RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 SYF2O95926 243 aaKnown RBP17.84■□□□□ 0.45
PNKP-213ENST00000599543 RNF224P0DH78 156 aa17.84■□□□□ 0.45
PNKP-213ENST00000599543 SLC1A2P43004 574 aa17.84■□□□□ 0.45
PNKP-213ENST00000599543 CUL1Q13616 776 aa17.84■□□□□ 0.45
PNKP-213ENST00000599543 PRTGQ2VWP7 1150 aa17.84■□□□□ 0.45
PNKP-213ENST00000599543 ICE2Q659A1 982 aa17.84■□□□□ 0.45
PNKP-213ENST00000599543 FBXO42Q6P3S6 717 aa17.84■□□□□ 0.45
PNKP-213ENST00000599543 NEK10Q6ZWH5 1172 aa17.84■□□□□ 0.45
PNKP-213ENST00000599543 ZBED8Q8IZ13 594 aa17.84■□□□□ 0.45
PNKP-213ENST00000599543 CSNK1A1LQ8N752 337 aa17.84■□□□□ 0.45
PNKP-213ENST00000599543 BBOF1Q8ND07 529 aa17.84■□□□□ 0.45
PNKP-213ENST00000599543 FBXO25Q8TCJ0 367 aa17.84■□□□□ 0.45
PNKP-213ENST00000599543 KCNJ9Q92806 393 aa17.84■□□□□ 0.45
PNKP-213ENST00000599543 RERGQ96A58 199 aaPredicted RBP17.84■□□□□ 0.45
PNKP-213ENST00000599543 CNDP1Q96KN2 507 aa17.84■□□□□ 0.45
PNKP-213ENST00000599543 NOVA2Q9UNW9 492 aaKnown RBP17.84■□□□□ 0.45
PNKP-213ENST00000599543 CSAG2Q9Y5P2 127 aa17.84■□□□□ 0.45
PNKP-213ENST00000599543 DIDO1Q9BTC0 2240 aaKnown RBP17.83■□□□□ 0.45
PNKP-213ENST00000599543 IGKV1-8A0A0C4DH67 115 aa17.83■□□□□ 0.44
PNKP-213ENST00000599543 PIAS1O75925 651 aa17.83■□□□□ 0.44
PNKP-213ENST00000599543 HPP00738 406 aa17.83■□□□□ 0.44
PNKP-213ENST00000599543 EZRP15311 586 aaKnown RBP17.83■□□□□ 0.44
PNKP-213ENST00000599543 EMP3P54852 163 aa17.83■□□□□ 0.44
PNKP-213ENST00000599543 PRDX1Q06830 199 aaKnown RBP17.83■□□□□ 0.44
PNKP-213ENST00000599543 DSG2Q14126 1118 aa17.83■□□□□ 0.44
PNKP-213ENST00000599543 VWA2Q5GFL6 755 aa17.83■□□□□ 0.44
PNKP-213ENST00000599543 SPANXN3Q5MJ09 141 aa17.83■□□□□ 0.44
PNKP-213ENST00000599543 IGFL2Q6UWQ7 119 aa17.83■□□□□ 0.44
PNKP-213ENST00000599543 ADCK2Q7Z695 626 aa17.83■□□□□ 0.44
PNKP-213ENST00000599543 PAQR7Q86WK9 346 aa17.83■□□□□ 0.44
PNKP-213ENST00000599543 PPFIBP2Q8ND30 876 aa17.83■□□□□ 0.44
PNKP-213ENST00000599543 GIMAP7Q8NHV1 300 aa17.83■□□□□ 0.44
PNKP-213ENST00000599543 DNAJB14Q8TBM8 379 aa17.83■□□□□ 0.44
PNKP-213ENST00000599543 ZNF480Q8WV37 535 aa17.83■□□□□ 0.44
PNKP-213ENST00000599543 MVB12AQ96EY5 273 aa17.83■□□□□ 0.44
PNKP-213ENST00000599543 SLC30A3Q99726 388 aa17.83■□□□□ 0.44
PNKP-213ENST00000599543 YIPF2Q9BWQ6 316 aa17.83■□□□□ 0.44
PNKP-213ENST00000599543 ZNF160Q9HCG1 818 aa17.83■□□□□ 0.44
PNKP-213ENST00000599543 PPANQ9NQ55 473 aaKnown RBP17.83■□□□□ 0.44
PNKP-213ENST00000599543 ABCF3Q9NUQ8 709 aa17.83■□□□□ 0.44
PNKP-213ENST00000599543 TRPC4Q9UBN4 977 aa17.83■□□□□ 0.44
PNKP-213ENST00000599543 RUVBL1Q9Y265 456 aaKnown RBP17.83■□□□□ 0.44
PNKP-213ENST00000599543 ZGRF1Q86YA3 2104 aa17.83■□□□□ 0.44
PNKP-213ENST00000599543 IGLV3-12A0A075B6K2 115 aa17.82■□□□□ 0.44
PNKP-213ENST00000599543 A1L4Q6 167 aa17.82■□□□□ 0.44
PNKP-213ENST00000599543 SMAPO00193 183 aa17.82■□□□□ 0.44
PNKP-213ENST00000599543 ANXA5P08758 320 aa17.82■□□□□ 0.44
PNKP-213ENST00000599543 ENO3P13929 434 aaPredicted RBP17.82■□□□□ 0.44
PNKP-213ENST00000599543 Q0VFX4 171 aa17.82■□□□□ 0.44
PNKP-213ENST00000599543 ZNF169Q14929 603 aaPredicted RBP17.82■□□□□ 0.44
PNKP-213ENST00000599543 HKDC1Q2TB90 917 aa17.82■□□□□ 0.44
PNKP-213ENST00000599543 CRB2Q5IJ48 1285 aa17.82■□□□□ 0.44
PNKP-213ENST00000599543 THEMIS2Q5TEJ8 643 aa17.82■□□□□ 0.44
PNKP-213ENST00000599543 HIST2H2BCQ6DN03 193 aa17.82■□□□□ 0.44
PNKP-213ENST00000599543 LMNTD2Q8IXW0 634 aa17.82■□□□□ 0.44
PNKP-213ENST00000599543 FBXO15Q8NCQ5 510 aaPredicted RBP17.82■□□□□ 0.44
PNKP-213ENST00000599543 CALML6Q8TD86 181 aa17.82■□□□□ 0.44
PNKP-213ENST00000599543 ASB11Q8WXH4 323 aa17.82■□□□□ 0.44
PNKP-213ENST00000599543 C8orf44Q96CB5 159 aa17.82■□□□□ 0.44
PNKP-213ENST00000599543 CERS2Q96G23 380 aa17.82■□□□□ 0.44
PNKP-213ENST00000599543 BARD1Q99728 777 aaKnown RBP17.82■□□□□ 0.44
PNKP-213ENST00000599543 MESP1Q9BRJ9 268 aa17.82■□□□□ 0.44
PNKP-213ENST00000599543 C14orf105Q9NVL8 296 aa17.82■□□□□ 0.44
PNKP-213ENST00000599543 KLHL42Q9P2K6 505 aa17.82■□□□□ 0.44
PNKP-213ENST00000599543 FBXO5Q9UKT4 447 aa17.82■□□□□ 0.44
PNKP-213ENST00000599543 NSG1A0A0A6YYJ2 146 aa17.81■□□□□ 0.44
PNKP-213ENST00000599543 E7ENX8 843 aa17.81■□□□□ 0.44
PNKP-213ENST00000599543 E7ESA3 106 aa17.81■□□□□ 0.44
PNKP-213ENST00000599543 TXNDC9O14530 226 aa17.81■□□□□ 0.44
PNKP-213ENST00000599543 ZBTB14O43829 449 aa17.81■□□□□ 0.44
PNKP-213ENST00000599543 HAUS5O94927 633 aa17.81■□□□□ 0.44
PNKP-213ENST00000599543 MPC1LP0DKB6 136 aa17.81■□□□□ 0.44
PNKP-213ENST00000599543 CXCR2P25025 360 aa17.81■□□□□ 0.44
PNKP-213ENST00000599543 ABATP80404 500 aa17.81■□□□□ 0.44
PNKP-213ENST00000599543 TAP2Q03519 686 aa17.81■□□□□ 0.44
PNKP-213ENST00000599543 CDC16Q13042 620 aa17.81■□□□□ 0.44
PNKP-213ENST00000599543 TLR1Q15399 786 aa17.81■□□□□ 0.44
PNKP-213ENST00000599543 GARNL3Q5VVW2 1013 aa17.81■□□□□ 0.44
PNKP-213ENST00000599543 STEAP4Q687X5 459 aa17.81■□□□□ 0.44
PNKP-213ENST00000599543 ZNF425Q6IV72 752 aa17.81■□□□□ 0.44
PNKP-213ENST00000599543 ZNF549Q6P9A3 640 aa17.81■□□□□ 0.44
PNKP-213ENST00000599543 ISLR2Q6UXK2 745 aa17.81■□□□□ 0.44
PNKP-213ENST00000599543 LINC00696Q6ZRV3 163 aa17.81■□□□□ 0.44
PNKP-213ENST00000599543 KBTBD2Q8IY47 623 aa17.81■□□□□ 0.44
PNKP-213ENST00000599543 CEP112Q8N8E3 955 aa17.81■□□□□ 0.44
PNKP-213ENST00000599543 IFT81Q8WYA0 676 aa17.81■□□□□ 0.44
PNKP-213ENST00000599543 MMABQ96EY8 250 aaPredicted RBP17.81■□□□□ 0.44
PNKP-213ENST00000599543 C5orf34Q96MH7 638 aa17.81■□□□□ 0.44
PNKP-213ENST00000599543 OR2A5Q96R48 311 aa17.81■□□□□ 0.44
PNKP-213ENST00000599543 GPR21Q99679 349 aa17.81■□□□□ 0.44
PNKP-213ENST00000599543 DRC3Q9H069 523 aa17.81■□□□□ 0.44
PNKP-213ENST00000599543 ERRFI1Q9UJM3 462 aaPredicted RBP17.81■□□□□ 0.44
PNKP-213ENST00000599543 SLC5A6Q9Y289 635 aa17.81■□□□□ 0.44
PNKP-213ENST00000599543 NTNG1Q9Y2I2 539 aa17.81■□□□□ 0.44
PNKP-213ENST00000599543 MED16Q9Y2X0 877 aa17.81■□□□□ 0.44
PNKP-213ENST00000599543 COMMD10Q9Y6G5 202 aa17.81■□□□□ 0.44
PNKP-213ENST00000599543 IDSB3KWA1 339 aa17.8■□□□□ 0.44
PNKP-213ENST00000599543 FFAR3O14843 346 aa17.8■□□□□ 0.44
PNKP-213ENST00000599543 GPR42O15529 346 aa17.8■□□□□ 0.44
PNKP-213ENST00000599543 TTC4O95801 387 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms