RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 C10orf53Q8N6V4 93 aa6.76□□□□□ -1.33
NEDD9-216ENST00000620854 AMER2Q8N7J2 671 aa6.76□□□□□ -1.33
NEDD9-216ENST00000620854 OR2T29Q8NH02 315 aa6.76□□□□□ -1.33
NEDD9-216ENST00000620854 ENKURQ8TC29 256 aa6.76□□□□□ -1.33
NEDD9-216ENST00000620854 MAL2Q969L2 176 aa6.76□□□□□ -1.33
NEDD9-216ENST00000620854 EFHD2Q96C19 240 aaPredicted RBP6.76□□□□□ -1.33
NEDD9-216ENST00000620854 YIPF6Q96EC8 236 aa6.76□□□□□ -1.33
NEDD9-216ENST00000620854 BTN2A3PQ96KV6 586 aa6.76□□□□□ -1.33
NEDD9-216ENST00000620854 TIGARQ9NQ88 270 aa6.76□□□□□ -1.33
NEDD9-216ENST00000620854 TRPV5Q9NQA5 729 aa6.76□□□□□ -1.33
NEDD9-216ENST00000620854 KLHL1Q9NR64 748 aa6.76□□□□□ -1.33
NEDD9-216ENST00000620854 C1orf109Q9NX04 203 aa6.76□□□□□ -1.33
NEDD9-216ENST00000620854 SIRT5Q9NXA8 310 aa6.76□□□□□ -1.33
NEDD9-216ENST00000620854 GPRC5BQ9NZH0 403 aa6.76□□□□□ -1.33
NEDD9-216ENST00000620854 MRPS23Q9Y3D9 190 aaKnown RBP6.76□□□□□ -1.33
NEDD9-216ENST00000620854 TANC1Q9C0D5 1861 aa6.75□□□□□ -1.33
NEDD9-216ENST00000620854 CENPXA8MT69 81 aa6.75□□□□□ -1.33
NEDD9-216ENST00000620854 KPNA3O00505 521 aaPredicted RBP6.75□□□□□ -1.33
NEDD9-216ENST00000620854 OR7A17O14581 309 aa6.75□□□□□ -1.33
NEDD9-216ENST00000620854 RFXANKO14593 260 aa6.75□□□□□ -1.33
NEDD9-216ENST00000620854 ZW10O43264 779 aa6.75□□□□□ -1.33
NEDD9-216ENST00000620854 FHP07954 510 aa6.75□□□□□ -1.33
NEDD9-216ENST00000620854 ANXA5P08758 320 aa6.75□□□□□ -1.33
NEDD9-216ENST00000620854 GABRR2P28476 465 aa6.75□□□□□ -1.33
NEDD9-216ENST00000620854 GNPDA1P46926 289 aa6.75□□□□□ -1.33
NEDD9-216ENST00000620854 OR1E2P47887 323 aa6.75□□□□□ -1.33
NEDD9-216ENST00000620854 ZNF33AQ06730 810 aa6.75□□□□□ -1.33
NEDD9-216ENST00000620854 ZFP69Q49AA0 526 aa6.75□□□□□ -1.33
NEDD9-216ENST00000620854 SYT6Q5T7P8 510 aaPredicted RBP6.75□□□□□ -1.33
NEDD9-216ENST00000620854 PSRC1Q6PGN9 363 aaPredicted RBP6.75□□□□□ -1.33
NEDD9-216ENST00000620854 CYP2U1Q7Z449 544 aa6.75□□□□□ -1.33
NEDD9-216ENST00000620854 LUZP2Q86TE4 346 aa6.75□□□□□ -1.33
NEDD9-216ENST00000620854 CCDC71Q8IV32 467 aaPredicted RBP6.75□□□□□ -1.33
NEDD9-216ENST00000620854 DPP10Q8N608 796 aa6.75□□□□□ -1.33
NEDD9-216ENST00000620854 LILRB4Q8NHJ6 448 aa6.75□□□□□ -1.33
NEDD9-216ENST00000620854 FUBP3Q96I24 572 aaKnown RBP eCLIP6.75□□□□□ -1.339e-9■■■□□ 15.5
NEDD9-216ENST00000620854 SUSD3Q96L08 255 aa6.75□□□□□ -1.33
NEDD9-216ENST00000620854 VPS35Q96QK1 796 aa6.75□□□□□ -1.33
NEDD9-216ENST00000620854 ACAT2Q9BWD1 397 aa6.75□□□□□ -1.33
NEDD9-216ENST00000620854 BOCQ9BWV1 1114 aa6.75□□□□□ -1.33
NEDD9-216ENST00000620854 DUSP21Q9H596 190 aa6.75□□□□□ -1.33
NEDD9-216ENST00000620854 GORASP2Q9H8Y8 452 aa6.75□□□□□ -1.33
NEDD9-216ENST00000620854 AASDHPPTQ9NRN7 309 aa6.75□□□□□ -1.33
NEDD9-216ENST00000620854 RAD18Q9NS91 495 aa6.75□□□□□ -1.33
NEDD9-216ENST00000620854 SLC25A13Q9UJS0 675 aa6.75□□□□□ -1.33
NEDD9-216ENST00000620854 DLGAP4Q9Y2H0 992 aa6.75□□□□□ -1.33
NEDD9-216ENST00000620854 PRKAB1Q9Y478 270 aa6.75□□□□□ -1.33
NEDD9-216ENST00000620854 DNAH14Q0VDD8 3507 aa6.75□□□□□ -1.33
NEDD9-216ENST00000620854 TRAV19A0A0A6YYK7 116 aa6.75□□□□□ -1.33
NEDD9-216ENST00000620854 LOC285095A0A1B0GVY8 99 aa6.75□□□□□ -1.33
NEDD9-216ENST00000620854 H3BM21 787 aa6.75□□□□□ -1.33
NEDD9-216ENST00000620854 FFAR2O15552 330 aa6.75□□□□□ -1.33
NEDD9-216ENST00000620854 ZNF623O75123 536 aa6.75□□□□□ -1.33
NEDD9-216ENST00000620854 HPRP00739 348 aa6.75□□□□□ -1.33
NEDD9-216ENST00000620854 IFI30P13284 250 aa6.75□□□□□ -1.33
NEDD9-216ENST00000620854 DDX5P17844 614 aaKnown RBP6.75□□□□□ -1.33
NEDD9-216ENST00000620854 RPL17P18621 184 aaKnown RBP6.75□□□□□ -1.33
NEDD9-216ENST00000620854 CTSKP43235 329 aa6.75□□□□□ -1.33
NEDD9-216ENST00000620854 HNRNPFP52597 415 aaKnown RBP6.75□□□□□ -1.33
NEDD9-216ENST00000620854 SRP54P61011 504 aaKnown RBP6.75□□□□□ -1.33
NEDD9-216ENST00000620854 NKX3-2P78367 333 aa6.75□□□□□ -1.33
NEDD9-216ENST00000620854 ACOX1Q15067 660 aa6.75□□□□□ -1.33
NEDD9-216ENST00000620854 SMUG1Q53HV7 270 aa6.75□□□□□ -1.33
NEDD9-216ENST00000620854 RUNDC3AQ59EK9 446 aa6.75□□□□□ -1.33
NEDD9-216ENST00000620854 KLHL17Q6TDP4 642 aa6.75□□□□□ -1.33
NEDD9-216ENST00000620854 PGBD3Q8N328 593 aa6.75□□□□□ -1.33
NEDD9-216ENST00000620854 FBXO22Q8NEZ5 403 aa6.75□□□□□ -1.33
NEDD9-216ENST00000620854 PJA1Q8NG27 643 aa6.75□□□□□ -1.33
NEDD9-216ENST00000620854 VANGL1Q8TAA9 524 aaPredicted RBP6.75□□□□□ -1.33
NEDD9-216ENST00000620854 CD200R1Q8TD46 325 aa6.75□□□□□ -1.33
NEDD9-216ENST00000620854 PHF10Q8WUB8 498 aaKnown RBP6.75□□□□□ -1.33
NEDD9-216ENST00000620854 DHRS1Q96LJ7 313 aa6.75□□□□□ -1.33
NEDD9-216ENST00000620854 APOLD1Q96LR9 279 aa6.75□□□□□ -1.33
NEDD9-216ENST00000620854 NUSAP1Q9BXS6 441 aaKnown RBP6.75□□□□□ -1.33
NEDD9-216ENST00000620854 ITPAQ9BY32 194 aa6.75□□□□□ -1.33
NEDD9-216ENST00000620854 MMP28Q9H239 520 aa6.75□□□□□ -1.33
NEDD9-216ENST00000620854 LRTM1Q9HBL6 345 aa6.75□□□□□ -1.33
NEDD9-216ENST00000620854 CPNE5Q9HCH3 593 aa6.75□□□□□ -1.33
NEDD9-216ENST00000620854 TNPO3Q9Y5L0 923 aaKnown RBP6.75□□□□□ -1.33
NEDD9-216ENST00000620854 CCDC88CQ9P219 2028 aa6.75□□□□□ -1.33
NEDD9-216ENST00000620854 RP1L1Q8IWN7 2480 aaPredicted RBP6.75□□□□□ -1.33
NEDD9-216ENST00000620854 H0YC42 278 aa6.75□□□□□ -1.33
NEDD9-216ENST00000620854 MYL12BO14950 172 aa6.75□□□□□ -1.33
NEDD9-216ENST00000620854 SCELO95171 688 aa6.75□□□□□ -1.33
NEDD9-216ENST00000620854 TSPAN12O95859 305 aa6.75□□□□□ -1.33
NEDD9-216ENST00000620854 IFNA14P01570 189 aa6.75□□□□□ -1.33
NEDD9-216ENST00000620854 FGF1P05230 155 aa6.75□□□□□ -1.33
NEDD9-216ENST00000620854 HOXB8P17481 243 aaPredicted RBP6.75□□□□□ -1.33
NEDD9-216ENST00000620854 CYP2A7P20853 494 aa6.75□□□□□ -1.33
NEDD9-216ENST00000620854 IGFBP4P22692 258 aa6.75□□□□□ -1.33
NEDD9-216ENST00000620854 RYKP34925 604 aa6.75□□□□□ -1.33
NEDD9-216ENST00000620854 KCNQ1P51787 676 aa6.75□□□□□ -1.33
NEDD9-216ENST00000620854 RPS24P62847 133 aaKnown RBP6.75□□□□□ -1.33
NEDD9-216ENST00000620854 CD83Q01151 205 aa6.75□□□□□ -1.33
NEDD9-216ENST00000620854 KRR1Q13601 381 aaKnown RBP6.75□□□□□ -1.33
NEDD9-216ENST00000620854 MAD2L1BPQ15013 274 aaPredicted RBP6.75□□□□□ -1.33
NEDD9-216ENST00000620854 ZMAT1Q5H9K5 638 aa6.75□□□□□ -1.33
NEDD9-216ENST00000620854 SDE2Q6IQ49 451 aa6.75□□□□□ -1.33
NEDD9-216ENST00000620854 PRSS55Q6UWB4 352 aaPredicted RBP6.75□□□□□ -1.33
NEDD9-216ENST00000620854 AGMOQ6ZNB7 445 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms