RNA–Protein interactions for RNA: ENST00000613073.4

CNOT3-208, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-208ENST00000613073 ADPRHL2Q9NX46 363 aa15.97■□□□□ 0.15
CNOT3-208ENST00000613073 IL36AQ9UHA7 158 aa15.97■□□□□ 0.15
CNOT3-208ENST00000613073 AGRPO00253 132 aa15.97■□□□□ 0.15
CNOT3-208ENST00000613073 STK16O75716 305 aa15.97■□□□□ 0.15
CNOT3-208ENST00000613073 CYP17A1P05093 508 aa15.97■□□□□ 0.15
CNOT3-208ENST00000613073 HNRNPA1P09651 372 aaKnown RBP eCLIP15.97■□□□□ 0.15
CNOT3-208ENST00000613073 SLC2A4P14672 509 aa15.97■□□□□ 0.15
CNOT3-208ENST00000613073 EPB42P16452 691 aa15.97■□□□□ 0.15
CNOT3-208ENST00000613073 PRKCAP17252 672 aa15.97■□□□□ 0.15
CNOT3-208ENST00000613073 PRKACGP22612 351 aa15.97■□□□□ 0.15
CNOT3-208ENST00000613073 AOAHP28039 575 aa15.97■□□□□ 0.15
CNOT3-208ENST00000613073 VIPR1P32241 457 aa15.97■□□□□ 0.15
CNOT3-208ENST00000613073 EIF2DP41214 584 aaKnown RBP15.97■□□□□ 0.15
CNOT3-208ENST00000613073 METAP1P53582 386 aa15.97■□□□□ 0.15
CNOT3-208ENST00000613073 AASDHQ4L235 1098 aaPredicted RBP15.97■□□□□ 0.15
CNOT3-208ENST00000613073 HERVK_113Q902F9 699 aa15.97■□□□□ 0.15
CNOT3-208ENST00000613073 HDAC2Q92769 488 aaKnown RBP15.97■□□□□ 0.15
CNOT3-208ENST00000613073 ULK4Q96C45 1275 aa15.97■□□□□ 0.15
CNOT3-208ENST00000613073 C6orf62Q9GZU0 229 aaPredicted RBP15.97■□□□□ 0.15
CNOT3-208ENST00000613073 CPNE5Q9HCH3 593 aa15.97■□□□□ 0.15
CNOT3-208ENST00000613073 INTS7Q9NVH2 962 aaKnown RBP15.97■□□□□ 0.15
CNOT3-208ENST00000613073 FAM118AQ9NWS6 357 aa15.97■□□□□ 0.15
CNOT3-208ENST00000613073 PRELID1Q9Y255 219 aa15.97■□□□□ 0.15
CNOT3-208ENST00000613073 PCDHA9Q9Y5H5 950 aa15.97■□□□□ 0.15
CNOT3-208ENST00000613073 CEP290O15078 2479 aa15.96■□□□□ 0.15
CNOT3-208ENST00000613073 IGLV3-16A0A075B6K0 115 aa15.96■□□□□ 0.15
CNOT3-208ENST00000613073 GABARAPO95166 117 aa15.96■□□□□ 0.15
CNOT3-208ENST00000613073 ANXA5P08758 320 aa15.96■□□□□ 0.15
CNOT3-208ENST00000613073 HOXA9P31269 272 aa15.96■□□□□ 0.15
CNOT3-208ENST00000613073 PPP5CP53041 499 aa15.96■□□□□ 0.15
CNOT3-208ENST00000613073 RPL38P63173 70 aaKnown RBP15.96■□□□□ 0.15
CNOT3-208ENST00000613073 GRIN2CQ14957 1233 aa15.96■□□□□ 0.15
CNOT3-208ENST00000613073 CPSF6Q16630 551 aaKnown RBP eCLIP15.96■□□□□ 0.15
CNOT3-208ENST00000613073 ZXDCQ2QGD7 858 aaPredicted RBP15.96■□□□□ 0.15
CNOT3-208ENST00000613073 FAM214AQ32MH5 1076 aa15.96■□□□□ 0.15
CNOT3-208ENST00000613073 LAIR2Q6ISS4 152 aa15.96■□□□□ 0.15
CNOT3-208ENST00000613073 RORBQ92753 470 aa15.96■□□□□ 0.15
CNOT3-208ENST00000613073 RHNO1Q9BSD3 238 aa15.96■□□□□ 0.15
CNOT3-208ENST00000613073 CENPOQ9BU64 300 aa15.96■□□□□ 0.15
CNOT3-208ENST00000613073 ZFP14Q9HCL3 533 aa15.96■□□□□ 0.15
CNOT3-208ENST00000613073 FBXO8Q9NRD0 319 aa15.96■□□□□ 0.15
CNOT3-208ENST00000613073 N6AMT1Q9Y5N5 214 aa15.96■□□□□ 0.15
CNOT3-208ENST00000613073 MYO9BQ13459 2157 aa15.96■□□□□ 0.15
CNOT3-208ENST00000613073 SLC1A7O00341 560 aa15.96■□□□□ 0.15
CNOT3-208ENST00000613073 SSX4O60224 188 aa15.96■□□□□ 0.15
CNOT3-208ENST00000613073 UPK1BO75841 260 aa15.96■□□□□ 0.15
CNOT3-208ENST00000613073 CYP2A6P11509 494 aaPredicted RBP15.96■□□□□ 0.15
CNOT3-208ENST00000613073 ADH5P11766 374 aa15.96■□□□□ 0.15
CNOT3-208ENST00000613073 HRH2P25021 359 aa15.96■□□□□ 0.15
CNOT3-208ENST00000613073 MTHFRP42898 656 aa15.96■□□□□ 0.15
CNOT3-208ENST00000613073 DGKQP52824 942 aa15.96■□□□□ 0.15
CNOT3-208ENST00000613073 KCNAB2Q13303 367 aa15.96■□□□□ 0.15
CNOT3-208ENST00000613073 PRMT9Q6P2P2 845 aa15.96■□□□□ 0.15
CNOT3-208ENST00000613073 CYP20A1Q6UW02 462 aa15.96■□□□□ 0.15
CNOT3-208ENST00000613073 PLD3Q8IV08 490 aa15.96■□□□□ 0.15
CNOT3-208ENST00000613073 SUN5Q8TC36 379 aa15.96■□□□□ 0.15
CNOT3-208ENST00000613073 FAR1Q8WVX9 515 aa15.96■□□□□ 0.15
CNOT3-208ENST00000613073 SMG7Q92540 1137 aaKnown RBP15.96■□□□□ 0.15
CNOT3-208ENST00000613073 TRIM39Q9HCM9 518 aa15.96■□□□□ 0.15
CNOT3-208ENST00000613073 ZNF490Q9ULM2 529 aaPredicted RBP15.96■□□□□ 0.15
CNOT3-208ENST00000613073 TMEM202A6NGA9 273 aa15.95■□□□□ 0.14
CNOT3-208ENST00000613073 FADS2P1A8MWK0 482 aa15.95■□□□□ 0.14
CNOT3-208ENST00000613073 UPK3BL1B0FP48 263 aa15.95■□□□□ 0.14
CNOT3-208ENST00000613073 UPK3BL2E5RIL1 263 aa15.95■□□□□ 0.14
CNOT3-208ENST00000613073 UPK1AO00322 258 aa15.95■□□□□ 0.14
CNOT3-208ENST00000613073 CA3P07451 260 aa15.95■□□□□ 0.14
CNOT3-208ENST00000613073 FMO3P31513 532 aa15.95■□□□□ 0.14
CNOT3-208ENST00000613073 PTGR1Q14914 329 aa15.95■□□□□ 0.14
CNOT3-208ENST00000613073 KIAA0907Q7Z7F0 614 aaPredicted RBP15.95■□□□□ 0.14
CNOT3-208ENST00000613073 P2RY8Q86VZ1 359 aa15.95■□□□□ 0.14
CNOT3-208ENST00000613073 PEX5LQ8IYB4 626 aa15.95■□□□□ 0.14
CNOT3-208ENST00000613073 ZNF557Q8N988 423 aaPredicted RBP15.95■□□□□ 0.14
CNOT3-208ENST00000613073 LEMD2Q8NC56 503 aa15.95■□□□□ 0.14
CNOT3-208ENST00000613073 ZNF555Q8NEP9 628 aa15.95■□□□□ 0.14
CNOT3-208ENST00000613073 RHOXF1Q8NHV9 184 aa15.95■□□□□ 0.14
CNOT3-208ENST00000613073 MCFD2Q8NI22 146 aa15.95■□□□□ 0.14
CNOT3-208ENST00000613073 WRAP53Q9BUR4 548 aaKnown RBP15.95■□□□□ 0.14
CNOT3-208ENST00000613073 BTBD2Q9BX70 525 aa15.95■□□□□ 0.14
CNOT3-208ENST00000613073 ACTL8Q9H568 366 aa15.95■□□□□ 0.14
CNOT3-208ENST00000613073 C8orf4Q9NR00 106 aa15.95■□□□□ 0.14
CNOT3-208ENST00000613073 MARK1Q9P0L2 795 aa15.95■□□□□ 0.14
CNOT3-208ENST00000613073 ERVK-18Q9QC07 812 aa15.95■□□□□ 0.14
CNOT3-208ENST00000613073 KPNA3O00505 521 aaPredicted RBP15.95■□□□□ 0.14
CNOT3-208ENST00000613073 ZNF197O14709 1029 aa15.95■□□□□ 0.14
CNOT3-208ENST00000613073 SLC22A1O15245 554 aa15.95■□□□□ 0.14
CNOT3-208ENST00000613073 ULK1O75385 1050 aa15.95■□□□□ 0.14
CNOT3-208ENST00000613073 CBSLP0DN79 551 aa15.95■□□□□ 0.14
CNOT3-208ENST00000613073 HLA-EP13747 358 aa15.95■□□□□ 0.14
CNOT3-208ENST00000613073 ALOX12P18054 663 aa15.95■□□□□ 0.14
CNOT3-208ENST00000613073 PCMT1P22061 227 aa15.95■□□□□ 0.14
CNOT3-208ENST00000613073 CBSP35520 551 aa15.95■□□□□ 0.14
CNOT3-208ENST00000613073 SLC6A11P48066 632 aa15.95■□□□□ 0.14
CNOT3-208ENST00000613073 IL1RL1Q01638 556 aa15.95■□□□□ 0.14
CNOT3-208ENST00000613073 PRKG2Q13237 762 aa15.95■□□□□ 0.14
CNOT3-208ENST00000613073 ZDHHC20Q5W0Z9 365 aa15.95■□□□□ 0.14
CNOT3-208ENST00000613073 ZDHHC13Q8IUH4 622 aa15.95■□□□□ 0.14
CNOT3-208ENST00000613073 PIK3C3Q8NEB9 887 aa15.95■□□□□ 0.14
CNOT3-208ENST00000613073 NXPE3Q969Y0 559 aa15.95■□□□□ 0.14
CNOT3-208ENST00000613073 NSMCE2Q96MF7 247 aa15.95■□□□□ 0.14
CNOT3-208ENST00000613073 ASPSCR1Q9BZE9 553 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms