RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 OCIAD1Q9NX40 245 aa18.08■□□□□ 0.48
CCDC9-205ENST00000600117 ANKMY1Q9P2S6 941 aa18.08■□□□□ 0.48
CCDC9-205ENST00000600117 COPG2Q9UBF2 871 aa18.08■□□□□ 0.48
CCDC9-205ENST00000600117 OPTCQ9UBM4 332 aa18.08■□□□□ 0.48
CCDC9-205ENST00000600117 TNPO3Q9Y5L0 923 aaKnown RBP18.08■□□□□ 0.48
CCDC9-205ENST00000600117 KCNE2Q9Y6J6 123 aa18.08■□□□□ 0.48
CCDC9-205ENST00000600117 E2F3O00716 465 aa18.07■□□□□ 0.48
CCDC9-205ENST00000600117 DYNC1I1O14576 645 aa18.07■□□□□ 0.48
CCDC9-205ENST00000600117 CTSVO60911 334 aa18.07■□□□□ 0.48
CCDC9-205ENST00000600117 CPA3P15088 417 aa18.07■□□□□ 0.48
CCDC9-205ENST00000600117 FOLR1P15328 257 aa18.07■□□□□ 0.48
CCDC9-205ENST00000600117 SH3BP2P78314 561 aa18.07■□□□□ 0.48
CCDC9-205ENST00000600117 CSNK1G2P78368 415 aa18.07■□□□□ 0.48
CCDC9-205ENST00000600117 KCNAB1Q14722 419 aa18.07■□□□□ 0.48
CCDC9-205ENST00000600117 NAA25Q14CX7 972 aa18.07■□□□□ 0.48
CCDC9-205ENST00000600117 PDK4Q16654 411 aa18.07■□□□□ 0.48
CCDC9-205ENST00000600117 CATSPEREQ5SY80 951 aa18.07■□□□□ 0.48
CCDC9-205ENST00000600117 SLC22A9Q8IVM8 553 aa18.07■□□□□ 0.48
CCDC9-205ENST00000600117 DNAJC22Q8N4W6 341 aa18.07■□□□□ 0.48
CCDC9-205ENST00000600117 SNX31Q8N9S9 440 aa18.07■□□□□ 0.48
CCDC9-205ENST00000600117 CCDC63Q8NA47 563 aa18.07■□□□□ 0.48
CCDC9-205ENST00000600117 TCTN2Q96GX1 697 aa18.07■□□□□ 0.48
CCDC9-205ENST00000600117 TMEM237Q96Q45 408 aa18.07■□□□□ 0.48
CCDC9-205ENST00000600117 CMKLR1Q99788 373 aa18.07■□□□□ 0.48
CCDC9-205ENST00000600117 ASCL3Q9NQ33 180 aa18.07■□□□□ 0.48
CCDC9-205ENST00000600117 THSD1Q9NS62 852 aa18.07■□□□□ 0.48
CCDC9-205ENST00000600117 TMEM184CQ9NVA4 438 aa18.07■□□□□ 0.48
CCDC9-205ENST00000600117 SOHLH2Q9NX45 425 aa18.07■□□□□ 0.48
CCDC9-205ENST00000600117 GPRC5BQ9NZH0 403 aa18.07■□□□□ 0.48
CCDC9-205ENST00000600117 MID2Q9UJV3 735 aa18.07■□□□□ 0.48
CCDC9-205ENST00000600117 PILRAQ9UKJ1 303 aa18.07■□□□□ 0.48
CCDC9-205ENST00000600117 PCTPQ9UKL6 214 aa18.07■□□□□ 0.48
CCDC9-205ENST00000600117 SNX7Q9UNH6 387 aa18.07■□□□□ 0.48
CCDC9-205ENST00000600117 DYRK1BQ9Y463 629 aa18.07■□□□□ 0.48
CCDC9-205ENST00000600117 LOXL2Q9Y4K0 774 aa18.07■□□□□ 0.48
CCDC9-205ENST00000600117 EFCAB7A8K855 629 aa18.06■□□□□ 0.48
CCDC9-205ENST00000600117 E7EQ34 232 aa18.06■□□□□ 0.48
CCDC9-205ENST00000600117 H7BY64 318 aa18.06■□□□□ 0.48
CCDC9-205ENST00000600117 TM9SF1O15321 606 aa18.06■□□□□ 0.48
CCDC9-205ENST00000600117 HCRTR1O43613 425 aa18.06■□□□□ 0.48
CCDC9-205ENST00000600117 EBLN1P0CF75 366 aa18.06■□□□□ 0.48
CCDC9-205ENST00000600117 CCL4P13236 92 aa18.06■□□□□ 0.48
CCDC9-205ENST00000600117 HRH2P25021 359 aa18.06■□□□□ 0.48
CCDC9-205ENST00000600117 MLLT3P42568 568 aaPredicted RBP18.06■□□□□ 0.48
CCDC9-205ENST00000600117 HERVK_113P63132 956 aa18.06■□□□□ 0.48
CCDC9-205ENST00000600117 PCDH1Q08174 1060 aa18.06■□□□□ 0.48
CCDC9-205ENST00000600117 EIF3IQ13347 325 aaKnown RBP18.06■□□□□ 0.48
CCDC9-205ENST00000600117 UNC50Q53HI1 259 aa18.06■□□□□ 0.48
CCDC9-205ENST00000600117 ZNF678Q5SXM1 525 aa18.06■□□□□ 0.48
CCDC9-205ENST00000600117 SLCO4C1Q6ZQN7 724 aa18.06■□□□□ 0.48
CCDC9-205ENST00000600117 RNF44Q7L0R7 432 aa18.06■□□□□ 0.48
CCDC9-205ENST00000600117 RAB11FIP2Q7L804 512 aa18.06■□□□□ 0.48
CCDC9-205ENST00000600117 GOLGA7Q7Z5G4 137 aa18.06■□□□□ 0.48
CCDC9-205ENST00000600117 TEX9Q8N6V9 391 aa18.06■□□□□ 0.48
CCDC9-205ENST00000600117 OR4K1Q8NGD4 311 aa18.06■□□□□ 0.48
CCDC9-205ENST00000600117 WDR36Q8NI36 951 aaKnown RBP18.06■□□□□ 0.48
CCDC9-205ENST00000600117 ZNF483Q8TF39 744 aaPredicted RBP18.06■□□□□ 0.48
CCDC9-205ENST00000600117 CCDC126Q96EE4 140 aa18.06■□□□□ 0.48
CCDC9-205ENST00000600117 L3HYPDHQ96EM0 354 aa18.06■□□□□ 0.48
CCDC9-205ENST00000600117 PRR11Q96HE9 360 aaPredicted RBP18.06■□□□□ 0.48
CCDC9-205ENST00000600117 PRAP1Q96NZ9 151 aa18.06■□□□□ 0.48
CCDC9-205ENST00000600117 NSUN5Q96P11 429 aaKnown RBP18.06■□□□□ 0.48
CCDC9-205ENST00000600117 ERVK-6Q9BXR3 956 aa18.06■□□□□ 0.48
CCDC9-205ENST00000600117 ACBD3Q9H3P7 528 aa18.06■□□□□ 0.48
CCDC9-205ENST00000600117 ZBTB26Q9HCK0 441 aa18.06■□□□□ 0.48
CCDC9-205ENST00000600117 PDE7BQ9NP56 450 aa18.06■□□□□ 0.48
CCDC9-205ENST00000600117 KCNK9Q9NPC2 374 aa18.06■□□□□ 0.48
CCDC9-205ENST00000600117 OXSMQ9NWU1 459 aa18.06■□□□□ 0.48
CCDC9-205ENST00000600117 SPTAN1Q13813 2472 aaKnown RBP18.05■□□□□ 0.48
CCDC9-205ENST00000600117 TMEM120BA0PK00 339 aa18.05■□□□□ 0.48
CCDC9-205ENST00000600117 B4E171 279 aa18.05■□□□□ 0.48
CCDC9-205ENST00000600117 K7ENP7 123 aa18.05■□□□□ 0.48
CCDC9-205ENST00000600117 ATP8B1O43520 1251 aa18.05■□□□□ 0.48
CCDC9-205ENST00000600117 MSL3P1P0C860 447 aa18.05■□□□□ 0.48
CCDC9-205ENST00000600117 DHRS4L1P0CG22 281 aa18.05■□□□□ 0.48
CCDC9-205ENST00000600117 FGF3P11487 239 aaPredicted RBP18.05■□□□□ 0.48
CCDC9-205ENST00000600117 HGFP14210 728 aa18.05■□□□□ 0.48
CCDC9-205ENST00000600117 GNAZP19086 355 aa18.05■□□□□ 0.48
CCDC9-205ENST00000600117 IMPDH1P20839 514 aa18.05■□□□□ 0.48
CCDC9-205ENST00000600117 ETV5P41161 510 aa18.05■□□□□ 0.48
CCDC9-205ENST00000600117 TSPAN7P41732 249 aa18.05■□□□□ 0.48
CCDC9-205ENST00000600117 ARL4DP49703 201 aa18.05■□□□□ 0.48
CCDC9-205ENST00000600117 DNAJB13P59910 316 aa18.05■□□□□ 0.48
CCDC9-205ENST00000600117 GTF2H2Q13888 395 aa18.05■□□□□ 0.48
CCDC9-205ENST00000600117 E2F2Q14209 437 aa18.05■□□□□ 0.48
CCDC9-205ENST00000600117 GTF2H2CQ6P1K8 395 aa18.05■□□□□ 0.48
CCDC9-205ENST00000600117 FBXO42Q6P3S6 717 aa18.05■□□□□ 0.48
CCDC9-205ENST00000600117 INO80CQ6PI98 192 aaPredicted RBP18.05■□□□□ 0.48
CCDC9-205ENST00000600117 IGF2-ASQ6U949 168 aa18.05■□□□□ 0.48
CCDC9-205ENST00000600117 NXPE4Q6UWF7 544 aa18.05■□□□□ 0.48
CCDC9-205ENST00000600117 RPS27LQ71UM5 84 aaKnown RBP18.05■□□□□ 0.48
CCDC9-205ENST00000600117 PRICKLE2Q7Z3G6 844 aa18.05■□□□□ 0.48
CCDC9-205ENST00000600117 TMPRSS11BQ86T26 416 aa18.05■□□□□ 0.48
CCDC9-205ENST00000600117 FAM129CQ86XR2 697 aa18.05■□□□□ 0.48
CCDC9-205ENST00000600117 C10orf107Q8IVU9 208 aa18.05■□□□□ 0.48
CCDC9-205ENST00000600117 GOLGA6L1Q8N7Z2 621 aa18.05■□□□□ 0.48
CCDC9-205ENST00000600117 MOCOSQ96EN8 888 aa18.05■□□□□ 0.48
CCDC9-205ENST00000600117 WDR34Q96EX3 536 aa18.05■□□□□ 0.48
CCDC9-205ENST00000600117 CAPS2Q9BXY5 557 aa18.05■□□□□ 0.48
CCDC9-205ENST00000600117 SPNS1Q9H2V7 528 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms