RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 CATP04040 527 aaKnown RBP8.51□□□□□ -1.05
SMAD4-217ENST00000611848 JUNP05412 331 aaKnown RBP8.51□□□□□ -1.05
SMAD4-217ENST00000611848 JMJD7P0C870 316 aa8.51□□□□□ -1.05
SMAD4-217ENST00000611848 CD1DP15813 335 aa8.51□□□□□ -1.05
SMAD4-217ENST00000611848 POLR2CP19387 275 aaPredicted RBP8.51□□□□□ -1.05
SMAD4-217ENST00000611848 ITGAXP20702 1163 aa8.51□□□□□ -1.05
SMAD4-217ENST00000611848 PIK3R1P27986 724 aa8.51□□□□□ -1.05
SMAD4-217ENST00000611848 EPHA3P29320 983 aa8.51□□□□□ -1.05
SMAD4-217ENST00000611848 RBMS1P29558 406 aaKnown RBP8.51□□□□□ -1.05
SMAD4-217ENST00000611848 KCNC1P48547 511 aa8.51□□□□□ -1.05
SMAD4-217ENST00000611848 PTDSS1P48651 473 aaKnown RBP8.51□□□□□ -1.05
SMAD4-217ENST00000611848 RAB28P51157 221 aa8.51□□□□□ -1.05
SMAD4-217ENST00000611848 GABREP78334 506 aa8.51□□□□□ -1.05
SMAD4-217ENST00000611848 SLC34A1Q06495 639 aa8.51□□□□□ -1.05
SMAD4-217ENST00000611848 C16orf72Q14CZ0 275 aa8.51□□□□□ -1.05
SMAD4-217ENST00000611848 SNAP47Q5SQN1 464 aa8.51□□□□□ -1.05
SMAD4-217ENST00000611848 C6orf163Q5TEZ5 329 aa8.51□□□□□ -1.05
SMAD4-217ENST00000611848 CACHD1Q5VU97 1274 aa8.51□□□□□ -1.05
SMAD4-217ENST00000611848 PAQR3Q6TCH7 311 aa8.51□□□□□ -1.05
SMAD4-217ENST00000611848 UNQ6494/PRO21346Q6UXR6 183 aa8.51□□□□□ -1.05
SMAD4-217ENST00000611848 CYHR1Q6ZMK1 362 aa8.51□□□□□ -1.05
SMAD4-217ENST00000611848 RIPOR1Q6ZS17 1223 aa8.51□□□□□ -1.05
SMAD4-217ENST00000611848 FRMD7Q6ZUT3 714 aa8.51□□□□□ -1.05
SMAD4-217ENST00000611848 PRSS42Q7Z5A4 293 aa8.51□□□□□ -1.05
SMAD4-217ENST00000611848 CPNE9Q8IYJ1 553 aa8.51□□□□□ -1.05
SMAD4-217ENST00000611848 FBXO15Q8NCQ5 510 aaPredicted RBP8.51□□□□□ -1.05
SMAD4-217ENST00000611848 RCBTB1Q8NDN9 531 aa8.51□□□□□ -1.05
SMAD4-217ENST00000611848 RP9Q8TA86 221 aaKnown RBP8.51□□□□□ -1.05
SMAD4-217ENST00000611848 RHEBL1Q8TAI7 183 aa8.51□□□□□ -1.05
SMAD4-217ENST00000611848 PTERQ96BW5 349 aa8.51□□□□□ -1.05
SMAD4-217ENST00000611848 CLPTM1LQ96KA5 538 aa8.51□□□□□ -1.05
SMAD4-217ENST00000611848 RAB11FIP5Q9BXF6 653 aa8.51□□□□□ -1.05
SMAD4-217ENST00000611848 GSTO2Q9H4Y5 243 aa8.51□□□□□ -1.05
SMAD4-217ENST00000611848 ZNF768Q9H5H4 540 aaKnown RBP8.51□□□□□ -1.05
SMAD4-217ENST00000611848 SYTL2Q9HCH5 934 aa8.51□□□□□ -1.05
SMAD4-217ENST00000611848 DKK4Q9UBT3 224 aa8.51□□□□□ -1.05
SMAD4-217ENST00000611848 KLHL3Q9UH77 587 aa8.51□□□□□ -1.05
SMAD4-217ENST00000611848 ICKQ9UPZ9 632 aa8.51□□□□□ -1.05
SMAD4-217ENST00000611848 AKAP13Q12802 2813 aa8.51□□□□□ -1.05
SMAD4-217ENST00000611848 SPTBP11277 2137 aa8.51□□□□□ -1.05
SMAD4-217ENST00000611848 MAP1BP46821 2468 aaKnown RBP8.51□□□□□ -1.05
SMAD4-217ENST00000611848 GOLGA8QA0A0J9YX86 632 aa8.51□□□□□ -1.05
SMAD4-217ENST00000611848 LOC100653049A0A140TA62 436 aa8.51□□□□□ -1.05
SMAD4-217ENST00000611848 A0A1W2PNU3 283 aaPredicted RBP8.51□□□□□ -1.05
SMAD4-217ENST00000611848 GSAPA4D1B5 854 aa8.51□□□□□ -1.05
SMAD4-217ENST00000611848 GOLGA8OA6NCC3 632 aa8.51□□□□□ -1.05
SMAD4-217ENST00000611848 TLCD2A6NGC4 264 aa8.51□□□□□ -1.05
SMAD4-217ENST00000611848 A8MU76 341 aa8.51□□□□□ -1.05
SMAD4-217ENST00000611848 C2orf74A8MZ97 194 aa8.51□□□□□ -1.05
SMAD4-217ENST00000611848 TMEM233B4DJY2 109 aa8.51□□□□□ -1.05
SMAD4-217ENST00000611848 B4E171 279 aa8.51□□□□□ -1.05
SMAD4-217ENST00000611848 GOLGA8NF8WBI6 632 aa8.51□□□□□ -1.05
SMAD4-217ENST00000611848 H0Y3Z8 333 aa8.51□□□□□ -1.05
SMAD4-217ENST00000611848 GFYI3L273 518 aa8.51□□□□□ -1.05
SMAD4-217ENST00000611848 BTN3A3O00478 584 aa8.51□□□□□ -1.05
SMAD4-217ENST00000611848 BTN3A1O00481 513 aa8.51□□□□□ -1.05
SMAD4-217ENST00000611848 SLC16A5O15375 505 aa8.51□□□□□ -1.05
SMAD4-217ENST00000611848 KRT34O76011 436 aa8.51□□□□□ -1.05
SMAD4-217ENST00000611848 ZNF37AP17032 561 aaPredicted RBP8.51□□□□□ -1.05
SMAD4-217ENST00000611848 MAP4P27816 1152 aaKnown RBP8.51□□□□□ -1.05
SMAD4-217ENST00000611848 PKLRP30613 574 aa8.51□□□□□ -1.05
SMAD4-217ENST00000611848 TSPAN7P41732 249 aa8.51□□□□□ -1.05
SMAD4-217ENST00000611848 IL2P60568 153 aa8.51□□□□□ -1.05
SMAD4-217ENST00000611848 GRB7Q14451 532 aa8.51□□□□□ -1.05
SMAD4-217ENST00000611848 RCN1Q15293 331 aa8.51□□□□□ -1.05
SMAD4-217ENST00000611848 ZNF678Q5SXM1 525 aa8.51□□□□□ -1.05
SMAD4-217ENST00000611848 FAM92BQ6ZTR7 304 aa8.51□□□□□ -1.05
SMAD4-217ENST00000611848 CHSY3Q70JA7 882 aa8.51□□□□□ -1.05
SMAD4-217ENST00000611848 KMT5CQ86Y97 462 aa8.51□□□□□ -1.05
SMAD4-217ENST00000611848 SPNS2Q8IVW8 549 aa8.51□□□□□ -1.05
SMAD4-217ENST00000611848 ADGRF3Q8IZF5 1079 aa8.51□□□□□ -1.05
SMAD4-217ENST00000611848 MYO1HQ8N1T3 1032 aa8.51□□□□□ -1.05
SMAD4-217ENST00000611848 NKAPQ8N5F7 415 aaKnown RBP8.51□□□□□ -1.05
SMAD4-217ENST00000611848 EEF1AKMT1Q8WVE0 214 aa8.51□□□□□ -1.05
SMAD4-217ENST00000611848 ASB11Q8WXH4 323 aa8.51□□□□□ -1.05
SMAD4-217ENST00000611848 STMN2Q93045 179 aa8.51□□□□□ -1.05
SMAD4-217ENST00000611848 SLC22A18Q96BI1 424 aa8.51□□□□□ -1.05
SMAD4-217ENST00000611848 PDLIM5Q96HC4 596 aaKnown RBP8.51□□□□□ -1.05
SMAD4-217ENST00000611848 ZNF570Q96NI8 536 aa8.51□□□□□ -1.05
SMAD4-217ENST00000611848 SLC46A1Q96NT5 459 aa8.51□□□□□ -1.05
SMAD4-217ENST00000611848 MAP3K3Q99759 626 aa8.51□□□□□ -1.05
SMAD4-217ENST00000611848 MENTQ9BUN1 341 aa8.51□□□□□ -1.05
SMAD4-217ENST00000611848 SHCBP1LQ9BZQ2 653 aa8.51□□□□□ -1.05
SMAD4-217ENST00000611848 B3GNT4Q9C0J1 378 aa8.51□□□□□ -1.05
SMAD4-217ENST00000611848 XKR8Q9H6D3 395 aa8.51□□□□□ -1.05
SMAD4-217ENST00000611848 CCDC86Q9H6F5 360 aaKnown RBP8.51□□□□□ -1.05
SMAD4-217ENST00000611848 ALG9Q9H6U8 611 aa8.51□□□□□ -1.05
SMAD4-217ENST00000611848 MEAF6Q9HAF1 191 aa8.51□□□□□ -1.05
SMAD4-217ENST00000611848 C1GALT1Q9NS00 363 aa8.51□□□□□ -1.05
SMAD4-217ENST00000611848 MRGBPQ9NV56 204 aa8.51□□□□□ -1.05
SMAD4-217ENST00000611848 ACTR10Q9NZ32 417 aa8.51□□□□□ -1.05
SMAD4-217ENST00000611848 SPATA7Q9P0W8 599 aa8.51□□□□□ -1.05
SMAD4-217ENST00000611848 POMT2Q9UKY4 750 aa8.51□□□□□ -1.05
SMAD4-217ENST00000611848 HEATR5BQ9P2D3 2071 aa8.5□□□□□ -1.05
SMAD4-217ENST00000611848 CCDC189A1A4V9 331 aa8.5□□□□□ -1.05
SMAD4-217ENST00000611848 PIPSLA2A3N6 862 aa8.5□□□□□ -1.05
SMAD4-217ENST00000611848 ZNF839A8K0R7 811 aa8.5□□□□□ -1.05
SMAD4-217ENST00000611848 C1QTNF9BB2RNN3 333 aa8.5□□□□□ -1.05
SMAD4-217ENST00000611848 BRINP1O60477 761 aa8.5□□□□□ -1.05
SMAD4-217ENST00000611848 SMIM24O75264 130 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms