RNA–Protein interactions for RNA: ENST00000609684.2

PCDHB16-201, Transcript of protocadherin beta 16, humanhuman

APPRIS P1 BASIC

Gene PCDHB16, Length 5,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16-201ENST00000609684 NPPAP01160 153 aa13.85□□□□□ -0.19
PCDHB16-201ENST00000609684 FPR1P21462 350 aa13.85□□□□□ -0.19
PCDHB16-201ENST00000609684 ALDH3A2P51648 485 aa13.85□□□□□ -0.19
PCDHB16-201ENST00000609684 KLHL22Q53GT1 634 aa13.85□□□□□ -0.19
PCDHB16-201ENST00000609684 CLEC12AQ5QGZ9 265 aa13.85□□□□□ -0.19
PCDHB16-201ENST00000609684 BICRALQ6AI39 1079 aa13.85□□□□□ -0.19
PCDHB16-201ENST00000609684 RAB43Q86YS6 212 aa13.85□□□□□ -0.19
PCDHB16-201ENST00000609684 SLC7A6OSQ96CW6 309 aaPredicted RBP13.85□□□□□ -0.19
PCDHB16-201ENST00000609684 CREBZFQ9NS37 354 aa13.85□□□□□ -0.19
PCDHB16-201ENST00000609684 SNTG1Q9NSN8 517 aa13.85□□□□□ -0.19
PCDHB16-201ENST00000609684 LOC100130705A0A1B0GUX0 176 aa13.84□□□□□ -0.19
PCDHB16-201ENST00000609684 GIMD1P0DJR0 217 aa13.84□□□□□ -0.19
PCDHB16-201ENST00000609684 GLDCP23378 1020 aa13.84□□□□□ -0.19
PCDHB16-201ENST00000609684 RFC2P35250 354 aa13.84□□□□□ -0.19
PCDHB16-201ENST00000609684 ETV3P41162 512 aa13.84□□□□□ -0.19
PCDHB16-201ENST00000609684 ACADVLP49748 655 aa13.84□□□□□ -0.19
PCDHB16-201ENST00000609684 NDUFA5Q16718 116 aa13.84□□□□□ -0.19
PCDHB16-201ENST00000609684 SLC8B1Q6J4K2 584 aa13.84□□□□□ -0.19
PCDHB16-201ENST00000609684 LRRTM3Q86VH5 581 aa13.84□□□□□ -0.19
PCDHB16-201ENST00000609684 OR9A1PQ8NGU1 263 aa13.84□□□□□ -0.19
PCDHB16-201ENST00000609684 ANKHQ9HCJ1 492 aa13.84□□□□□ -0.19
PCDHB16-201ENST00000609684 H1F0P07305 194 aaKnown RBP13.84□□□□□ -0.19
PCDHB16-201ENST00000609684 NUDT6P53370 316 aa13.84□□□□□ -0.19
PCDHB16-201ENST00000609684 SCN1BQ07699 218 aa13.84□□□□□ -0.19
PCDHB16-201ENST00000609684 PLEKHS1Q5SXH7 462 aa13.84□□□□□ -0.19
PCDHB16-201ENST00000609684 ARFGAP1Q8N6T3 406 aa13.84□□□□□ -0.19
PCDHB16-201ENST00000609684 ELAC1Q9H777 363 aaKnown RBP13.84□□□□□ -0.19
PCDHB16-201ENST00000609684 UBAP1Q9NZ09 502 aa13.84□□□□□ -0.19
PCDHB16-201ENST00000609684 NFKBIL1Q9UBC1 381 aaPredicted RBP13.84□□□□□ -0.19
PCDHB16-201ENST00000609684 POFUT2Q9Y2G5 429 aa13.84□□□□□ -0.19
PCDHB16-201ENST00000609684 SETD1AO15047 1707 aaKnown RBP13.84□□□□□ -0.19
PCDHB16-201ENST00000609684 DGKEP52429 567 aa13.84□□□□□ -0.19
PCDHB16-201ENST00000609684 LAPTM4AQ15012 233 aa13.84□□□□□ -0.19
PCDHB16-201ENST00000609684 GPR68Q15743 365 aa13.84□□□□□ -0.19
PCDHB16-201ENST00000609684 TRPV1Q8NER1 839 aa13.84□□□□□ -0.19
PCDHB16-201ENST00000609684 TSEN15Q8WW01 171 aaKnown RBP13.84□□□□□ -0.19
PCDHB16-201ENST00000609684 UFD1Q92890 307 aa13.84□□□□□ -0.19
PCDHB16-201ENST00000609684 PMEPA1Q969W9 287 aa13.84□□□□□ -0.19
PCDHB16-201ENST00000609684 ZUFSPQ96AP4 578 aa13.84□□□□□ -0.19
PCDHB16-201ENST00000609684 KCNN2Q9H2S1 579 aa13.84□□□□□ -0.19
PCDHB16-201ENST00000609684 CKLFQ9UBR5 152 aa13.84□□□□□ -0.19
PCDHB16-201ENST00000609684 CLIC3O95833 236 aa13.84□□□□□ -0.19
PCDHB16-201ENST00000609684 C6orf47O95873 294 aa13.84□□□□□ -0.19
PCDHB16-201ENST00000609684 ITGB1P05556 798 aa13.84□□□□□ -0.19
PCDHB16-201ENST00000609684 RAB8AP61006 207 aa13.84□□□□□ -0.19
PCDHB16-201ENST00000609684 PM20D1Q6GTS8 502 aa13.84□□□□□ -0.19
PCDHB16-201ENST00000609684 DCUN1D3Q8IWE4 304 aa13.84□□□□□ -0.19
PCDHB16-201ENST00000609684 MEAF6Q9HAF1 191 aa13.84□□□□□ -0.19
PCDHB16-201ENST00000609684 ZCWPW2A0A1B0GU75 182 aa13.83□□□□□ -0.19
PCDHB16-201ENST00000609684 PRAMEF12O95522 483 aa13.83□□□□□ -0.19
PCDHB16-201ENST00000609684 C8BP07358 591 aa13.83□□□□□ -0.19
PCDHB16-201ENST00000609684 SLC10A3P09131 477 aa13.83□□□□□ -0.19
PCDHB16-201ENST00000609684 CD68P34810 354 aaPredicted RBP13.83□□□□□ -0.19
PCDHB16-201ENST00000609684 BTN3A2P78410 334 aa13.83□□□□□ -0.19
PCDHB16-201ENST00000609684 MEF2AQ02078 507 aaPredicted RBP13.83□□□□□ -0.19
PCDHB16-201ENST00000609684 CBX3Q13185 183 aa13.83□□□□□ -0.19
PCDHB16-201ENST00000609684 SUZ12Q15022 739 aaKnown RBP13.83□□□□□ -0.19
PCDHB16-201ENST00000609684 ZNF776Q68DI1 518 aaPredicted RBP13.83□□□□□ -0.19
PCDHB16-201ENST00000609684 OR4K1Q8NGD4 311 aa13.83□□□□□ -0.19
PCDHB16-201ENST00000609684 TSPEARQ8WU66 669 aa13.83□□□□□ -0.19
PCDHB16-201ENST00000609684 AURKBQ96GD4 344 aaPredicted RBP13.83□□□□□ -0.19
PCDHB16-201ENST00000609684 DLGAP4Q9Y2H0 992 aa13.83□□□□□ -0.19
PCDHB16-201ENST00000609684 MRPS17Q9Y2R5 130 aaKnown RBP13.83□□□□□ -0.19
PCDHB16-201ENST00000609684 MBLAC1A4D2B0 266 aaPredicted RBP13.83□□□□□ -0.2
PCDHB16-201ENST00000609684 FESP07332 822 aa13.83□□□□□ -0.2
PCDHB16-201ENST00000609684 GRK6P43250 576 aa13.83□□□□□ -0.2
PCDHB16-201ENST00000609684 NRIP1P48552 1158 aa13.83□□□□□ -0.2
PCDHB16-201ENST00000609684 ARFIP1P53367 373 aa13.83□□□□□ -0.2
PCDHB16-201ENST00000609684 PPP2R2BQ00005 443 aa13.83□□□□□ -0.2
PCDHB16-201ENST00000609684 C5orf22Q49AR2 442 aa13.83□□□□□ -0.2
PCDHB16-201ENST00000609684 USP43Q70EL4 1123 aa13.83□□□□□ -0.2
PCDHB16-201ENST00000609684 TRNT1Q96Q11 434 aaKnown RBP13.83□□□□□ -0.2
PCDHB16-201ENST00000609684 CLDND1Q9NY35 253 aa13.83□□□□□ -0.2
PCDHB16-201ENST00000609684 SPIN1Q9Y657 262 aaPredicted RBP13.83□□□□□ -0.2
PCDHB16-201ENST00000609684 TLR4O00206 839 aa13.83□□□□□ -0.2
PCDHB16-201ENST00000609684 AXIN1O15169 862 aa13.83□□□□□ -0.2
PCDHB16-201ENST00000609684 KMOO15229 486 aa13.83□□□□□ -0.2
PCDHB16-201ENST00000609684 HTRA2O43464 458 aaPredicted RBP13.83□□□□□ -0.2
PCDHB16-201ENST00000609684 TSPAN6O43657 245 aa13.83□□□□□ -0.2
PCDHB16-201ENST00000609684 RLN1P04808 185 aa13.83□□□□□ -0.2
PCDHB16-201ENST00000609684 ACRV1P26436 265 aa13.83□□□□□ -0.2
PCDHB16-201ENST00000609684 SPATS1Q496A3 300 aa13.83□□□□□ -0.2
PCDHB16-201ENST00000609684 KIAA1161Q6NSJ0 714 aa13.83□□□□□ -0.2
PCDHB16-201ENST00000609684 TTC9BQ8N6N2 239 aa13.83□□□□□ -0.2
PCDHB16-201ENST00000609684 RETREG1Q9H6L5 497 aa13.83□□□□□ -0.2
PCDHB16-201ENST00000609684 RPF2Q9H7B2 306 aaKnown RBP13.83□□□□□ -0.2
PCDHB16-201ENST00000609684 TRPV5Q9NQA5 729 aa13.83□□□□□ -0.2
PCDHB16-201ENST00000609684 K7ERQ8 282 aa13.83□□□□□ -0.2
PCDHB16-201ENST00000609684 GRID2O43424 1007 aa13.83□□□□□ -0.2
PCDHB16-201ENST00000609684 PFKMP08237 780 aa13.83□□□□□ -0.2
PCDHB16-201ENST00000609684 FDXRP22570 491 aa13.83□□□□□ -0.2
PCDHB16-201ENST00000609684 IL12BP29460 328 aa13.83□□□□□ -0.2
PCDHB16-201ENST00000609684 UBXN2BQ14CS0 331 aa13.83□□□□□ -0.2
PCDHB16-201ENST00000609684 ERI1Q8IV48 349 aaKnown RBP13.83□□□□□ -0.2
PCDHB16-201ENST00000609684 RELTQ969Z4 430 aa13.83□□□□□ -0.2
PCDHB16-201ENST00000609684 NEUROD4Q9HD90 331 aa13.83□□□□□ -0.2
PCDHB16-201ENST00000609684 SPHK2Q9NRA0 654 aa13.83□□□□□ -0.2
PCDHB16-201ENST00000609684 PHF11Q9UIL8 331 aa13.83□□□□□ -0.2
PCDHB16-201ENST00000609684 ALS2Q96Q42 1657 aa13.82□□□□□ -0.2
PCDHB16-201ENST00000609684 SLC22A1O15245 554 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms