□□□□□ -1.24
TRIM49B-202ENST00000622138 IL1RL2Q9HB29 575 aa7.28□□□□□ -1.24
TRIM49B-202ENST00000622138 NSMCE4AQ9NXX6 385 aa7.28□□□□□ -1.24
TRIM49B-202ENST00000622138 TRPM5Q9NZQ8 1165 aa7.28□□□□□ -1.24
TRIM49B-202ENST00000622138 SLC2A6Q9UGQ3 507 aa7.28□□□□□ -1.24
TRIM49B-202ENST00000622138 GPN3Q9UHW5 284 aaPredicted RBP7.28□□□□□ -1.24
TRIM49B-202ENST00000622138 SPATA2Q9UM82 520 aa7.28□□□□□ -1.24
TRIM49B-202ENST00000622138 VPS9D1Q9Y2B5 631 aa7.28□□□□□ -1.24
TRIM49B-202ENST00000622138 MAB21L2Q9Y586 359 aa7.28□□□□□ -1.24
TRIM49B-202ENST00000622138 OAS3Q9Y6K5 1087 aaKnown RBP7.28□□□□□ -1.24
TRIM49B-202ENST00000622138 DNAH12Q6ZR08 3092 aa7.28□□□□□ -1.24
TRIM49B-202ENST00000622138 FNDC1Q4ZHG4 1894 aaPredicted RBP7.28□□□□□ -1.24
TRIM49B-202ENST00000622138 SLC22A23A1A5C7 686 aa7.27□□□□□ -1.24
TRIM49B-202ENST00000622138 GRXCR2A6NFK2 248 aa7.27□□□□□ -1.24
TRIM49B-202ENST00000622138 MEIS3P2A8K0S8 358 aa7.27□□□□□ -1.24
TRIM49B-202ENST00000622138 MPTX1A8MV57 137 aa7.27□□□□□ -1.24
TRIM49B-202ENST00000622138 DFFAO00273 331 aa7.27□□□□□ -1.24
TRIM49B-202ENST00000622138 PTGESO14684 152 aa7.27□□□□□ -1.24
TRIM49B-202ENST00000622138 SIGLEC6O43699 453 aa7.27□□□□□ -1.24
TRIM49B-202ENST00000622138 NOBOXO60393 691 aa7.27□□□□□ -1.24
TRIM49B-202ENST00000622138 MT-CYBP00156 380 aaPredicted RBP7.27□□□□□ -1.24
TRIM49B-202ENST00000622138 HLA-DQB1P01920 261 aa7.27□□□□□ -1.24
TRIM49B-202ENST00000622138 USP17L7P0C7H9 530 aa7.27□□□□□ -1.24
TRIM49B-202ENST00000622138 KCNE1P15382 129 aa7.27□□□□□ -1.24
TRIM49B-202ENST00000622138 MAP2K3P46734 347 aa7.27□□□□□ -1.24
TRIM49B-202ENST00000622138 MRPL19P49406 292 aaKnown RBP7.27□□□□□ -1.24
TRIM49B-202ENST00000622138 AIF1P55008 147 aa7.27□□□□□ -1.24
TRIM49B-202ENST00000622138 DAOAP59103 153 aa7.27□□□□□ -1.24
TRIM49B-202ENST00000622138 CREMQ03060 361 aa7.27□□□□□ -1.24
TRIM49B-202ENST00000622138 LGALS3BPQ08380 585 aa7.27□□□□□ -1.24
TRIM49B-202ENST00000622138 CTBP1Q13363 440 aa7.27□□□□□ -1.24
TRIM49B-202ENST00000622138 NFYCQ13952 458 aa7.27□□□□□ -1.24
TRIM49B-202ENST00000622138 LARS2Q15031 903 aaKnown RBP7.27□□□□□ -1.24
TRIM49B-202ENST00000622138 UGT3A2Q3SY77 523 aa7.27□□□□□ -1.24
TRIM49B-202ENST00000622138 HES5Q5TA89 166 aa7.27□□□□□ -1.24
TRIM49B-202ENST00000622138 MZT2BQ6NZ67 158 aa7.27□□□□□ -1.24
TRIM49B-202ENST00000622138 RTL4Q6ZR62 310 aa7.27□□□□□ -1.24
TRIM49B-202ENST00000622138 ASPGQ86U10 573 aa7.27□□□□□ -1.24
TRIM49B-202ENST00000622138 ADHFE1Q8IWW8 467 aa7.27□□□□□ -1.24
TRIM49B-202ENST00000622138 ZZZ3Q8IYH5 903 aa7.27□□□□□ -1.24
TRIM49B-202ENST00000622138 DUSP18Q8NEJ0 188 aa7.27□□□□□ -1.24
TRIM49B-202ENST00000622138 KCTD13Q8WZ19 329 aa7.27□□□□□ -1.24
TRIM49B-202ENST00000622138 PMM1Q92871 262 aa7.27□□□□□ -1.24
TRIM49B-202ENST00000622138 NTAN1Q96AB6 310 aa7.27□□□□□ -1.24
TRIM49B-202ENST00000622138 RAD51AP1Q96B01 352 aa7.27□□□□□ -1.24
TRIM49B-202ENST00000622138 ZFP42Q96MM3 310 aa7.27□□□□□ -1.24
TRIM49B-202ENST00000622138 Q96MT0 163 aa7.27□□□□□ -1.24
TRIM49B-202ENST00000622138 FAM129BQ96TA1 746 aa7.27□□□□□ -1.24
TRIM49B-202ENST00000622138 ZNF251Q9BRH9 671 aa7.27□□□□□ -1.24
TRIM49B-202ENST00000622138 BBS2Q9BXC9 721 aa7.27□□□□□ -1.24
TRIM49B-202ENST00000622138 REG4Q9BYZ8 158 aa7.27□□□□□ -1.24
TRIM49B-202ENST00000622138 GSX2Q9BZM3 304 aa7.27□□□□□ -1.24
TRIM49B-202ENST00000622138 BCL2L14Q9BZR8 327 aa7.27□□□□□ -1.24
TRIM49B-202ENST00000622138 TINAGL1Q9GZM7 467 aaPredicted RBP7.27□□□□□ -1.24
TRIM49B-202ENST00000622138 SYNDIG1Q9H7V2 258 aa7.27□□□□□ -1.24
TRIM49B-202ENST00000622138 EMC7Q9NPA0 242 aa7.27□□□□□ -1.24
TRIM49B-202ENST00000622138 LTB4R2Q9NPC1 389 aa7.27□□□□□ -1.24
TRIM49B-202ENST00000622138 BIN3Q9NQY0 253 aa7.27□□□□□ -1.24
TRIM49B-202ENST00000622138 DDIT4Q9NX09 232 aa7.27□□□□□ -1.24
TRIM49B-202ENST00000622138 SDHAF2Q9NX18 166 aa7.27□□□□□ -1.24
TRIM49B-202ENST00000622138 MUTYHQ9UIF7 546 aa7.27□□□□□ -1.24
TRIM49B-202ENST00000622138 FBXW11Q9UKB1 542 aa7.27□□□□□ -1.24
TRIM49B-202ENST00000622138 ABCG2Q9UNQ0 655 aa7.27□□□□□ -1.24
TRIM49B-202ENST00000622138 PLCL2Q9UPR0 1127 aa7.27□□□□□ -1.24
TRIM49B-202ENST00000622138 NEU3Q9UQ49 428 aa7.27□□□□□ -1.24
TRIM49B-202ENST00000622138 RUVBL2Q9Y230 463 aaKnown RBP7.27□□□□□ -1.24
TRIM49B-202ENST00000622138 TIMM13Q9Y5L4 95 aaPredicted RBP7.27□□□□□ -1.24
TRIM49B-202ENST00000622138 MAGED1Q9Y5V3 778 aaPredicted RBP7.27□□□□□ -1.24
TRIM49B-202ENST00000622138 TRIP12Q14669 1992 aaPredicted RBP7.27□□□□□ -1.25
TRIM49B-202ENST00000622138 A0A1W2PPL8 197 aa7.27□□□□□ -1.25
TRIM49B-202ENST00000622138 SLC12A8A0AV02 714 aa7.27□□□□□ -1.25
TRIM49B-202ENST00000622138 TMEM82A0PJX8 343 aa7.27□□□□□ -1.25
TRIM49B-202ENST00000622138 WRBO00258 174 aa7.27□□□□□ -1.25
TRIM49B-202ENST00000622138 ANKRD28O15084 1053 aa7.27□□□□□ -1.25
TRIM49B-202ENST00000622138 ORC5O43913 435 aa7.27□□□□□ -1.25
TRIM49B-202ENST00000622138 HCN1O60741 890 aa7.27□□□□□ -1.25
TRIM49B-202ENST00000622138 CST1P01037 141 aa7.27□□□□□ -1.25
TRIM49B-202ENST00000622138 NPPAP01160 153 aa7.27□□□□□ -1.25
TRIM49B-202ENST00000622138 DNTTP04053 509 aa7.27□□□□□ -1.25
TRIM49B-202ENST00000622138 CYBBP04839 570 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms