RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 ABHD18Q0P651 414 aa13.6□□□□□ -0.23
PCDHGA3-202ENST00000612467 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.6□□□□□ -0.23
PCDHGA3-202ENST00000612467 METTL2BQ6P1Q9 378 aaKnown RBP13.6□□□□□ -0.23
PCDHGA3-202ENST00000612467 ZC3H7AQ8IWR0 971 aaKnown RBP13.6□□□□□ -0.23
PCDHGA3-202ENST00000612467 EID3Q8N140 333 aa13.6□□□□□ -0.23
PCDHGA3-202ENST00000612467 ZCCHC7Q8N3Z6 543 aaKnown RBP13.6□□□□□ -0.23
PCDHGA3-202ENST00000612467 ZNF480Q8WV37 535 aa13.6□□□□□ -0.23
PCDHGA3-202ENST00000612467 TANKQ92844 425 aa13.6□□□□□ -0.23
PCDHGA3-202ENST00000612467 CSF3RQ99062 836 aa13.6□□□□□ -0.23
PCDHGA3-202ENST00000612467 OR51B5Q9H339 312 aa13.6□□□□□ -0.23
PCDHGA3-202ENST00000612467 KLHL42Q9P2K6 505 aa13.6□□□□□ -0.23
PCDHGA3-202ENST00000612467 RAPGEFL1Q9UHV5 662 aa13.6□□□□□ -0.23
PCDHGA3-202ENST00000612467 EXO1Q9UQ84 846 aaKnown RBP13.6□□□□□ -0.23
PCDHGA3-202ENST00000612467 GNG14A0A1W2PPG7 69 aa13.59□□□□□ -0.23
PCDHGA3-202ENST00000612467 SLC5A10A0PJK1 596 aa13.59□□□□□ -0.23
PCDHGA3-202ENST00000612467 FKBP9O95302 570 aa13.59□□□□□ -0.23
PCDHGA3-202ENST00000612467 NNMTP40261 264 aa13.59□□□□□ -0.23
PCDHGA3-202ENST00000612467 DGKGP49619 791 aa13.59□□□□□ -0.23
PCDHGA3-202ENST00000612467 TBPL1P62380 186 aa13.59□□□□□ -0.23
PCDHGA3-202ENST00000612467 SP140Q13342 867 aa13.59□□□□□ -0.23
PCDHGA3-202ENST00000612467 SMN1Q16637 294 aaKnown RBP13.59□□□□□ -0.23
PCDHGA3-202ENST00000612467 ARHGAP15Q53QZ3 475 aa13.59□□□□□ -0.23
PCDHGA3-202ENST00000612467 C6orf141Q5SZD1 244 aa13.59□□□□□ -0.23
PCDHGA3-202ENST00000612467 CPZQ66K79 652 aa13.59□□□□□ -0.23
PCDHGA3-202ENST00000612467 ZNF773Q6PK81 442 aa13.59□□□□□ -0.23
PCDHGA3-202ENST00000612467 Q6ZPB1 254 aaPredicted RBP13.59□□□□□ -0.23
PCDHGA3-202ENST00000612467 FKBP9P1Q75LS8 142 aa13.59□□□□□ -0.23
PCDHGA3-202ENST00000612467 ARHGAP22Q7Z5H3 698 aa13.59□□□□□ -0.23
PCDHGA3-202ENST00000612467 AADATQ8N5Z0 425 aa13.59□□□□□ -0.23
PCDHGA3-202ENST00000612467 ARL10Q8N8L6 244 aa13.59□□□□□ -0.23
PCDHGA3-202ENST00000612467 HSH2DQ96JZ2 352 aa13.59□□□□□ -0.23
PCDHGA3-202ENST00000612467 HHIPQ96QV1 700 aa13.59□□□□□ -0.23
PCDHGA3-202ENST00000612467 ZSCAN5AQ9BUG6 496 aa13.59□□□□□ -0.23
PCDHGA3-202ENST00000612467 C11orf49Q9H6J7 331 aa13.59□□□□□ -0.23
PCDHGA3-202ENST00000612467 PREBQ9HCU5 417 aa13.59□□□□□ -0.23
PCDHGA3-202ENST00000612467 SPATA6Q9NWH7 488 aaPredicted RBP13.59□□□□□ -0.23
PCDHGA3-202ENST00000612467 SIRT5Q9NXA8 310 aa13.59□□□□□ -0.23
PCDHGA3-202ENST00000612467 ATXN10Q9UBB4 475 aa13.59□□□□□ -0.23
PCDHGA3-202ENST00000612467 CFAP20Q9Y6A4 193 aaKnown RBP13.59□□□□□ -0.23
PCDHGA3-202ENST00000612467 CCDC88CQ9P219 2028 aa13.59□□□□□ -0.23
PCDHGA3-202ENST00000612467 PLXND1Q9Y4D7 1925 aa13.59□□□□□ -0.23
PCDHGA3-202ENST00000612467 EVPLLA8MZ36 301 aa13.59□□□□□ -0.23
PCDHGA3-202ENST00000612467 ATG13O75143 517 aa13.59□□□□□ -0.23
PCDHGA3-202ENST00000612467 DAPP51397 102 aa13.59□□□□□ -0.23
PCDHGA3-202ENST00000612467 CREMQ03060 361 aa13.59□□□□□ -0.23
PCDHGA3-202ENST00000612467 MTAPQ13126 283 aa13.59□□□□□ -0.23
PCDHGA3-202ENST00000612467 PRSS53Q2L4Q9 553 aa13.59□□□□□ -0.23
PCDHGA3-202ENST00000612467 VMACQ2NL98 169 aa13.59□□□□□ -0.23
PCDHGA3-202ENST00000612467 CDKL4Q5MAI5 379 aa13.59□□□□□ -0.23
PCDHGA3-202ENST00000612467 COX20Q5RI15 118 aa13.59□□□□□ -0.23
PCDHGA3-202ENST00000612467 C1orf53Q5VUE5 145 aa13.59□□□□□ -0.23
PCDHGA3-202ENST00000612467 ADHFE1Q8IWW8 467 aa13.59□□□□□ -0.23
PCDHGA3-202ENST00000612467 SPARTQ8N0X7 666 aa13.59□□□□□ -0.23
PCDHGA3-202ENST00000612467 ZNF555Q8NEP9 628 aa13.59□□□□□ -0.23
PCDHGA3-202ENST00000612467 OR5K1Q8NHB7 308 aa13.59□□□□□ -0.23
PCDHGA3-202ENST00000612467 SPPL3Q8TCT6 385 aa13.59□□□□□ -0.23
PCDHGA3-202ENST00000612467 CLP1Q92989 425 aaKnown RBP13.59□□□□□ -0.23
PCDHGA3-202ENST00000612467 CIDECQ96AQ7 238 aaPredicted RBP13.59□□□□□ -0.23
PCDHGA3-202ENST00000612467 ARRDC3Q96B67 414 aa13.59□□□□□ -0.23
PCDHGA3-202ENST00000612467 RBM4BQ9BQ04 359 aaKnown RBP13.59□□□□□ -0.23
PCDHGA3-202ENST00000612467 DUSP26Q9BV47 211 aa13.59□□□□□ -0.23
PCDHGA3-202ENST00000612467 RBM4Q9BWF3 364 aaKnown RBP13.59□□□□□ -0.23
PCDHGA3-202ENST00000612467 TPT1P8Q9HAU6 139 aa13.59□□□□□ -0.23
PCDHGA3-202ENST00000612467 MAFFQ9ULX9 164 aa13.59□□□□□ -0.23
PCDHGA3-202ENST00000612467 TMEM98Q9Y2Y6 226 aa13.59□□□□□ -0.23
PCDHGA3-202ENST00000612467 H3BM21 787 aa13.58□□□□□ -0.24
PCDHGA3-202ENST00000612467 EPN2O95208 641 aa13.58□□□□□ -0.24
PCDHGA3-202ENST00000612467 CISD3P0C7P0 127 aa13.58□□□□□ -0.24
PCDHGA3-202ENST00000612467 PRPS1L1P21108 318 aa13.58□□□□□ -0.24
PCDHGA3-202ENST00000612467 PRPH2P23942 346 aa13.58□□□□□ -0.24
PCDHGA3-202ENST00000612467 ISL1P61371 349 aa13.58□□□□□ -0.24
PCDHGA3-202ENST00000612467 IL5RAQ01344 420 aa13.58□□□□□ -0.24
PCDHGA3-202ENST00000612467 NFE2L1Q14494 772 aa13.58□□□□□ -0.24
PCDHGA3-202ENST00000612467 PRSS36Q5K4E3 855 aa13.58□□□□□ -0.24
PCDHGA3-202ENST00000612467 LDLRAP1Q5SW96 308 aa13.58□□□□□ -0.24
PCDHGA3-202ENST00000612467 ZDHHC20Q5W0Z9 365 aa13.58□□□□□ -0.24
PCDHGA3-202ENST00000612467 DPPA4Q7L190 304 aa13.58□□□□□ -0.24
PCDHGA3-202ENST00000612467 RASGRP3Q8IV61 690 aa13.58□□□□□ -0.24
PCDHGA3-202ENST00000612467 CHCHD4Q8N4Q1 142 aa13.58□□□□□ -0.24
PCDHGA3-202ENST00000612467 OR5AK3PQ8NH89 298 aa13.58□□□□□ -0.24
PCDHGA3-202ENST00000612467 WDR48Q8TAF3 677 aa13.58□□□□□ -0.24
PCDHGA3-202ENST00000612467 BADQ92934 168 aa13.58□□□□□ -0.24
PCDHGA3-202ENST00000612467 CCM2Q9BSQ5 444 aa13.58□□□□□ -0.24
PCDHGA3-202ENST00000612467 C8orf4Q9NR00 106 aa13.58□□□□□ -0.24
PCDHGA3-202ENST00000612467 EIF3FO00303 357 aaPredicted RBP13.58□□□□□ -0.24
PCDHGA3-202ENST00000612467 SLC16A5O15375 505 aa13.58□□□□□ -0.24
PCDHGA3-202ENST00000612467 PCDH7O60245 1069 aa13.58□□□□□ -0.24
PCDHGA3-202ENST00000612467 RECQL5O94762 991 aaPredicted RBP13.58□□□□□ -0.24
PCDHGA3-202ENST00000612467 INMTO95050 263 aa13.58□□□□□ -0.24
PCDHGA3-202ENST00000612467 MAPK1P28482 360 aa13.58□□□□□ -0.24
PCDHGA3-202ENST00000612467 PRLHRP49683 370 aa13.58□□□□□ -0.24
PCDHGA3-202ENST00000612467 EPHA5P54756 1037 aa13.58□□□□□ -0.24
PCDHGA3-202ENST00000612467 HTRA4P83105 476 aaPredicted RBP13.58□□□□□ -0.24
PCDHGA3-202ENST00000612467 LIPJQ5W064 366 aa13.58□□□□□ -0.24
PCDHGA3-202ENST00000612467 RAET1GQ6H3X3 334 aa13.58□□□□□ -0.24
PCDHGA3-202ENST00000612467 TMC5Q6UXY8 1006 aa13.58□□□□□ -0.24
PCDHGA3-202ENST00000612467 TRMT11Q7Z4G4 463 aaKnown RBP13.58□□□□□ -0.24
PCDHGA3-202ENST00000612467 NAGSQ8N159 534 aa13.58□□□□□ -0.24
PCDHGA3-202ENST00000612467 PJA1Q8NG27 643 aa13.58□□□□□ -0.24
PCDHGA3-202ENST00000612467 CSGALNACT1Q8TDX6 532 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms