RNA–Protein interactions for RNA: ENST00000616325.1

PCDHA11-202, Transcript of protocadherin alpha 11, humanhuman

APPRIS ALT2 BASIC

Gene PCDHA11, Length 3,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-202ENST00000616325 CKMT1AP12532 417 aa13□□□□□ -0.33
PCDHA11-202ENST00000616325 DDOSTP39656 456 aa13□□□□□ -0.33
PCDHA11-202ENST00000616325 SLC9A3P48764 834 aa13□□□□□ -0.33
PCDHA11-202ENST00000616325 CYP4F8P98187 520 aa13□□□□□ -0.33
PCDHA11-202ENST00000616325 HOXC5Q00444 222 aa13□□□□□ -0.33
PCDHA11-202ENST00000616325 GTF2H2Q13888 395 aa13□□□□□ -0.33
PCDHA11-202ENST00000616325 SPATS1Q496A3 300 aa13□□□□□ -0.33
PCDHA11-202ENST00000616325 CYP27C1Q4G0S4 372 aa13□□□□□ -0.33
PCDHA11-202ENST00000616325 GTF2H2CQ6P1K8 395 aa13□□□□□ -0.33
PCDHA11-202ENST00000616325 CCDC71Q8IV32 467 aaPredicted RBP13□□□□□ -0.33
PCDHA11-202ENST00000616325 ENTHD1Q8IYW4 607 aa13□□□□□ -0.33
PCDHA11-202ENST00000616325 UMODL1-AS1Q8N2C9 162 aa13□□□□□ -0.33
PCDHA11-202ENST00000616325 SPPL2AQ8TCT8 520 aa13□□□□□ -0.33
PCDHA11-202ENST00000616325 ISG20Q96AZ6 181 aaKnown RBP13□□□□□ -0.33
PCDHA11-202ENST00000616325 DACT3Q96B18 629 aaPredicted RBP13□□□□□ -0.33
PCDHA11-202ENST00000616325 PPP1R2P1Q96PQ5 205 aa13□□□□□ -0.33
PCDHA11-202ENST00000616325 INPP5KQ9BT40 448 aa13□□□□□ -0.33
PCDHA11-202ENST00000616325 TRIM62Q9BVG3 475 aa13□□□□□ -0.33
PCDHA11-202ENST00000616325 ACAT2Q9BWD1 397 aa13□□□□□ -0.33
PCDHA11-202ENST00000616325 TANC1Q9C0D5 1861 aa13□□□□□ -0.33
PCDHA11-202ENST00000616325 PRAMEF12O95522 483 aa13□□□□□ -0.33
PCDHA11-202ENST00000616325 RPL17P18621 184 aaKnown RBP13□□□□□ -0.33
PCDHA11-202ENST00000616325 RGS6P49758 472 aa13□□□□□ -0.33
PCDHA11-202ENST00000616325 TUSC3Q13454 348 aa13□□□□□ -0.33
PCDHA11-202ENST00000616325 CAMK2GQ13555 558 aaPredicted RBP13□□□□□ -0.33
PCDHA11-202ENST00000616325 GPR50Q13585 617 aa13□□□□□ -0.33
PCDHA11-202ENST00000616325 ZNF621Q6ZSS3 439 aa13□□□□□ -0.33
PCDHA11-202ENST00000616325 AADATQ8N5Z0 425 aa13□□□□□ -0.33
PCDHA11-202ENST00000616325 DIRAS2Q96HU8 199 aa13□□□□□ -0.33
PCDHA11-202ENST00000616325 ARNT2Q9HBZ2 717 aa13□□□□□ -0.33
PCDHA11-202ENST00000616325 DUSP12Q9UNI6 340 aa13□□□□□ -0.33
PCDHA11-202ENST00000616325 POLHQ9Y253 713 aa13□□□□□ -0.33
PCDHA11-202ENST00000616325 RAI2Q9Y5P3 530 aa13□□□□□ -0.33
PCDHA11-202ENST00000616325 H3BUI4 141 aa13□□□□□ -0.33
PCDHA11-202ENST00000616325 BTN3A3O00478 584 aa13□□□□□ -0.33
PCDHA11-202ENST00000616325 E2F3O00716 465 aa13□□□□□ -0.33
PCDHA11-202ENST00000616325 CAPN5O15484 640 aaPredicted RBP13□□□□□ -0.33
PCDHA11-202ENST00000616325 GLUD1P00367 558 aa13□□□□□ -0.33
PCDHA11-202ENST00000616325 IGLV3-25P01717 112 aa13□□□□□ -0.33
PCDHA11-202ENST00000616325 TNFRSF1BP20333 461 aa13□□□□□ -0.33
PCDHA11-202ENST00000616325 RFX2P48378 723 aa13□□□□□ -0.33
PCDHA11-202ENST00000616325 VLDLRP98155 873 aa13□□□□□ -0.33
PCDHA11-202ENST00000616325 PURAQ00577 322 aaKnown RBP13□□□□□ -0.33
PCDHA11-202ENST00000616325 SETMARQ53H47 684 aaPredicted RBP13□□□□□ -0.33
PCDHA11-202ENST00000616325 PLET1Q6UQ28 207 aa13□□□□□ -0.33
PCDHA11-202ENST00000616325 TSPYL5Q86VY4 417 aaPredicted RBP13□□□□□ -0.33
PCDHA11-202ENST00000616325 FRMD6Q96NE9 622 aa13□□□□□ -0.33
PCDHA11-202ENST00000616325 PTPN18Q99952 460 aa13□□□□□ -0.33
PCDHA11-202ENST00000616325 BRINP2Q9C0B6 783 aa13□□□□□ -0.33
PCDHA11-202ENST00000616325 DERL2Q9GZP9 239 aa13□□□□□ -0.33
PCDHA11-202ENST00000616325 THUMPD1Q9NXG2 353 aaKnown RBP13□□□□□ -0.33
PCDHA11-202ENST00000616325 ZNF224Q9NZL3 707 aa13□□□□□ -0.33
PCDHA11-202ENST00000616325 RPS17P08708 135 aaKnown RBP12.99□□□□□ -0.33
PCDHA11-202ENST00000616325 TSPAN19P0C672 248 aa12.99□□□□□ -0.33
PCDHA11-202ENST00000616325 JUNDP17535 347 aa12.99□□□□□ -0.33
PCDHA11-202ENST00000616325 TIE1P35590 1138 aa12.99□□□□□ -0.33
PCDHA11-202ENST00000616325 MLLT3P42568 568 aaPredicted RBP12.99□□□□□ -0.33
PCDHA11-202ENST00000616325 ZNF33AQ06730 810 aa12.99□□□□□ -0.33
PCDHA11-202ENST00000616325 QPRTQ15274 297 aa12.99□□□□□ -0.33
PCDHA11-202ENST00000616325 TAF12Q16514 161 aa12.99□□□□□ -0.33
PCDHA11-202ENST00000616325 YIF1BQ5BJH7 314 aa12.99□□□□□ -0.33
PCDHA11-202ENST00000616325 SHQ1Q6PI26 577 aaKnown RBP12.99□□□□□ -0.33
PCDHA11-202ENST00000616325 AFTPHQ6ULP2 937 aa12.99□□□□□ -0.33
PCDHA11-202ENST00000616325 NKAPQ8N5F7 415 aaKnown RBP12.99□□□□□ -0.33
PCDHA11-202ENST00000616325 WDR36Q8NI36 951 aaKnown RBP12.99□□□□□ -0.33
PCDHA11-202ENST00000616325 GGHQ92820 318 aa12.99□□□□□ -0.33
PCDHA11-202ENST00000616325 SDHCQ99643 169 aaPredicted RBP12.99□□□□□ -0.33
PCDHA11-202ENST00000616325 ASPNQ9BXN1 380 aa12.99□□□□□ -0.33
PCDHA11-202ENST00000616325 SIRT5Q9NXA8 310 aa12.99□□□□□ -0.33
PCDHA11-202ENST00000616325 FCF1Q9Y324 198 aaKnown RBP12.99□□□□□ -0.33
PCDHA11-202ENST00000616325 PCDHB5Q9Y5E4 795 aa12.99□□□□□ -0.33
PCDHA11-202ENST00000616325 WWP2O00308 870 aa12.99□□□□□ -0.33
PCDHA11-202ENST00000616325 GFRA2O00451 464 aa12.99□□□□□ -0.33
PCDHA11-202ENST00000616325 ARHGAP33O14559 1287 aa12.99□□□□□ -0.33
PCDHA11-202ENST00000616325 POLR1CO15160 346 aaPredicted RBP12.99□□□□□ -0.33
PCDHA11-202ENST00000616325 ZNF780AO75290 641 aaPredicted RBP12.99□□□□□ -0.33
PCDHA11-202ENST00000616325 ULK1O75385 1050 aa12.99□□□□□ -0.33
PCDHA11-202ENST00000616325 CYP2A6P11509 494 aaPredicted RBP12.99□□□□□ -0.33
PCDHA11-202ENST00000616325 ITGA2P17301 1181 aa12.99□□□□□ -0.33
PCDHA11-202ENST00000616325 LPOP22079 712 aaPredicted RBP12.99□□□□□ -0.33
PCDHA11-202ENST00000616325 INPP1P49441 399 aa12.99□□□□□ -0.33
PCDHA11-202ENST00000616325 SCN1BQ07699 218 aa12.99□□□□□ -0.33
PCDHA11-202ENST00000616325 MRPL28Q13084 256 aaKnown RBP12.99□□□□□ -0.33
PCDHA11-202ENST00000616325 FADDQ13158 208 aa12.99□□□□□ -0.33
PCDHA11-202ENST00000616325 ARHGEF6Q15052 776 aa12.99□□□□□ -0.33
PCDHA11-202ENST00000616325 SLC46A3Q7Z3Q1 461 aa12.99□□□□□ -0.33
PCDHA11-202ENST00000616325 RHEBL1Q8TAI7 183 aa12.99□□□□□ -0.33
PCDHA11-202ENST00000616325 CD200R1Q8TD46 325 aa12.99□□□□□ -0.33
PCDHA11-202ENST00000616325 ANKHQ9HCJ1 492 aa12.99□□□□□ -0.33
PCDHA11-202ENST00000616325 IL1RAPQ9NPH3 570 aa12.99□□□□□ -0.33
PCDHA11-202ENST00000616325 SNX7Q9UNH6 387 aa12.99□□□□□ -0.33
PCDHA11-202ENST00000616325 NINQ8N4C6 2090 aa12.99□□□□□ -0.33
PCDHA11-202ENST00000616325 MYO10Q9HD67 2058 aa12.99□□□□□ -0.33
PCDHA11-202ENST00000616325 LOC285095A0A1B0GVY8 99 aa12.98□□□□□ -0.33
PCDHA11-202ENST00000616325 TNFRSF10BO14763 440 aa12.98□□□□□ -0.33
PCDHA11-202ENST00000616325 TACR2P21452 398 aa12.98□□□□□ -0.33
PCDHA11-202ENST00000616325 RPL9P32969 192 aaKnown RBP12.98□□□□□ -0.33
PCDHA11-202ENST00000616325 NFKB2Q00653 900 aa12.98□□□□□ -0.33
PCDHA11-202ENST00000616325 SPDYE7PQ495Y7 208 aa12.98□□□□□ -0.33
PCDHA11-202ENST00000616325 LSMEM1Q8N8F7 131 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms