RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 DYRK1BQ9Y463 629 aa7.51□□□□□ -1.21
NEK3-207ENST00000617054 FAM149AA5PLN7 773 aa7.5□□□□□ -1.21
NEK3-207ENST00000617054 BBIP1A8MTZ0 92 aa7.5□□□□□ -1.21
NEK3-207ENST00000617054 CELA2BP08218 269 aaPredicted RBP7.5□□□□□ -1.21
NEK3-207ENST00000617054 C1GALT1C1LP0DN25 315 aa7.5□□□□□ -1.21
NEK3-207ENST00000617054 JAK1P23458 1154 aa7.5□□□□□ -1.21
NEK3-207ENST00000617054 OXTRP30559 389 aa7.5□□□□□ -1.21
NEK3-207ENST00000617054 VHLP40337 213 aa7.5□□□□□ -1.21
NEK3-207ENST00000617054 GCGRP47871 477 aa7.5□□□□□ -1.21
NEK3-207ENST00000617054 CTBSQ01459 385 aa7.5□□□□□ -1.21
NEK3-207ENST00000617054 ACSM2AQ08AH3 577 aa7.5□□□□□ -1.21
NEK3-207ENST00000617054 SMAD4Q13485 552 aaKnown RBP7.5□□□□□ -1.21
NEK3-207ENST00000617054 SAMD4BQ5PRF9 694 aaKnown RBP7.5□□□□□ -1.21
NEK3-207ENST00000617054 ACSM2BQ68CK6 577 aa7.5□□□□□ -1.21
NEK3-207ENST00000617054 GRHL2Q6ISB3 625 aa7.5□□□□□ -1.21
NEK3-207ENST00000617054 MED27Q6P2C8 311 aa7.5□□□□□ -1.21
NEK3-207ENST00000617054 NXPE4Q6UWF7 544 aa7.5□□□□□ -1.21
NEK3-207ENST00000617054 IZUMO2Q6UXV1 221 aa7.5□□□□□ -1.21
NEK3-207ENST00000617054 DCUN1D3Q8IWE4 304 aa7.5□□□□□ -1.21
NEK3-207ENST00000617054 CLECL1Q8IZS7 167 aa7.5□□□□□ -1.21
NEK3-207ENST00000617054 OR4E2Q8NGC2 313 aa7.5□□□□□ -1.21
NEK3-207ENST00000617054 OR10A6Q8NH74 314 aa7.5□□□□□ -1.21
NEK3-207ENST00000617054 LRTOMTQ8WZ04 291 aa7.5□□□□□ -1.21
NEK3-207ENST00000617054 SLCO4A1Q96BD0 722 aa7.5□□□□□ -1.21
NEK3-207ENST00000617054 HOPXQ9BPY8 73 aaPredicted RBP7.5□□□□□ -1.21
NEK3-207ENST00000617054 SGPP1Q9BX95 441 aa7.5□□□□□ -1.21
NEK3-207ENST00000617054 CLMPQ9H6B4 373 aa7.5□□□□□ -1.21
NEK3-207ENST00000617054 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.5□□□□□ -1.21
NEK3-207ENST00000617054 MMP17Q9ULZ9 603 aa7.5□□□□□ -1.21
NEK3-207ENST00000617054 SLC17A4Q9Y2C5 497 aa7.5□□□□□ -1.21
NEK3-207ENST00000617054 NEUROG3Q9Y4Z2 214 aa7.5□□□□□ -1.21
NEK3-207ENST00000617054 PCDHB14Q9Y5E9 798 aa7.5□□□□□ -1.21
NEK3-207ENST00000617054 PLXND1Q9Y4D7 1925 aa7.5□□□□□ -1.21
NEK3-207ENST00000617054 SCN3AQ9NY46 2000 aa7.5□□□□□ -1.21
NEK3-207ENST00000617054 LCMT2O60294 686 aaKnown RBP7.5□□□□□ -1.21
NEK3-207ENST00000617054 FKBP6O75344 327 aa7.5□□□□□ -1.21
NEK3-207ENST00000617054 TIPRLO75663 272 aa7.5□□□□□ -1.21
NEK3-207ENST00000617054 ABCB1P08183 1280 aaPredicted RBP7.5□□□□□ -1.21
NEK3-207ENST00000617054 ANXA4P09525 319 aaPredicted RBP7.5□□□□□ -1.21
NEK3-207ENST00000617054 KELP23276 732 aa7.5□□□□□ -1.21
NEK3-207ENST00000617054 SLC14A1Q13336 389 aa7.5□□□□□ -1.21
NEK3-207ENST00000617054 TDGQ13569 410 aa7.5□□□□□ -1.21
NEK3-207ENST00000617054 EOGTQ5NDL2 527 aa7.5□□□□□ -1.21
NEK3-207ENST00000617054 WLSQ5T9L3 541 aa7.5□□□□□ -1.21
NEK3-207ENST00000617054 CAPRIN2Q6IMN6 1127 aaKnown RBP7.5□□□□□ -1.21
NEK3-207ENST00000617054 PTCRAQ6ISU1 281 aaPredicted RBP7.5□□□□□ -1.21
NEK3-207ENST00000617054 Q6ZSR6 202 aa7.5□□□□□ -1.21
NEK3-207ENST00000617054 ARMCX6Q7L4S7 300 aa7.5□□□□□ -1.21
NEK3-207ENST00000617054 DHFR2Q86XF0 187 aa7.5□□□□□ -1.21
NEK3-207ENST00000617054 ZNF761Q86XN6 746 aaPredicted RBP7.5□□□□□ -1.21
NEK3-207ENST00000617054 MSRB3Q8IXL7 192 aa7.5□□□□□ -1.21
NEK3-207ENST00000617054 ANKRD53Q8N9V6 530 aa7.5□□□□□ -1.21
NEK3-207ENST00000617054 OR13H1Q8NG92 308 aa7.5□□□□□ -1.21
NEK3-207ENST00000617054 ZDHHC16Q969W1 377 aa7.5□□□□□ -1.21
NEK3-207ENST00000617054 CMTM7Q96FZ5 175 aa7.5□□□□□ -1.21
NEK3-207ENST00000617054 FCRL4Q96PJ5 515 aa7.5□□□□□ -1.21
NEK3-207ENST00000617054 ZBTB18Q99592 522 aa7.5□□□□□ -1.21
NEK3-207ENST00000617054 KLHL25Q9H0H3 589 aa7.5□□□□□ -1.21
NEK3-207ENST00000617054 TRIT1Q9H3H1 467 aaKnown RBP7.5□□□□□ -1.21
NEK3-207ENST00000617054 SPATA6Q9NWH7 488 aaPredicted RBP7.5□□□□□ -1.21
NEK3-207ENST00000617054 SPHK1Q9NYA1 384 aa7.5□□□□□ -1.21
NEK3-207ENST00000617054 KLF15Q9UIH9 416 aa7.5□□□□□ -1.21
NEK3-207ENST00000617054 PCDHGA11Q9Y5H2 935 aa7.5□□□□□ -1.21
NEK3-207ENST00000617054 A0A1W2PPV9 198 aa7.49□□□□□ -1.21
NEK3-207ENST00000617054 KRBA1A5PL33 1030 aa7.49□□□□□ -1.21
NEK3-207ENST00000617054 WASHC1A8K0Z3 465 aa7.49□□□□□ -1.21
NEK3-207ENST00000617054 H0YIV9 168 aa7.49□□□□□ -1.21
NEK3-207ENST00000617054 FPGTO14772 594 aa7.49□□□□□ -1.21
NEK3-207ENST00000617054 CPSF4O95639 269 aaKnown RBP7.49□□□□□ -1.21
NEK3-207ENST00000617054 SEMA4FO95754 770 aa7.49□□□□□ -1.21
NEK3-207ENST00000617054 KLK1P06870 262 aa7.49□□□□□ -1.21
NEK3-207ENST00000617054 CHRNB1P11230 501 aa7.49□□□□□ -1.21
NEK3-207ENST00000617054 LAMP1P11279 417 aa7.49□□□□□ -1.21
NEK3-207ENST00000617054 ACTR1BP42025 376 aa7.49□□□□□ -1.21
NEK3-207ENST00000617054 ACTR1AP61163 376 aa7.49□□□□□ -1.21
NEK3-207ENST00000617054 C1orf61Q13536 156 aa7.49□□□□□ -1.21
NEK3-207ENST00000617054 AGERQ15109 404 aa7.49□□□□□ -1.21
NEK3-207ENST00000617054 GRAMD1BQ3KR37 738 aa7.49□□□□□ -1.21
NEK3-207ENST00000617054 SFT2D3Q587I9 215 aa7.49□□□□□ -1.21
NEK3-207ENST00000617054 SWT1Q5T5J6 900 aaKnown RBP7.49□□□□□ -1.21
NEK3-207ENST00000617054 WASH2PQ6VEQ5 465 aa7.49□□□□□ -1.21
NEK3-207ENST00000617054 GCNT7Q6ZNI0 430 aa7.49□□□□□ -1.21
NEK3-207ENST00000617054 DGLUCYQ7Z3D6 616 aa7.49□□□□□ -1.21
NEK3-207ENST00000617054 VN1R5Q7Z5H4 357 aa7.49□□□□□ -1.21
NEK3-207ENST00000617054 GALNT4Q8N4A0 578 aa7.49□□□□□ -1.21
NEK3-207ENST00000617054 OXR1Q8N573 874 aa7.49□□□□□ -1.21
NEK3-207ENST00000617054 TMEM145Q8NBT3 493 aa7.49□□□□□ -1.21
NEK3-207ENST00000617054 OR4K1Q8NGD4 311 aa7.49□□□□□ -1.21
NEK3-207ENST00000617054 OR52E1Q8NGJ3 308 aa7.49□□□□□ -1.21
NEK3-207ENST00000617054 DNAJC9Q8WXX5 260 aa7.49□□□□□ -1.21
NEK3-207ENST00000617054 BIRC7Q96CA5 298 aa7.49□□□□□ -1.21
NEK3-207ENST00000617054 CAMK1GQ96NX5 476 aa7.49□□□□□ -1.21
NEK3-207ENST00000617054 SEPHS2Q99611 448 aa7.49□□□□□ -1.21
NEK3-207ENST00000617054 CGREF1Q99674 301 aa7.49□□□□□ -1.21
NEK3-207ENST00000617054 KCTD14Q9BQ13 255 aaPredicted RBP7.49□□□□□ -1.21
NEK3-207ENST00000617054 ABCD2Q9UBJ2 740 aa7.49□□□□□ -1.21
NEK3-207ENST00000617054 ANGPTL2Q9UKU9 493 aa7.49□□□□□ -1.21
NEK3-207ENST00000617054 SNX13Q9Y5W8 968 aa7.49□□□□□ -1.21
NEK3-207ENST00000617054 CELSR3Q9NYQ7 3312 aa7.49□□□□□ -1.21
NEK3-207ENST00000617054 hCG_2014768A0A024R1R8 64 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms