RNA–Protein interactions for RNA: ENST00000618081.4

CCDC144B-208, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene CCDC144B, Length 8,688 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-208ENST00000618081 MTPNP58546 118 aa10.88□□□□□ -0.67
CCDC144B-208ENST00000618081 C3orf33Q6P1S2 294 aa10.88□□□□□ -0.67
CCDC144B-208ENST00000618081 PYROXD2Q8N2H3 581 aa10.88□□□□□ -0.67
CCDC144B-208ENST00000618081 FTMTQ8N4E7 242 aa10.88□□□□□ -0.67
CCDC144B-208ENST00000618081 LPIN3Q9BQK8 851 aa10.88□□□□□ -0.67
CCDC144B-208ENST00000618081 SLC22A4Q9H015 551 aa10.88□□□□□ -0.67
CCDC144B-208ENST00000618081 IGSF9Q9P2J2 1179 aa10.88□□□□□ -0.67
CCDC144B-208ENST00000618081 NUP50Q9UKX7 468 aa10.88□□□□□ -0.67
CCDC144B-208ENST00000618081 FZD4Q9ULV1 537 aa10.88□□□□□ -0.67
CCDC144B-208ENST00000618081 PCDHGB6Q9Y5F9 930 aa10.88□□□□□ -0.67
CCDC144B-208ENST00000618081 TTC3P53804 2025 aa10.88□□□□□ -0.67
CCDC144B-208ENST00000618081 GPR25O00155 361 aa10.88□□□□□ -0.67
CCDC144B-208ENST00000618081 CHRNA1P02708 482 aa10.88□□□□□ -0.67
CCDC144B-208ENST00000618081 HOXB2P14652 356 aa10.88□□□□□ -0.67
CCDC144B-208ENST00000618081 FOXK1P85037 733 aa10.88□□□□□ -0.67
CCDC144B-208ENST00000618081 SEMA3AQ14563 771 aa10.88□□□□□ -0.67
CCDC144B-208ENST00000618081 TIGD4Q8IY51 512 aa10.88□□□□□ -0.67
CCDC144B-208ENST00000618081 Q8N9G6 341 aaPredicted RBP10.88□□□□□ -0.67
CCDC144B-208ENST00000618081 NEDD4LQ96PU5 975 aa10.88□□□□□ -0.67
CCDC144B-208ENST00000618081 CD320Q9NPF0 282 aa10.88□□□□□ -0.67
CCDC144B-208ENST00000618081 FNIP2Q9P278 1114 aa10.88□□□□□ -0.67
CCDC144B-208ENST00000618081 MROH1Q8NDA8 1641 aa10.88□□□□□ -0.67
CCDC144B-208ENST00000618081 SCAMP1O15126 338 aa10.87□□□□□ -0.67
CCDC144B-208ENST00000618081 NOBOXO60393 691 aa10.87□□□□□ -0.67
CCDC144B-208ENST00000618081 EPCAMP16422 314 aa10.87□□□□□ -0.67
CCDC144B-208ENST00000618081 AZGP1P25311 298 aaKnown RBP10.87□□□□□ -0.67
CCDC144B-208ENST00000618081 PRKCZQ05513 592 aa10.87□□□□□ -0.67
CCDC144B-208ENST00000618081 ALG10BQ5I7T1 473 aa10.87□□□□□ -0.67
CCDC144B-208ENST00000618081 FRG2Q64ET8 278 aa10.87□□□□□ -0.67
CCDC144B-208ENST00000618081 FRG2BQ96QU4 278 aa10.87□□□□□ -0.67
CCDC144B-208ENST00000618081 ZNF350Q9GZX5 532 aa10.87□□□□□ -0.67
CCDC144B-208ENST00000618081 ACTL8Q9H568 366 aa10.87□□□□□ -0.67
CCDC144B-208ENST00000618081 MOV10Q9HCE1 1003 aaKnown RBP10.87□□□□□ -0.67
CCDC144B-208ENST00000618081 B4GALT7Q9UBV7 327 aa10.87□□□□□ -0.67
CCDC144B-208ENST00000618081 BCL9LQ86UU0 1499 aa10.87□□□□□ -0.67
CCDC144B-208ENST00000618081 A0A1W2PRQ8 180 aa10.87□□□□□ -0.67
CCDC144B-208ENST00000618081 FARS2O95363 451 aaKnown RBP10.87□□□□□ -0.67
CCDC144B-208ENST00000618081 ITGB1P05556 798 aa10.87□□□□□ -0.67
CCDC144B-208ENST00000618081 HK1P19367 917 aa10.87□□□□□ -0.67
CCDC144B-208ENST00000618081 NPLQ9BXD5 320 aaPredicted RBP10.87□□□□□ -0.67
CCDC144B-208ENST00000618081 SLC5A7Q9GZV3 580 aa10.87□□□□□ -0.67
CCDC144B-208ENST00000618081 SNTG1Q9NSN8 517 aa10.87□□□□□ -0.67
CCDC144B-208ENST00000618081 COMMD3Q9UBI1 195 aa10.87□□□□□ -0.67
CCDC144B-208ENST00000618081 SEC14L4Q9UDX3 406 aa10.87□□□□□ -0.67
CCDC144B-208ENST00000618081 GNG8Q9UK08 70 aa10.87□□□□□ -0.67
CCDC144B-208ENST00000618081 RGPD1P0DJD0 1748 aa10.87□□□□□ -0.67
CCDC144B-208ENST00000618081 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.87□□□□□ -0.67
CCDC144B-208ENST00000618081 SH3D21A4FU49 640 aa10.87□□□□□ -0.67
CCDC144B-208ENST00000618081 UPK3BL1B0FP48 263 aa10.87□□□□□ -0.67
CCDC144B-208ENST00000618081 UPK3BL2E5RIL1 263 aa10.87□□□□□ -0.67
CCDC144B-208ENST00000618081 SLC22A1O15245 554 aa10.87□□□□□ -0.67
CCDC144B-208ENST00000618081 PFKLP17858 780 aa10.87□□□□□ -0.67
CCDC144B-208ENST00000618081 EFNA1P20827 205 aaPredicted RBP10.87□□□□□ -0.67
CCDC144B-208ENST00000618081 CDKN1CP49918 316 aaPredicted RBP10.87□□□□□ -0.67
CCDC144B-208ENST00000618081 JAM2P57087 298 aa10.87□□□□□ -0.67
CCDC144B-208ENST00000618081 KIAA1161Q6NSJ0 714 aa10.87□□□□□ -0.67
CCDC144B-208ENST00000618081 FAM86B1Q8N7N1 296 aa10.87□□□□□ -0.67
CCDC144B-208ENST00000618081 LMX1AQ8TE12 382 aa10.87□□□□□ -0.67
CCDC144B-208ENST00000618081 FEM1AQ9BSK4 669 aa10.87□□□□□ -0.67
CCDC144B-208ENST00000618081 KAT8Q9H7Z6 458 aaKnown RBP10.87□□□□□ -0.67
CCDC144B-208ENST00000618081 ACSS2Q9NR19 701 aa10.87□□□□□ -0.67
CCDC144B-208ENST00000618081 DNMT3AQ9Y6K1 912 aaPredicted RBP10.87□□□□□ -0.67
CCDC144B-208ENST00000618081 MATN2O00339 956 aa10.87□□□□□ -0.67
CCDC144B-208ENST00000618081 KDM4BO94953 1096 aa10.87□□□□□ -0.67
CCDC144B-208ENST00000618081 CYP11A1P05108 521 aa10.87□□□□□ -0.67
CCDC144B-208ENST00000618081 ZNF16P17020 682 aaPredicted RBP10.87□□□□□ -0.67
CCDC144B-208ENST00000618081 CA9Q16790 459 aa10.87□□□□□ -0.67
CCDC144B-208ENST00000618081 LRTOMTQ8WZ04 291 aa10.87□□□□□ -0.67
CCDC144B-208ENST00000618081 COL21A1Q96P44 957 aa10.87□□□□□ -0.67
CCDC144B-208ENST00000618081 HPF1Q9NWY4 346 aa10.87□□□□□ -0.67
CCDC144B-208ENST00000618081 ZNF142P52746 1687 aaPredicted RBP10.87□□□□□ -0.67
CCDC144B-208ENST00000618081 ALPIP09923 528 aa10.87□□□□□ -0.67
CCDC144B-208ENST00000618081 DPYSL2Q16555 572 aa10.87□□□□□ -0.67
CCDC144B-208ENST00000618081 ZC3HC1Q86WB0 502 aaKnown RBP10.87□□□□□ -0.67
CCDC144B-208ENST00000618081 MFSD2AQ8NA29 543 aa10.87□□□□□ -0.67
CCDC144B-208ENST00000618081 LENG8Q96PV6 779 aaPredicted RBP10.87□□□□□ -0.67
CCDC144B-208ENST00000618081 YIPF4Q9BSR8 244 aa10.87□□□□□ -0.67
CCDC144B-208ENST00000618081 OSBPL2Q9H1P3 480 aa10.87□□□□□ -0.67
CCDC144B-208ENST00000618081 PCDHAC2Q9Y5I4 1007 aa10.87□□□□□ -0.67
CCDC144B-208ENST00000618081 KNDC1Q76NI1 1749 aa10.87□□□□□ -0.67
CCDC144B-208ENST00000618081 A8MUI8 341 aa10.87□□□□□ -0.67
CCDC144B-208ENST00000618081 RNF13O43567 381 aa10.87□□□□□ -0.67
CCDC144B-208ENST00000618081 IRF2P14316 349 aa10.87□□□□□ -0.67
CCDC144B-208ENST00000618081 ECH1Q13011 328 aa10.87□□□□□ -0.67
CCDC144B-208ENST00000618081 FAM76BQ5HYJ3 339 aa10.87□□□□□ -0.67
CCDC144B-208ENST00000618081 VWA5B1Q5TIE3 1220 aa10.87□□□□□ -0.67
CCDC144B-208ENST00000618081 CEACAM20Q6UY09 585 aa10.87□□□□□ -0.67
CCDC144B-208ENST00000618081 NIPA2Q8N8Q9 360 aa10.87□□□□□ -0.67
CCDC144B-208ENST00000618081 OR5T2Q8NGG2 359 aa10.87□□□□□ -0.67
CCDC144B-208ENST00000618081 PHOSPHO1Q8TCT1 267 aa10.87□□□□□ -0.67
CCDC144B-208ENST00000618081 S100A16Q96FQ6 103 aaKnown RBP10.87□□□□□ -0.67
CCDC144B-208ENST00000618081 CLIC1O00299 241 aa10.87□□□□□ -0.67
CCDC144B-208ENST00000618081 IFNA7P01567 189 aa10.87□□□□□ -0.67
CCDC144B-208ENST00000618081 CDH1P12830 882 aa10.87□□□□□ -0.67
CCDC144B-208ENST00000618081 FASTKD3Q14CZ7 662 aaKnown RBP10.87□□□□□ -0.67
CCDC144B-208ENST00000618081 SYCE2Q6PIF2 218 aa10.87□□□□□ -0.67
CCDC144B-208ENST00000618081 BEND4Q6ZU67 534 aa10.87□□□□□ -0.67
CCDC144B-208ENST00000618081 FN3KQ9H479 309 aa10.87□□□□□ -0.67
CCDC144B-208ENST00000618081 ST6GALNAC4Q9H4F1 302 aa10.87□□□□□ -0.67
CCDC144B-208ENST00000618081 ANXA3P12429 323 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms