RNA–Protein interactions for RNA: ENST00000608461.1

HDDC2-206, Transcript of HD domain containing 2, humanhuman

TSL 2

Gene HDDC2, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-206ENST00000608461 CXCR2P25025 360 aa13.63□□□□□ -0.23
HDDC2-206ENST00000608461 SLC6A12P48065 614 aa13.63□□□□□ -0.23
HDDC2-206ENST00000608461 ACAP2Q15057 778 aa13.63□□□□□ -0.23
HDDC2-206ENST00000608461 NDUFA9Q16795 377 aa13.63□□□□□ -0.23
HDDC2-206ENST00000608461 TEX35Q5T0J7 233 aa13.63□□□□□ -0.23
HDDC2-206ENST00000608461 MRPL14Q6P1L8 145 aaKnown RBP13.63□□□□□ -0.23
HDDC2-206ENST00000608461 CMC1Q7Z7K0 106 aa13.63□□□□□ -0.23
HDDC2-206ENST00000608461 CSNK1A1LQ8N752 337 aa13.63□□□□□ -0.23
HDDC2-206ENST00000608461 ENDOVQ8N8Q3 282 aaKnown RBP13.63□□□□□ -0.23
HDDC2-206ENST00000608461 CAMKVQ8NCB2 501 aa13.63□□□□□ -0.23
HDDC2-206ENST00000608461 SLC5A11Q8WWX8 675 aa13.63□□□□□ -0.23
HDDC2-206ENST00000608461 ALKBH8Q96BT7 664 aaKnown RBP13.63□□□□□ -0.23
HDDC2-206ENST00000608461 MTBPQ96DY7 904 aa13.63□□□□□ -0.23
HDDC2-206ENST00000608461 OR4K3Q96R72 315 aa13.63□□□□□ -0.23
HDDC2-206ENST00000608461 CCDC77Q9BR77 488 aa13.63□□□□□ -0.23
HDDC2-206ENST00000608461 ARHGAP9Q9BRR9 750 aa13.63□□□□□ -0.23
HDDC2-206ENST00000608461 PITHD1Q9GZP4 211 aaPredicted RBP13.63□□□□□ -0.23
HDDC2-206ENST00000608461 ADNPQ9H2P0 1102 aa13.63□□□□□ -0.23
HDDC2-206ENST00000608461 PELI2Q9HAT8 420 aa13.63□□□□□ -0.23
HDDC2-206ENST00000608461 GPRC5BQ9NZH0 403 aa13.63□□□□□ -0.23
HDDC2-206ENST00000608461 TUBD1Q9UJT1 453 aa13.63□□□□□ -0.23
HDDC2-206ENST00000608461 NXT1Q9UKK6 140 aaKnown RBP13.63□□□□□ -0.23
HDDC2-206ENST00000608461 RNF112Q9ULX5 631 aa13.63□□□□□ -0.23
HDDC2-206ENST00000608461 MDC1Q14676 2089 aaKnown RBP13.63□□□□□ -0.23
HDDC2-206ENST00000608461 ATMQ13315 3056 aa13.62□□□□□ -0.23
HDDC2-206ENST00000608461 A0A096LPK6 155 aa13.62□□□□□ -0.23
HDDC2-206ENST00000608461 TRBC2A0A5B9 178 aa13.62□□□□□ -0.23
HDDC2-206ENST00000608461 NRP2O60462 931 aa13.62□□□□□ -0.23
HDDC2-206ENST00000608461 KERAO60938 352 aa13.62□□□□□ -0.23
HDDC2-206ENST00000608461 KLF7O75840 302 aaPredicted RBP13.62□□□□□ -0.23
HDDC2-206ENST00000608461 CDH1P12830 882 aa13.62□□□□□ -0.23
HDDC2-206ENST00000608461 TFEBP19484 476 aa13.62□□□□□ -0.23
HDDC2-206ENST00000608461 GSTM2P28161 218 aa13.62□□□□□ -0.23
HDDC2-206ENST00000608461 MAGEA12P43365 314 aa13.62□□□□□ -0.23
HDDC2-206ENST00000608461 CCR10P46092 362 aa13.62□□□□□ -0.23
HDDC2-206ENST00000608461 ERV3-1Q14264 604 aa13.62□□□□□ -0.23
HDDC2-206ENST00000608461 SSPNQ14714 243 aa13.62□□□□□ -0.23
HDDC2-206ENST00000608461 OR4D1Q15615 310 aa13.62□□□□□ -0.23
HDDC2-206ENST00000608461 TBR1Q16650 682 aa13.62□□□□□ -0.23
HDDC2-206ENST00000608461 C1orf189Q5VU69 101 aa13.62□□□□□ -0.23
HDDC2-206ENST00000608461 LCN10Q6JVE6 187 aa13.62□□□□□ -0.23
HDDC2-206ENST00000608461 NIPAL1Q6NVV3 410 aa13.62□□□□□ -0.23
HDDC2-206ENST00000608461 C16orf46Q6P387 395 aa13.62□□□□□ -0.23
HDDC2-206ENST00000608461 ADGRD1Q6QNK2 874 aa13.62□□□□□ -0.23
HDDC2-206ENST00000608461 OVCH1Q7RTY7 1134 aa13.62□□□□□ -0.23
HDDC2-206ENST00000608461 SPATA6LQ8N4H0 392 aa13.62□□□□□ -0.23
HDDC2-206ENST00000608461 OR2Y1Q8NGV0 311 aa13.62□□□□□ -0.23
HDDC2-206ENST00000608461 APOBEC4Q8WW27 367 aaKnown RBP13.62□□□□□ -0.23
HDDC2-206ENST00000608461 NEIL2Q969S2 332 aa13.62□□□□□ -0.23
HDDC2-206ENST00000608461 PTERQ96BW5 349 aa13.62□□□□□ -0.23
HDDC2-206ENST00000608461 TM4SF19Q96DZ7 209 aa13.62□□□□□ -0.23
HDDC2-206ENST00000608461 MRRFQ96E11 262 aaKnown RBP13.62□□□□□ -0.23
HDDC2-206ENST00000608461 SEC16BQ96JE7 1060 aa13.62□□□□□ -0.23
HDDC2-206ENST00000608461 CABS1Q96KC9 395 aa13.62□□□□□ -0.23
HDDC2-206ENST00000608461 EHD1Q9H4M9 534 aa13.62□□□□□ -0.23
HDDC2-206ENST00000608461 PPCSQ9HAB8 311 aa13.62□□□□□ -0.23
HDDC2-206ENST00000608461 ZNF304Q9HCX3 659 aa13.62□□□□□ -0.23
HDDC2-206ENST00000608461 IGSF5Q9NSI5 407 aa13.62□□□□□ -0.23
HDDC2-206ENST00000608461 NUDT4Q9NZJ9 180 aa13.62□□□□□ -0.23
HDDC2-206ENST00000608461 CD274Q9NZQ7 290 aa13.62□□□□□ -0.23
HDDC2-206ENST00000608461 PTBP2Q9UKA9 531 aaKnown RBP13.62□□□□□ -0.23
HDDC2-206ENST00000608461 SLC22A14Q9Y267 594 aa13.62□□□□□ -0.23
HDDC2-206ENST00000608461 MRPS18BQ9Y676 258 aaKnown RBP13.62□□□□□ -0.23
HDDC2-206ENST00000608461 POC1B-GALNT4F8VUJ3 575 aa13.61□□□□□ -0.23
HDDC2-206ENST00000608461 STK16O75716 305 aa13.61□□□□□ -0.23
HDDC2-206ENST00000608461 SLU7O95391 586 aaKnown RBP13.61□□□□□ -0.23
HDDC2-206ENST00000608461 IGHEP01854 428 aa13.61□□□□□ -0.23
HDDC2-206ENST00000608461 SNRPAP09012 282 aaKnown RBP13.61□□□□□ -0.23
HDDC2-206ENST00000608461 FAM153BP0C7A2 387 aa13.61□□□□□ -0.23
HDDC2-206ENST00000608461 SLC35G6P0C7Q6 338 aa13.61□□□□□ -0.23
HDDC2-206ENST00000608461 AHRP35869 848 aa13.61□□□□□ -0.23
HDDC2-206ENST00000608461 CYP4F2P78329 520 aa13.61□□□□□ -0.23
HDDC2-206ENST00000608461 CDC16Q13042 620 aa13.61□□□□□ -0.23
HDDC2-206ENST00000608461 PWP1Q13610 501 aa13.61□□□□□ -0.23
HDDC2-206ENST00000608461 BMPR2Q13873 1038 aa13.61□□□□□ -0.23
HDDC2-206ENST00000608461 SLC29A2Q14542 456 aa13.61□□□□□ -0.23
HDDC2-206ENST00000608461 TSNAXIP1Q2TAA8 658 aa13.61□□□□□ -0.23
HDDC2-206ENST00000608461 FAM153CQ494X1 144 aa13.61□□□□□ -0.23
HDDC2-206ENST00000608461 MLIPQ5VWP3 458 aa13.61□□□□□ -0.23
HDDC2-206ENST00000608461 METTL2BQ6P1Q9 378 aaKnown RBP13.61□□□□□ -0.23
HDDC2-206ENST00000608461 NXPE4Q6UWF7 544 aa13.61□□□□□ -0.23
HDDC2-206ENST00000608461 LCA5Q86VQ0 697 aa13.61□□□□□ -0.23
HDDC2-206ENST00000608461 RAB43Q86YS6 212 aa13.61□□□□□ -0.23
HDDC2-206ENST00000608461 CENPLQ8N0S6 344 aaPredicted RBP13.61□□□□□ -0.23
HDDC2-206ENST00000608461 ARHGEF39Q8N4T4 335 aa13.61□□□□□ -0.23
HDDC2-206ENST00000608461 MFSD9Q8NBP5 474 aa13.61□□□□□ -0.23
HDDC2-206ENST00000608461 LRRN4CLQ8ND94 238 aa13.61□□□□□ -0.23
HDDC2-206ENST00000608461 ADAMTS17Q8TE56 1095 aa13.61□□□□□ -0.23
HDDC2-206ENST00000608461 DCAKDQ8WVC6 231 aa13.61□□□□□ -0.23
HDDC2-206ENST00000608461 NXNL1Q96CM4 212 aa13.61□□□□□ -0.23
HDDC2-206ENST00000608461 RNF31Q96EP0 1072 aa13.61□□□□□ -0.23
HDDC2-206ENST00000608461 ATOH8Q96SQ7 321 aa13.61□□□□□ -0.23
HDDC2-206ENST00000608461 AIF1LQ9BQI0 150 aa13.61□□□□□ -0.23
HDDC2-206ENST00000608461 DRC3Q9H069 523 aa13.61□□□□□ -0.23
HDDC2-206ENST00000608461 ALG9Q9H6U8 611 aa13.61□□□□□ -0.23
HDDC2-206ENST00000608461 STARD5Q9NSY2 213 aa13.61□□□□□ -0.23
HDDC2-206ENST00000608461 WWOXQ9NZC7 414 aa13.61□□□□□ -0.23
HDDC2-206ENST00000608461 RUVBL1Q9Y265 456 aaKnown RBP13.61□□□□□ -0.23
HDDC2-206ENST00000608461 NCF1BA6NI72 391 aaPredicted RBP13.6□□□□□ -0.23
HDDC2-206ENST00000608461 NCF1CA8MVU1 366 aaPredicted RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms