RNA–Protein interactions for RNA: ENST00000619485.4

TP53-225, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,506 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-225ENST00000619485 CXorf57Q6NSI4 855 aaKnown RBP10.03□□□□□ -0.8
TP53-225ENST00000619485 ANKRD33Q7Z3H0 272 aa10.03□□□□□ -0.8
TP53-225ENST00000619485 AKAP14Q86UN6 197 aa10.03□□□□□ -0.8
TP53-225ENST00000619485 CCDC103Q8IW40 242 aa10.03□□□□□ -0.8
TP53-225ENST00000619485 CLIP4Q8N3C7 705 aa10.03□□□□□ -0.8
TP53-225ENST00000619485 OR52J3Q8NH60 311 aa10.03□□□□□ -0.8
TP53-225ENST00000619485 STARD8Q92502 1023 aa10.03□□□□□ -0.8
TP53-225ENST00000619485 ZNF566Q969W8 418 aa10.03□□□□□ -0.8
TP53-225ENST00000619485 ROGDIQ9GZN7 287 aa10.03□□□□□ -0.8
TP53-225ENST00000619485 KCNH6Q9H252 994 aa10.03□□□□□ -0.8
TP53-225ENST00000619485 DUSP21Q9H596 190 aa10.03□□□□□ -0.8
TP53-225ENST00000619485 RC3H2Q9HBD1 1191 aaKnown RBP10.03□□□□□ -0.8
TP53-225ENST00000619485 IL1RAPQ9NPH3 570 aa10.03□□□□□ -0.8
TP53-225ENST00000619485 THUMPD1Q9NXG2 353 aaKnown RBP10.03□□□□□ -0.8
TP53-225ENST00000619485 PCDHB1Q9Y5F3 818 aa10.03□□□□□ -0.8
TP53-225ENST00000619485 HCFC2Q9Y5Z7 792 aa10.03□□□□□ -0.8
TP53-225ENST00000619485 GBF1Q92538 1859 aa10.03□□□□□ -0.8
TP53-225ENST00000619485 M0QX08 132 aa10.03□□□□□ -0.8
TP53-225ENST00000619485 FPGTO14772 594 aa10.03□□□□□ -0.8
TP53-225ENST00000619485 SNPHO15079 494 aa10.03□□□□□ -0.8
TP53-225ENST00000619485 TEX28O15482 410 aa10.03□□□□□ -0.8
TP53-225ENST00000619485 SMAD6O43541 496 aaKnown RBP10.03□□□□□ -0.8
TP53-225ENST00000619485 GREM1O60565 184 aa10.03□□□□□ -0.8
TP53-225ENST00000619485 CLDN11O75508 207 aa10.03□□□□□ -0.8
TP53-225ENST00000619485 CLDN7O95471 211 aa10.03□□□□□ -0.8
TP53-225ENST00000619485 NTRK1P04629 796 aa10.03□□□□□ -0.8
TP53-225ENST00000619485 EBLN1P0CF75 366 aa10.03□□□□□ -0.8
TP53-225ENST00000619485 ITPKAP23677 461 aa10.03□□□□□ -0.8
TP53-225ENST00000619485 DNAJA1P31689 397 aaKnown RBP10.03□□□□□ -0.8
TP53-225ENST00000619485 NR4A2P43354 598 aa10.03□□□□□ -0.8
TP53-225ENST00000619485 MVKQ03426 396 aa10.03□□□□□ -0.8
TP53-225ENST00000619485 ABHD18Q0P651 414 aa10.03□□□□□ -0.8
TP53-225ENST00000619485 NFATC2Q13469 925 aa10.03□□□□□ -0.8
TP53-225ENST00000619485 SF3B4Q15427 424 aaKnown RBP eCLIP10.03□□□□□ -0.88e-8■■■■□ 21.4
TP53-225ENST00000619485 ATAD3BQ5T9A4 648 aa10.03□□□□□ -0.8
TP53-225ENST00000619485 STEAP3Q658P3 488 aa10.03□□□□□ -0.8
TP53-225ENST00000619485 KDM4DQ6B0I6 523 aa10.03□□□□□ -0.8
TP53-225ENST00000619485 SNX20Q7Z614 316 aa10.03□□□□□ -0.8
TP53-225ENST00000619485 DNAJB7Q7Z6W7 309 aaPredicted RBP10.03□□□□□ -0.8
TP53-225ENST00000619485 HEATR4Q86WZ0 1026 aa10.03□□□□□ -0.8
TP53-225ENST00000619485 CCDC71Q8IV32 467 aaPredicted RBP10.03□□□□□ -0.8
TP53-225ENST00000619485 RBFAQ8N0V3 343 aa10.03□□□□□ -0.8
TP53-225ENST00000619485 SLC39A11Q8N1S5 342 aa10.03□□□□□ -0.8
TP53-225ENST00000619485 MINDY2Q8NBR6 621 aa10.03□□□□□ -0.8
TP53-225ENST00000619485 LSM14AQ8ND56 463 aaKnown RBP10.03□□□□□ -0.8
TP53-225ENST00000619485 RHOXF1Q8NHV9 184 aa10.03□□□□□ -0.8
TP53-225ENST00000619485 PHF10Q8WUB8 498 aaKnown RBP10.03□□□□□ -0.8
TP53-225ENST00000619485 APIPQ96GX9 242 aa10.03□□□□□ -0.8
TP53-225ENST00000619485 PSD2Q9BQI7 771 aa10.03□□□□□ -0.8
TP53-225ENST00000619485 COPS4Q9BT78 406 aa10.03□□□□□ -0.8
TP53-225ENST00000619485 TTLL2Q9BWV7 592 aa10.03□□□□□ -0.8
TP53-225ENST00000619485 RETREG1Q9H6L5 497 aa10.03□□□□□ -0.8
TP53-225ENST00000619485 MARCH7Q9H992 704 aa10.03□□□□□ -0.8
TP53-225ENST00000619485 SIRT5Q9NXA8 310 aa10.03□□□□□ -0.8
TP53-225ENST00000619485 ANKMY1Q9P2S6 941 aa10.03□□□□□ -0.8
TP53-225ENST00000619485 CCL26Q9Y258 94 aa10.03□□□□□ -0.8
TP53-225ENST00000619485 NOTCH4Q99466 2003 aa10.02□□□□□ -0.8
TP53-225ENST00000619485 M0R129 80 aa10.02□□□□□ -0.8
TP53-225ENST00000619485 CLIC1O00299 241 aa10.02□□□□□ -0.8
TP53-225ENST00000619485 ABLIM3O94929 683 aa10.02□□□□□ -0.8
TP53-225ENST00000619485 WDR47O94967 919 aa10.02□□□□□ -0.8
TP53-225ENST00000619485 F11P03951 625 aa10.02□□□□□ -0.8
TP53-225ENST00000619485 DNTTP04053 509 aa10.02□□□□□ -0.8
TP53-225ENST00000619485 SDC1P18827 310 aa10.02□□□□□ -0.8
TP53-225ENST00000619485 ITGALP20701 1170 aa10.02□□□□□ -0.8
TP53-225ENST00000619485 GADD45AP24522 165 aa10.02□□□□□ -0.8
TP53-225ENST00000619485 HOXA9P31269 272 aa10.02□□□□□ -0.8
TP53-225ENST00000619485 GRK3P35626 688 aa10.02□□□□□ -0.8
TP53-225ENST00000619485 CCR2P41597 374 aa10.02□□□□□ -0.8
TP53-225ENST00000619485 KIR3DL1P43629 444 aa10.02□□□□□ -0.8
TP53-225ENST00000619485 RPIAP49247 311 aa10.02□□□□□ -0.8
TP53-225ENST00000619485 PPP5CP53041 499 aa10.02□□□□□ -0.8
TP53-225ENST00000619485 WDR5P61964 334 aaKnown RBP10.02□□□□□ -0.8
TP53-225ENST00000619485 HSPA14Q0VDF9 509 aa10.02□□□□□ -0.8
TP53-225ENST00000619485 CAMK2GQ13555 558 aaPredicted RBP10.02□□□□□ -0.8
TP53-225ENST00000619485 PLEKHG6Q3KR16 790 aa10.02□□□□□ -0.8
TP53-225ENST00000619485 ZNF404Q494X3 552 aa10.02□□□□□ -0.8
TP53-225ENST00000619485 CRTC2Q53ET0 693 aaPredicted RBP10.02□□□□□ -0.8
TP53-225ENST00000619485 LRRC73Q5JTD7 316 aa10.02□□□□□ -0.8
TP53-225ENST00000619485 GAREM2Q75VX8 874 aa10.02□□□□□ -0.8
TP53-225ENST00000619485 TRIM46Q7Z4K8 759 aa10.02□□□□□ -0.8
TP53-225ENST00000619485 CALHM3Q86XJ0 350 aa10.02□□□□□ -0.8
TP53-225ENST00000619485 LYSMD2Q8IV50 215 aa10.02□□□□□ -0.8
TP53-225ENST00000619485 CLECL1Q8IZS7 167 aa10.02□□□□□ -0.8
TP53-225ENST00000619485 APCDD1Q8J025 514 aa10.02□□□□□ -0.8
TP53-225ENST00000619485 DEPDC4Q8N2C3 294 aa10.02□□□□□ -0.8
TP53-225ENST00000619485 DNASE1L2Q92874 299 aa10.02□□□□□ -0.8
TP53-225ENST00000619485 MAL2Q969L2 176 aa10.02□□□□□ -0.8
TP53-225ENST00000619485 CENPOQ9BU64 300 aa10.02□□□□□ -0.8
TP53-225ENST00000619485 ITPAQ9BY32 194 aa10.02□□□□□ -0.8
TP53-225ENST00000619485 REXO4Q9GZR2 422 aaKnown RBP10.02□□□□□ -0.8
TP53-225ENST00000619485 ZFYVE1Q9HBF4 777 aa10.02□□□□□ -0.8
TP53-225ENST00000619485 TM9SF3Q9HD45 589 aa10.02□□□□□ -0.8
TP53-225ENST00000619485 PCDHGB1Q9Y5G3 927 aa10.02□□□□□ -0.8
TP53-225ENST00000619485 LTBP2Q14767 1821 aa10.02□□□□□ -0.81
TP53-225ENST00000619485 TRBV5-3A0A0A0MS03 114 aa10.02□□□□□ -0.81
TP53-225ENST00000619485 PABPN1LA6NDY0 278 aaKnown RBP10.02□□□□□ -0.81
TP53-225ENST00000619485 PRRG1O14668 218 aa10.02□□□□□ -0.81
TP53-225ENST00000619485 UPK1BO75841 260 aa10.02□□□□□ -0.81
TP53-225ENST00000619485 TPPPO94811 219 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms