RNA–Protein interactions for RNA: ENST00000609477.5

HDDC2-209, Transcript of HD domain containing 2, humanhuman

TSL 4

Gene HDDC2, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-209ENST00000609477 CXCR2P25025 360 aa13.63□□□□□ -0.23
HDDC2-209ENST00000609477 SLC6A12P48065 614 aa13.63□□□□□ -0.23
HDDC2-209ENST00000609477 ACAP2Q15057 778 aa13.63□□□□□ -0.23
HDDC2-209ENST00000609477 NDUFA9Q16795 377 aa13.63□□□□□ -0.23
HDDC2-209ENST00000609477 TEX35Q5T0J7 233 aa13.63□□□□□ -0.23
HDDC2-209ENST00000609477 MRPL14Q6P1L8 145 aaKnown RBP13.63□□□□□ -0.23
HDDC2-209ENST00000609477 CMC1Q7Z7K0 106 aa13.63□□□□□ -0.23
HDDC2-209ENST00000609477 CSNK1A1LQ8N752 337 aa13.63□□□□□ -0.23
HDDC2-209ENST00000609477 ENDOVQ8N8Q3 282 aaKnown RBP13.63□□□□□ -0.23
HDDC2-209ENST00000609477 CAMKVQ8NCB2 501 aa13.63□□□□□ -0.23
HDDC2-209ENST00000609477 SLC5A11Q8WWX8 675 aa13.63□□□□□ -0.23
HDDC2-209ENST00000609477 ALKBH8Q96BT7 664 aaKnown RBP13.63□□□□□ -0.23
HDDC2-209ENST00000609477 MTBPQ96DY7 904 aa13.63□□□□□ -0.23
HDDC2-209ENST00000609477 OR4K3Q96R72 315 aa13.63□□□□□ -0.23
HDDC2-209ENST00000609477 CCDC77Q9BR77 488 aa13.63□□□□□ -0.23
HDDC2-209ENST00000609477 ARHGAP9Q9BRR9 750 aa13.63□□□□□ -0.23
HDDC2-209ENST00000609477 PITHD1Q9GZP4 211 aaPredicted RBP13.63□□□□□ -0.23
HDDC2-209ENST00000609477 ADNPQ9H2P0 1102 aa13.63□□□□□ -0.23
HDDC2-209ENST00000609477 PELI2Q9HAT8 420 aa13.63□□□□□ -0.23
HDDC2-209ENST00000609477 GPRC5BQ9NZH0 403 aa13.63□□□□□ -0.23
HDDC2-209ENST00000609477 TUBD1Q9UJT1 453 aa13.63□□□□□ -0.23
HDDC2-209ENST00000609477 NXT1Q9UKK6 140 aaKnown RBP13.63□□□□□ -0.23
HDDC2-209ENST00000609477 RNF112Q9ULX5 631 aa13.63□□□□□ -0.23
HDDC2-209ENST00000609477 MDC1Q14676 2089 aaKnown RBP13.63□□□□□ -0.23
HDDC2-209ENST00000609477 ATMQ13315 3056 aa13.62□□□□□ -0.23
HDDC2-209ENST00000609477 A0A096LPK6 155 aa13.62□□□□□ -0.23
HDDC2-209ENST00000609477 TRBC2A0A5B9 178 aa13.62□□□□□ -0.23
HDDC2-209ENST00000609477 NRP2O60462 931 aa13.62□□□□□ -0.23
HDDC2-209ENST00000609477 KERAO60938 352 aa13.62□□□□□ -0.23
HDDC2-209ENST00000609477 KLF7O75840 302 aaPredicted RBP13.62□□□□□ -0.23
HDDC2-209ENST00000609477 CDH1P12830 882 aa13.62□□□□□ -0.23
HDDC2-209ENST00000609477 TFEBP19484 476 aa13.62□□□□□ -0.23
HDDC2-209ENST00000609477 GSTM2P28161 218 aa13.62□□□□□ -0.23
HDDC2-209ENST00000609477 MAGEA12P43365 314 aa13.62□□□□□ -0.23
HDDC2-209ENST00000609477 CCR10P46092 362 aa13.62□□□□□ -0.23
HDDC2-209ENST00000609477 ERV3-1Q14264 604 aa13.62□□□□□ -0.23
HDDC2-209ENST00000609477 SSPNQ14714 243 aa13.62□□□□□ -0.23
HDDC2-209ENST00000609477 OR4D1Q15615 310 aa13.62□□□□□ -0.23
HDDC2-209ENST00000609477 TBR1Q16650 682 aa13.62□□□□□ -0.23
HDDC2-209ENST00000609477 C1orf189Q5VU69 101 aa13.62□□□□□ -0.23
HDDC2-209ENST00000609477 LCN10Q6JVE6 187 aa13.62□□□□□ -0.23
HDDC2-209ENST00000609477 NIPAL1Q6NVV3 410 aa13.62□□□□□ -0.23
HDDC2-209ENST00000609477 C16orf46Q6P387 395 aa13.62□□□□□ -0.23
HDDC2-209ENST00000609477 ADGRD1Q6QNK2 874 aa13.62□□□□□ -0.23
HDDC2-209ENST00000609477 OVCH1Q7RTY7 1134 aa13.62□□□□□ -0.23
HDDC2-209ENST00000609477 SPATA6LQ8N4H0 392 aa13.62□□□□□ -0.23
HDDC2-209ENST00000609477 OR2Y1Q8NGV0 311 aa13.62□□□□□ -0.23
HDDC2-209ENST00000609477 APOBEC4Q8WW27 367 aaKnown RBP13.62□□□□□ -0.23
HDDC2-209ENST00000609477 NEIL2Q969S2 332 aa13.62□□□□□ -0.23
HDDC2-209ENST00000609477 PTERQ96BW5 349 aa13.62□□□□□ -0.23
HDDC2-209ENST00000609477 TM4SF19Q96DZ7 209 aa13.62□□□□□ -0.23
HDDC2-209ENST00000609477 MRRFQ96E11 262 aaKnown RBP13.62□□□□□ -0.23
HDDC2-209ENST00000609477 SEC16BQ96JE7 1060 aa13.62□□□□□ -0.23
HDDC2-209ENST00000609477 CABS1Q96KC9 395 aa13.62□□□□□ -0.23
HDDC2-209ENST00000609477 EHD1Q9H4M9 534 aa13.62□□□□□ -0.23
HDDC2-209ENST00000609477 PPCSQ9HAB8 311 aa13.62□□□□□ -0.23
HDDC2-209ENST00000609477 ZNF304Q9HCX3 659 aa13.62□□□□□ -0.23
HDDC2-209ENST00000609477 IGSF5Q9NSI5 407 aa13.62□□□□□ -0.23
HDDC2-209ENST00000609477 NUDT4Q9NZJ9 180 aa13.62□□□□□ -0.23
HDDC2-209ENST00000609477 CD274Q9NZQ7 290 aa13.62□□□□□ -0.23
HDDC2-209ENST00000609477 PTBP2Q9UKA9 531 aaKnown RBP13.62□□□□□ -0.23
HDDC2-209ENST00000609477 SLC22A14Q9Y267 594 aa13.62□□□□□ -0.23
HDDC2-209ENST00000609477 MRPS18BQ9Y676 258 aaKnown RBP13.62□□□□□ -0.23
HDDC2-209ENST00000609477 POC1B-GALNT4F8VUJ3 575 aa13.61□□□□□ -0.23
HDDC2-209ENST00000609477 STK16O75716 305 aa13.61□□□□□ -0.23
HDDC2-209ENST00000609477 SLU7O95391 586 aaKnown RBP13.61□□□□□ -0.23
HDDC2-209ENST00000609477 IGHEP01854 428 aa13.61□□□□□ -0.23
HDDC2-209ENST00000609477 SNRPAP09012 282 aaKnown RBP13.61□□□□□ -0.23
HDDC2-209ENST00000609477 FAM153BP0C7A2 387 aa13.61□□□□□ -0.23
HDDC2-209ENST00000609477 SLC35G6P0C7Q6 338 aa13.61□□□□□ -0.23
HDDC2-209ENST00000609477 AHRP35869 848 aa13.61□□□□□ -0.23
HDDC2-209ENST00000609477 CYP4F2P78329 520 aa13.61□□□□□ -0.23
HDDC2-209ENST00000609477 CDC16Q13042 620 aa13.61□□□□□ -0.23
HDDC2-209ENST00000609477 PWP1Q13610 501 aa13.61□□□□□ -0.23
HDDC2-209ENST00000609477 BMPR2Q13873 1038 aa13.61□□□□□ -0.23
HDDC2-209ENST00000609477 SLC29A2Q14542 456 aa13.61□□□□□ -0.23
HDDC2-209ENST00000609477 TSNAXIP1Q2TAA8 658 aa13.61□□□□□ -0.23
HDDC2-209ENST00000609477 FAM153CQ494X1 144 aa13.61□□□□□ -0.23
HDDC2-209ENST00000609477 MLIPQ5VWP3 458 aa13.61□□□□□ -0.23
HDDC2-209ENST00000609477 METTL2BQ6P1Q9 378 aaKnown RBP13.61□□□□□ -0.23
HDDC2-209ENST00000609477 NXPE4Q6UWF7 544 aa13.61□□□□□ -0.23
HDDC2-209ENST00000609477 LCA5Q86VQ0 697 aa13.61□□□□□ -0.23
HDDC2-209ENST00000609477 RAB43Q86YS6 212 aa13.61□□□□□ -0.23
HDDC2-209ENST00000609477 CENPLQ8N0S6 344 aaPredicted RBP13.61□□□□□ -0.23
HDDC2-209ENST00000609477 ARHGEF39Q8N4T4 335 aa13.61□□□□□ -0.23
HDDC2-209ENST00000609477 MFSD9Q8NBP5 474 aa13.61□□□□□ -0.23
HDDC2-209ENST00000609477 LRRN4CLQ8ND94 238 aa13.61□□□□□ -0.23
HDDC2-209ENST00000609477 ADAMTS17Q8TE56 1095 aa13.61□□□□□ -0.23
HDDC2-209ENST00000609477 DCAKDQ8WVC6 231 aa13.61□□□□□ -0.23
HDDC2-209ENST00000609477 NXNL1Q96CM4 212 aa13.61□□□□□ -0.23
HDDC2-209ENST00000609477 RNF31Q96EP0 1072 aa13.61□□□□□ -0.23
HDDC2-209ENST00000609477 ATOH8Q96SQ7 321 aa13.61□□□□□ -0.23
HDDC2-209ENST00000609477 AIF1LQ9BQI0 150 aa13.61□□□□□ -0.23
HDDC2-209ENST00000609477 DRC3Q9H069 523 aa13.61□□□□□ -0.23
HDDC2-209ENST00000609477 ALG9Q9H6U8 611 aa13.61□□□□□ -0.23
HDDC2-209ENST00000609477 STARD5Q9NSY2 213 aa13.61□□□□□ -0.23
HDDC2-209ENST00000609477 WWOXQ9NZC7 414 aa13.61□□□□□ -0.23
HDDC2-209ENST00000609477 RUVBL1Q9Y265 456 aaKnown RBP13.61□□□□□ -0.23
HDDC2-209ENST00000609477 NCF1BA6NI72 391 aaPredicted RBP13.6□□□□□ -0.23
HDDC2-209ENST00000609477 NCF1CA8MVU1 366 aaPredicted RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms