RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 RBBP5Q15291 538 aaKnown RBP20.75■□□□□ 0.91
USP6NL-204ENST00000606752 SPIN4Q56A73 249 aa20.75■□□□□ 0.91
USP6NL-204ENST00000606752 TAF8Q7Z7C8 310 aa20.75■□□□□ 0.91
USP6NL-204ENST00000606752 OR4E2Q8NGC2 313 aa20.75■□□□□ 0.91
USP6NL-204ENST00000606752 ZFPM2Q8WW38 1151 aa20.75■□□□□ 0.91
USP6NL-204ENST00000606752 HSPA12BQ96MM6 686 aa20.75■□□□□ 0.91
USP6NL-204ENST00000606752 RHBGQ9H310 441 aa20.75■□□□□ 0.91
USP6NL-204ENST00000606752 CLMPQ9H6B4 373 aa20.75■□□□□ 0.91
USP6NL-204ENST00000606752 SPAG4Q9NPE6 437 aa20.75■□□□□ 0.91
USP6NL-204ENST00000606752 OR5K4A6NMS3 321 aa20.74■□□□□ 0.91
USP6NL-204ENST00000606752 IL6P05231 212 aa20.74■□□□□ 0.91
USP6NL-204ENST00000606752 JUNDP17535 347 aa20.74■□□□□ 0.91
USP6NL-204ENST00000606752 XRCC1P18887 633 aaPredicted RBP20.74■□□□□ 0.91
USP6NL-204ENST00000606752 TACR1P25103 407 aa20.74■□□□□ 0.91
USP6NL-204ENST00000606752 REEP5Q00765 189 aa20.74■□□□□ 0.91
USP6NL-204ENST00000606752 PAGE3Q5JUK9 113 aa20.74■□□□□ 0.91
USP6NL-204ENST00000606752 MINDY1Q8N5J2 469 aa20.74■□□□□ 0.91
USP6NL-204ENST00000606752 KRTCAP2Q8N6L1 136 aa20.74■□□□□ 0.91
USP6NL-204ENST00000606752 CLHC1Q8NHS4 586 aa20.74■□□□□ 0.91
USP6NL-204ENST00000606752 TSSK3Q96PN8 268 aa20.74■□□□□ 0.91
USP6NL-204ENST00000606752 ADA2Q9NZK5 511 aa20.74■□□□□ 0.91
USP6NL-204ENST00000606752 DLGAP2Q9P1A6 1054 aa20.74■□□□□ 0.91
USP6NL-204ENST00000606752 TLR4O00206 839 aa20.74■□□□□ 0.91
USP6NL-204ENST00000606752 SH3BGRLO75368 114 aa20.74■□□□□ 0.91
USP6NL-204ENST00000606752 SORBS2O94875 1100 aaKnown RBP20.74■□□□□ 0.91
USP6NL-204ENST00000606752 TGFB1P01137 390 aa20.74■□□□□ 0.91
USP6NL-204ENST00000606752 NPPAP01160 153 aa20.74■□□□□ 0.91
USP6NL-204ENST00000606752 PTX3P26022 381 aaPredicted RBP20.74■□□□□ 0.91
USP6NL-204ENST00000606752 DGKQP52824 942 aa20.74■□□□□ 0.91
USP6NL-204ENST00000606752 CLNS1AP54105 237 aaKnown RBP20.74■□□□□ 0.91
USP6NL-204ENST00000606752 ACTR3P61158 418 aa20.74■□□□□ 0.91
USP6NL-204ENST00000606752 CSNK1G2P78368 415 aa20.74■□□□□ 0.91
USP6NL-204ENST00000606752 CEACAM7Q14002 265 aa20.74■□□□□ 0.91
USP6NL-204ENST00000606752 ZNF423Q2M1K9 1284 aa20.74■□□□□ 0.91
USP6NL-204ENST00000606752 RIPOR1Q6ZS17 1223 aa20.74■□□□□ 0.91
USP6NL-204ENST00000606752 TRIM48Q8IWZ4 208 aa20.74■□□□□ 0.91
USP6NL-204ENST00000606752 C1orf52Q8N6N3 182 aaKnown RBP20.74■□□□□ 0.91
USP6NL-204ENST00000606752 NUDT8Q8WV74 236 aa20.74■□□□□ 0.91
USP6NL-204ENST00000606752 JPH3Q8WXH2 748 aaPredicted RBP20.74■□□□□ 0.91
USP6NL-204ENST00000606752 LRRC58Q96CX6 371 aa20.74■□□□□ 0.91
USP6NL-204ENST00000606752 GPATCH1Q9BRR8 931 aaKnown RBP20.74■□□□□ 0.91
USP6NL-204ENST00000606752 MIR1-1HGQ9H1L0 117 aa20.74■□□□□ 0.91
USP6NL-204ENST00000606752 SRMSQ9H3Y6 488 aa20.74■□□□□ 0.91
USP6NL-204ENST00000606752 IL1RL2Q9HB29 575 aa20.74■□□□□ 0.91
USP6NL-204ENST00000606752 MRPS30Q9NP92 439 aaKnown RBP20.74■□□□□ 0.91
USP6NL-204ENST00000606752 SIRT5Q9NXA8 310 aa20.74■□□□□ 0.91
USP6NL-204ENST00000606752 SPHK1Q9NYA1 384 aa20.74■□□□□ 0.91
USP6NL-204ENST00000606752 APOBEC3BQ9UH17 382 aaKnown RBP20.74■□□□□ 0.91
USP6NL-204ENST00000606752 POMPQ9Y244 141 aa20.74■□□□□ 0.91
USP6NL-204ENST00000606752 LRP4O75096 1905 aa20.73■□□□□ 0.91
USP6NL-204ENST00000606752 KIR2DS5A0A0G2JLQ3 304 aa20.73■□□□□ 0.91
USP6NL-204ENST00000606752 A0A0G2JNG1 304 aa20.73■□□□□ 0.91
USP6NL-204ENST00000606752 ANKDD1BA6NHY2 528 aa20.73■□□□□ 0.91
USP6NL-204ENST00000606752 KIR2DS3K7RE56 304 aa20.73■□□□□ 0.91
USP6NL-204ENST00000606752 VIPP01282 170 aa20.73■□□□□ 0.91
USP6NL-204ENST00000606752 CELA2BP08218 269 aaPredicted RBP20.73■□□□□ 0.91
USP6NL-204ENST00000606752 CHRM5P08912 532 aaPredicted RBP20.73■□□□□ 0.91
USP6NL-204ENST00000606752 BCKDHBP21953 392 aa20.73■□□□□ 0.91
USP6NL-204ENST00000606752 SERPINB1P30740 379 aa20.73■□□□□ 0.91
USP6NL-204ENST00000606752 FOXM1Q08050 763 aa20.73■□□□□ 0.91
USP6NL-204ENST00000606752 NFYCQ13952 458 aa20.73■□□□□ 0.91
USP6NL-204ENST00000606752 KIR2DS5Q14953 304 aa20.73■□□□□ 0.91
USP6NL-204ENST00000606752 SNCBQ16143 134 aa20.73■□□□□ 0.91
USP6NL-204ENST00000606752 FAM174BQ3ZCQ3 159 aa20.73■□□□□ 0.91
USP6NL-204ENST00000606752 PRRT3Q5FWE3 981 aa20.73■□□□□ 0.91
USP6NL-204ENST00000606752 PRMT9Q6P2P2 845 aa20.73■□□□□ 0.91
USP6NL-204ENST00000606752 VN1R5Q7Z5H4 357 aa20.73■□□□□ 0.91
USP6NL-204ENST00000606752 DPP10Q8N608 796 aa20.73■□□□□ 0.91
USP6NL-204ENST00000606752 CCDC124Q96CT7 223 aaKnown RBP20.73■□□□□ 0.91
USP6NL-204ENST00000606752 EBPLQ9BY08 206 aa20.73■□□□□ 0.91
USP6NL-204ENST00000606752 TM9SF3Q9HD45 589 aa20.73■□□□□ 0.91
USP6NL-204ENST00000606752 TMEM181Q9P2C4 612 aa20.73■□□□□ 0.91
USP6NL-204ENST00000606752 PACSIN3Q9UKS6 424 aa20.73■□□□□ 0.91
USP6NL-204ENST00000606752 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa20.72■□□□□ 0.91
USP6NL-204ENST00000606752 IGKV1-8A0A0C4DH67 115 aa20.72■□□□□ 0.91
USP6NL-204ENST00000606752 FXYD1O00168 92 aa20.72■□□□□ 0.91
USP6NL-204ENST00000606752 CCNDBP1O95273 360 aa20.72■□□□□ 0.91
USP6NL-204ENST00000606752 CSF2P04141 144 aa20.72■□□□□ 0.91
USP6NL-204ENST00000606752 PEBP1P30086 187 aaKnown RBP20.72■□□□□ 0.91
USP6NL-204ENST00000606752 HOXA6P31267 233 aa20.72■□□□□ 0.91
USP6NL-204ENST00000606752 RAE1P78406 368 aaKnown RBP20.72■□□□□ 0.91
USP6NL-204ENST00000606752 C1orf61Q13536 156 aa20.72■□□□□ 0.91
USP6NL-204ENST00000606752 SF1Q15637 639 aaKnown RBP20.72■□□□□ 0.91
USP6NL-204ENST00000606752 GALNT18Q6P9A2 607 aa20.72■□□□□ 0.91
USP6NL-204ENST00000606752 SYT12Q8IV01 421 aa20.72■□□□□ 0.91
USP6NL-204ENST00000606752 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP20.72■□□□□ 0.911e-11■■■■■ 79.6
USP6NL-204ENST00000606752 TMEFF1Q8IYR6 380 aa20.72■□□□□ 0.91
USP6NL-204ENST00000606752 OR2L3Q8NG85 312 aa20.72■□□□□ 0.91
USP6NL-204ENST00000606752 C1orf216Q8TAB5 229 aa20.72■□□□□ 0.91
USP6NL-204ENST00000606752 EGLN2Q96KS0 407 aa20.72■□□□□ 0.91
USP6NL-204ENST00000606752 SLC39A3Q9BRY0 314 aa20.72■□□□□ 0.91
USP6NL-204ENST00000606752 OR51B5Q9H339 312 aa20.72■□□□□ 0.91
USP6NL-204ENST00000606752 POT1Q9NUX5 634 aa20.72■□□□□ 0.91
USP6NL-204ENST00000606752 CPNE7Q9UBL6 633 aa20.72■□□□□ 0.91
USP6NL-204ENST00000606752 PRMT3O60678 531 aa20.71■□□□□ 0.91
USP6NL-204ENST00000606752 PGRP06401 933 aa20.71■□□□□ 0.91
USP6NL-204ENST00000606752 PRPS1L1P21108 318 aa20.71■□□□□ 0.91
USP6NL-204ENST00000606752 ME2P23368 584 aa20.71■□□□□ 0.91
USP6NL-204ENST00000606752 DMWDQ09019 674 aa20.71■□□□□ 0.91
USP6NL-204ENST00000606752 SPANXN4Q5MJ08 99 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms