RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 ELF4Q99607 663 aaPredicted RBP17.29■□□□□ 0.36
VRK3-225ENST00000601912 BTBD10Q9BSF8 475 aa17.29■□□□□ 0.36
VRK3-225ENST00000601912 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.29■□□□□ 0.36
VRK3-225ENST00000601912 DMRT3Q9NQL9 472 aa17.29■□□□□ 0.36
VRK3-225ENST00000601912 ZIM2Q9NZV7 527 aa17.29■□□□□ 0.36
VRK3-225ENST00000601912 RRP15Q9Y3B9 282 aaKnown RBP17.29■□□□□ 0.36
VRK3-225ENST00000601912 CSNK1G3Q9Y6M4 447 aa17.29■□□□□ 0.36
VRK3-225ENST00000601912 GSAPA4D1B5 854 aa17.29■□□□□ 0.36
VRK3-225ENST00000601912 C2orf74A8MZ97 194 aa17.29■□□□□ 0.36
VRK3-225ENST00000601912 GYG2O15488 501 aa17.29■□□□□ 0.36
VRK3-225ENST00000601912 SLC22A3O75751 556 aa17.29■□□□□ 0.36
VRK3-225ENST00000601912 MYO1DO94832 1006 aa17.29■□□□□ 0.36
VRK3-225ENST00000601912 SNRPB2P08579 225 aaKnown RBP17.29■□□□□ 0.36
VRK3-225ENST00000601912 G6PDP11413 515 aa17.29■□□□□ 0.36
VRK3-225ENST00000601912 ACPPP15309 386 aa17.29■□□□□ 0.36
VRK3-225ENST00000601912 POLR2CP19387 275 aaPredicted RBP17.29■□□□□ 0.36
VRK3-225ENST00000601912 HOXD12P35452 270 aa17.29■□□□□ 0.36
VRK3-225ENST00000601912 RXRGP48443 463 aa17.29■□□□□ 0.36
VRK3-225ENST00000601912 MAZP56270 477 aaKnown RBP17.29■□□□□ 0.36
VRK3-225ENST00000601912 ACSM2AQ08AH3 577 aa17.29■□□□□ 0.36
VRK3-225ENST00000601912 STX5Q13190 355 aa17.29■□□□□ 0.36
VRK3-225ENST00000601912 ACSM2BQ68CK6 577 aa17.29■□□□□ 0.36
VRK3-225ENST00000601912 CYP20A1Q6UW02 462 aa17.29■□□□□ 0.36
VRK3-225ENST00000601912 TTLQ8NG68 377 aa17.29■□□□□ 0.36
VRK3-225ENST00000601912 APIPQ96GX9 242 aa17.29■□□□□ 0.36
VRK3-225ENST00000601912 SERPINI1Q99574 410 aa17.29■□□□□ 0.36
VRK3-225ENST00000601912 RTKNQ9BST9 563 aa17.29■□□□□ 0.36
VRK3-225ENST00000601912 DPH7Q9BTV6 452 aa17.29■□□□□ 0.36
VRK3-225ENST00000601912 SLC25A23Q9BV35 468 aa17.29■□□□□ 0.36
VRK3-225ENST00000601912 RHBGQ9H310 441 aa17.29■□□□□ 0.36
VRK3-225ENST00000601912 ACTR10Q9NZ32 417 aa17.29■□□□□ 0.36
VRK3-225ENST00000601912 PPT2Q9UMR5 302 aa17.29■□□□□ 0.36
VRK3-225ENST00000601912 IGKV1-8A0A0C4DH67 115 aa17.28■□□□□ 0.36
VRK3-225ENST00000601912 TRBC2A0A5B9 178 aa17.28■□□□□ 0.36
VRK3-225ENST00000601912 CFAP73A6NFT4 308 aa17.28■□□□□ 0.36
VRK3-225ENST00000601912 OR1F1O43749 312 aa17.28■□□□□ 0.36
VRK3-225ENST00000601912 FKBP9O95302 570 aa17.28■□□□□ 0.36
VRK3-225ENST00000601912 SP9P0CG40 484 aa17.28■□□□□ 0.36
VRK3-225ENST00000601912 PRPS2P11908 318 aa17.28■□□□□ 0.36
VRK3-225ENST00000601912 AMD1P17707 334 aa17.28■□□□□ 0.36
VRK3-225ENST00000601912 PTX3P26022 381 aaPredicted RBP17.28■□□□□ 0.36
VRK3-225ENST00000601912 SIM2Q14190 667 aaPredicted RBP17.28■□□□□ 0.36
VRK3-225ENST00000601912 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.28■□□□□ 0.36
VRK3-225ENST00000601912 ADNP2Q6IQ32 1131 aa17.28■□□□□ 0.36
VRK3-225ENST00000601912 ARMC6Q6NXE6 501 aa17.28■□□□□ 0.36
VRK3-225ENST00000601912 KLHL35Q6PF15 583 aa17.28■□□□□ 0.36
VRK3-225ENST00000601912 OGFOD3Q6PK18 319 aa17.28■□□□□ 0.36
VRK3-225ENST00000601912 RINLQ6ZS11 566 aa17.28■□□□□ 0.36
VRK3-225ENST00000601912 GK5Q6ZS86 529 aa17.28■□□□□ 0.36
VRK3-225ENST00000601912 OOSP2Q86WS3 158 aa17.28■□□□□ 0.36
VRK3-225ENST00000601912 OR9I1Q8NGQ6 314 aa17.28■□□□□ 0.36
VRK3-225ENST00000601912 APOLD1Q96LR9 279 aa17.28■□□□□ 0.36
VRK3-225ENST00000601912 TWSG1Q9GZX9 223 aa17.28■□□□□ 0.36
VRK3-225ENST00000601912 C1orf21Q9H246 121 aa17.28■□□□□ 0.36
VRK3-225ENST00000601912 UCK1Q9HA47 277 aa17.28■□□□□ 0.36
VRK3-225ENST00000601912 SLC6A20Q9NP91 592 aa17.28■□□□□ 0.36
VRK3-225ENST00000601912 HRASLS2Q9NWW9 162 aa17.28■□□□□ 0.36
VRK3-225ENST00000601912 UCKL1Q9NWZ5 548 aa17.28■□□□□ 0.36
VRK3-225ENST00000601912 TAS2R1Q9NYW7 299 aa17.28■□□□□ 0.36
VRK3-225ENST00000601912 PCDHGA2Q9Y5H1 932 aa17.28■□□□□ 0.36
VRK3-225ENST00000601912 NOBOXO60393 691 aa17.27■□□□□ 0.36
VRK3-225ENST00000601912 CORO7P57737 925 aa17.27■□□□□ 0.36
VRK3-225ENST00000601912 CUL3Q13618 768 aa17.27■□□□□ 0.36
VRK3-225ENST00000601912 ANGPT1Q15389 498 aa17.27■□□□□ 0.36
VRK3-225ENST00000601912 DUOXA1Q1HG43 343 aa17.27■□□□□ 0.36
VRK3-225ENST00000601912 MMEL1Q495T6 779 aa17.27■□□□□ 0.36
VRK3-225ENST00000601912 SPIN4Q56A73 249 aa17.27■□□□□ 0.36
VRK3-225ENST00000601912 PEAR1Q5VY43 1037 aaPredicted RBP17.27■□□□□ 0.36
VRK3-225ENST00000601912 KIAA1614Q5VZ46 1190 aa17.27■□□□□ 0.36
VRK3-225ENST00000601912 FAM20CQ8IXL6 584 aa17.27■□□□□ 0.36
VRK3-225ENST00000601912 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.27■□□□□ 0.36
VRK3-225ENST00000601912 LIX1Q8N485 282 aa17.27■□□□□ 0.36
VRK3-225ENST00000601912 KIF2BQ8N4N8 673 aa17.27■□□□□ 0.36
VRK3-225ENST00000601912 ZBTB44Q8NCP5 570 aa17.27■□□□□ 0.36
VRK3-225ENST00000601912 CEP76Q8TAP6 659 aa17.27■□□□□ 0.36
VRK3-225ENST00000601912 OR2A14Q96R47 310 aa17.27■□□□□ 0.36
VRK3-225ENST00000601912 EFCAB1Q9HAE3 211 aa17.27■□□□□ 0.36
VRK3-225ENST00000601912 RUVBL1Q9Y265 456 aaKnown RBP17.27■□□□□ 0.36
VRK3-225ENST00000601912 FEZF1A0PJY2 475 aa17.26■□□□□ 0.35
VRK3-225ENST00000601912 TGFB1P01137 390 aa17.26■□□□□ 0.35
VRK3-225ENST00000601912 BCKDHAP12694 445 aa17.26■□□□□ 0.35
VRK3-225ENST00000601912 UGT2B7P16662 529 aa17.26■□□□□ 0.35
VRK3-225ENST00000601912 GSTM2P28161 218 aa17.26■□□□□ 0.35
VRK3-225ENST00000601912 KCNK10P57789 538 aa17.26■□□□□ 0.35
VRK3-225ENST00000601912 UFM1P61960 85 aa17.26■□□□□ 0.35
VRK3-225ENST00000601912 BNC1Q01954 994 aa17.26■□□□□ 0.35
VRK3-225ENST00000601912 ZNF423Q2M1K9 1284 aa17.26■□□□□ 0.35
VRK3-225ENST00000601912 DNAL1Q4LDG9 190 aa17.26■□□□□ 0.35
VRK3-225ENST00000601912 C14orf28Q4W4Y0 310 aa17.26■□□□□ 0.35
VRK3-225ENST00000601912 NOXRED1Q6NXP6 359 aa17.26■□□□□ 0.35
VRK3-225ENST00000601912 C17orf82Q86X59 251 aaPredicted RBP17.26■□□□□ 0.35
VRK3-225ENST00000601912 ZNF761Q86XN6 746 aaPredicted RBP17.26■□□□□ 0.35
VRK3-225ENST00000601912 FUNDC1Q8IVP5 155 aa17.26■□□□□ 0.35
VRK3-225ENST00000601912 RBM15BQ8NDT2 890 aaKnown RBP17.26■□□□□ 0.35
VRK3-225ENST00000601912 TSPEARQ8WU66 669 aa17.26■□□□□ 0.35
VRK3-225ENST00000601912 ZBTB18Q99592 522 aa17.26■□□□□ 0.35
VRK3-225ENST00000601912 SLC38A3Q99624 504 aa17.26■□□□□ 0.35
VRK3-225ENST00000601912 MRPL1Q9BYD6 325 aaKnown RBP17.26■□□□□ 0.35
VRK3-225ENST00000601912 TNRC6BQ9UPQ9 1833 aaKnown RBP17.26■□□□□ 0.35
VRK3-225ENST00000601912 MUC3AQ02505 3323 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms