RNA–Protein interactions for RNA: ENST00000616247.4

LMO3-235, Transcript of LIM domain only 3, humanhuman

TSL 5 BASIC

Gene LMO3, Length 3,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-235ENST00000616247 SYT12Q8IV01 421 aa6.47□□□□□ -1.37
LMO3-235ENST00000616247 B3GNT7Q8NFL0 401 aa6.47□□□□□ -1.37
LMO3-235ENST00000616247 OR7D4Q8NG98 312 aa6.47□□□□□ -1.37
LMO3-235ENST00000616247 OR9Q2Q8NGE9 314 aa6.47□□□□□ -1.37
LMO3-235ENST00000616247 CHAC2Q8WUX2 184 aa6.47□□□□□ -1.37
LMO3-235ENST00000616247 ASB15Q8WXK1 588 aa6.47□□□□□ -1.37
LMO3-235ENST00000616247 C1GALT1C1Q96EU7 318 aa6.47□□□□□ -1.37
LMO3-235ENST00000616247 COPS8Q99627 209 aa6.47□□□□□ -1.37
LMO3-235ENST00000616247 POLR2J2Q9GZM3 115 aaKnown RBP6.47□□□□□ -1.37
LMO3-235ENST00000616247 HDHD2Q9H0R4 259 aa6.47□□□□□ -1.37
LMO3-235ENST00000616247 C11orf54Q9H0W9 315 aaPredicted RBP6.47□□□□□ -1.37
LMO3-235ENST00000616247 FAM124BQ9H5Z6 455 aaPredicted RBP6.47□□□□□ -1.37
LMO3-235ENST00000616247 NMUR1Q9HB89 426 aa6.47□□□□□ -1.37
LMO3-235ENST00000616247 DNAJC27Q9NZQ0 273 aa6.47□□□□□ -1.37
LMO3-235ENST00000616247 TMPRSS11EQ9UL52 423 aa6.47□□□□□ -1.37
LMO3-235ENST00000616247 NDRG4Q9ULP0 352 aaKnown RBP6.47□□□□□ -1.37
LMO3-235ENST00000616247 COL2A1P02458 1487 aaPredicted RBP6.47□□□□□ -1.37
LMO3-235ENST00000616247 FER1L6Q2WGJ9 1857 aa6.47□□□□□ -1.37
LMO3-235ENST00000616247 A0A0X1KG70 313 aa6.47□□□□□ -1.37
LMO3-235ENST00000616247 MROH6A6NGR9 719 aa6.47□□□□□ -1.37
LMO3-235ENST00000616247 NT5C1B-RDH14C9J2C7 533 aa6.47□□□□□ -1.37
LMO3-235ENST00000616247 CBX4O00257 560 aa6.47□□□□□ -1.37
LMO3-235ENST00000616247 ARHGAP33O14559 1287 aa6.47□□□□□ -1.37
LMO3-235ENST00000616247 MUSKO15146 869 aa6.47□□□□□ -1.37
LMO3-235ENST00000616247 CACNG3O60359 315 aa6.47□□□□□ -1.37
LMO3-235ENST00000616247 SERPINI2O75830 405 aa6.47□□□□□ -1.37
LMO3-235ENST00000616247 SOX14O95416 240 aa6.47□□□□□ -1.37
LMO3-235ENST00000616247 THP07101 528 aa6.47□□□□□ -1.37
LMO3-235ENST00000616247 DARSP14868 501 aaKnown RBP6.47□□□□□ -1.37
LMO3-235ENST00000616247 EPB42P16452 691 aa6.47□□□□□ -1.37
LMO3-235ENST00000616247 UGT2B10P36537 528 aa6.47□□□□□ -1.37
LMO3-235ENST00000616247 RORCP51449 518 aa6.47□□□□□ -1.37
LMO3-235ENST00000616247 MLLT6P55198 1093 aaPredicted RBP6.47□□□□□ -1.37
LMO3-235ENST00000616247 SRP54P61011 504 aaKnown RBP6.47□□□□□ -1.37
LMO3-235ENST00000616247 ABHD18Q0P651 414 aa6.47□□□□□ -1.37
LMO3-235ENST00000616247 MAD2L1Q13257 205 aaPredicted RBP6.47□□□□□ -1.37
LMO3-235ENST00000616247 GPR50Q13585 617 aa6.47□□□□□ -1.37
LMO3-235ENST00000616247 WSCD2Q2TBF2 565 aa6.47□□□□□ -1.37
LMO3-235ENST00000616247 LIPKQ5VXJ0 399 aa6.47□□□□□ -1.37
LMO3-235ENST00000616247 AFTPHQ6ULP2 937 aa6.47□□□□□ -1.37
LMO3-235ENST00000616247 PLEKHM3Q6ZWE6 761 aa6.47□□□□□ -1.37
LMO3-235ENST00000616247 ZNF598Q86UK7 904 aaKnown RBP6.47□□□□□ -1.37
LMO3-235ENST00000616247 GRAMD2AQ8IUY3 354 aa6.47□□□□□ -1.37
LMO3-235ENST00000616247 PHC2Q8IXK0 858 aa6.47□□□□□ -1.37
LMO3-235ENST00000616247 CLECL1Q8IZS7 167 aa6.47□□□□□ -1.37
LMO3-235ENST00000616247 LGI4Q8N135 537 aa6.47□□□□□ -1.37
LMO3-235ENST00000616247 DNAJC22Q8N4W6 341 aa6.47□□□□□ -1.37
LMO3-235ENST00000616247 ZNF566Q969W8 418 aa6.47□□□□□ -1.37
LMO3-235ENST00000616247 CINPQ9BW66 212 aaPredicted RBP6.47□□□□□ -1.37
LMO3-235ENST00000616247 CIPCQ9C0C6 399 aa6.47□□□□□ -1.37
LMO3-235ENST00000616247 TLR8Q9NR97 1041 aaKnown RBP6.47□□□□□ -1.37
LMO3-235ENST00000616247 PLSCR2Q9NRY7 297 aa6.47□□□□□ -1.37
LMO3-235ENST00000616247 ABCC13Q9NSE7 274 aa6.47□□□□□ -1.37
LMO3-235ENST00000616247 RLIMQ9NVW2 624 aa6.47□□□□□ -1.37
LMO3-235ENST00000616247 PSORS1C1Q9UIG5 152 aa6.47□□□□□ -1.37
LMO3-235ENST00000616247 COLQQ9Y215 455 aaPredicted RBP6.47□□□□□ -1.37
LMO3-235ENST00000616247 PCDHGA6Q9Y5G7 932 aa6.47□□□□□ -1.37
LMO3-235ENST00000616247 TNPO3Q9Y5L0 923 aaKnown RBP6.47□□□□□ -1.37
LMO3-235ENST00000616247 COL1A2P08123 1366 aa6.47□□□□□ -1.37
LMO3-235ENST00000616247 ZNF831Q5JPB2 1677 aa6.46□□□□□ -1.37
LMO3-235ENST00000616247 LOC105371267A0A1B0GV96 52 aa6.46□□□□□ -1.37
LMO3-235ENST00000616247 A0A1W2PQL4 384 aaPredicted RBP6.46□□□□□ -1.37
LMO3-235ENST00000616247 PLK4O00444 970 aa6.46□□□□□ -1.37
LMO3-235ENST00000616247 IFRD1O00458 451 aaPredicted RBP6.46□□□□□ -1.37
LMO3-235ENST00000616247 NUPL2O15504 423 aaKnown RBP6.46□□□□□ -1.37
LMO3-235ENST00000616247 CLEC2LP0C7M8 214 aa6.46□□□□□ -1.37
LMO3-235ENST00000616247 ATXN1LP0C7T5 689 aaKnown RBP6.46□□□□□ -1.37
LMO3-235ENST00000616247 CYP2A6P11509 494 aaPredicted RBP6.46□□□□□ -1.37
LMO3-235ENST00000616247 BMP1P13497 986 aa6.46□□□□□ -1.37
LMO3-235ENST00000616247 RFX2P48378 723 aa6.46□□□□□ -1.37
LMO3-235ENST00000616247 RPL34P49207 117 aaKnown RBP6.46□□□□□ -1.37
LMO3-235ENST00000616247 PRIM2P49643 509 aa6.46□□□□□ -1.37
LMO3-235ENST00000616247 RGS4P49798 205 aa6.46□□□□□ -1.37
LMO3-235ENST00000616247 VASPP50552 380 aaPredicted RBP6.46□□□□□ -1.37
LMO3-235ENST00000616247 FAPQ12884 760 aa6.46□□□□□ -1.37
LMO3-235ENST00000616247 MFSD10Q14728 455 aa6.46□□□□□ -1.37
LMO3-235ENST00000616247 VEPH1Q14D04 833 aa6.46□□□□□ -1.37
LMO3-235ENST00000616247 TBCEQ15813 527 aaPredicted RBP6.46□□□□□ -1.37
LMO3-235ENST00000616247 SNAPC1Q16533 368 aa6.46□□□□□ -1.37
LMO3-235ENST00000616247 TATDN3Q17R31 274 aa6.46□□□□□ -1.37
LMO3-235ENST00000616247 FLYWCH1Q4VC44 716 aa6.46□□□□□ -1.37
LMO3-235ENST00000616247 TIGD5Q53EQ6 642 aa6.46□□□□□ -1.37
LMO3-235ENST00000616247 RNASE12Q5GAN4 147 aaKnown RBP6.46□□□□□ -1.37
LMO3-235ENST00000616247 ZC3H12BQ5HYM0 836 aaKnown RBP6.46□□□□□ -1.37
LMO3-235ENST00000616247 PIK3R6Q5UE93 754 aa6.46□□□□□ -1.37
LMO3-235ENST00000616247 ATG9BQ674R7 924 aa6.46□□□□□ -1.37
LMO3-235ENST00000616247 FAM151BQ6UXP7 276 aa6.46□□□□□ -1.37
LMO3-235ENST00000616247 CHPFQ8IZ52 775 aa6.46□□□□□ -1.37
LMO3-235ENST00000616247 OR6C4Q8NGE1 309 aa6.46□□□□□ -1.37
LMO3-235ENST00000616247 OR6K2Q8NGY2 324 aa6.46□□□□□ -1.37
LMO3-235ENST00000616247 PIH1D2Q8WWB5 315 aa6.46□□□□□ -1.37
LMO3-235ENST00000616247 CCDC115Q96NT0 180 aa6.46□□□□□ -1.37
LMO3-235ENST00000616247 PPIL3Q9H2H8 161 aaKnown RBP6.46□□□□□ -1.37
LMO3-235ENST00000616247 RNF121Q9H920 327 aa6.46□□□□□ -1.37
LMO3-235ENST00000616247 MCUBQ9NWR8 336 aa6.46□□□□□ -1.37
LMO3-235ENST00000616247 SLC6A14Q9UN76 642 aa6.46□□□□□ -1.37
LMO3-235ENST00000616247 SSR3Q9UNL2 185 aa6.46□□□□□ -1.37
LMO3-235ENST00000616247 MYO10Q9HD67 2058 aa6.46□□□□□ -1.38
LMO3-235ENST00000616247 A0A0G2JMP0 313 aa6.46□□□□□ -1.38
LMO3-235ENST00000616247 SLC28A1O00337 649 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms