RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 KLHDC8AQ8IYD2 350 aa11.61□□□□□ -0.55
SHKBP1-213ENST00000597325 C2orf73Q8N5S3 287 aaPredicted RBP11.61□□□□□ -0.55
SHKBP1-213ENST00000597325 TEX9Q8N6V9 391 aa11.61□□□□□ -0.55
SHKBP1-213ENST00000597325 OR10G6Q8NH81 332 aa11.61□□□□□ -0.55
SHKBP1-213ENST00000597325 HMGCLL1Q8TB92 370 aa11.61□□□□□ -0.55
SHKBP1-213ENST00000597325 ZNF483Q8TF39 744 aaPredicted RBP11.61□□□□□ -0.55
SHKBP1-213ENST00000597325 ZNF75CPQ92670 426 aaPredicted RBP11.61□□□□□ -0.55
SHKBP1-213ENST00000597325 ATP6V1E2Q96A05 226 aa11.61□□□□□ -0.55
SHKBP1-213ENST00000597325 MIPEPQ99797 713 aa11.61□□□□□ -0.55
SHKBP1-213ENST00000597325 HAUS8Q9BT25 410 aa11.61□□□□□ -0.55
SHKBP1-213ENST00000597325 MENTQ9BUN1 341 aa11.61□□□□□ -0.55
SHKBP1-213ENST00000597325 DRC3Q9H069 523 aa11.61□□□□□ -0.55
SHKBP1-213ENST00000597325 GSTO2Q9H4Y5 243 aa11.61□□□□□ -0.55
SHKBP1-213ENST00000597325 SEMA4BQ9NPR2 832 aaPredicted RBP11.61□□□□□ -0.55
SHKBP1-213ENST00000597325 ACSS2Q9NR19 701 aa11.61□□□□□ -0.55
SHKBP1-213ENST00000597325 ANAPC2Q9UJX6 822 aa11.61□□□□□ -0.55
SHKBP1-213ENST00000597325 ACSL6Q9UKU0 697 aa11.61□□□□□ -0.55
SHKBP1-213ENST00000597325 PADI4Q9UM07 663 aa11.61□□□□□ -0.55
SHKBP1-213ENST00000597325 PCDHGA4Q9Y5G9 962 aa11.61□□□□□ -0.55
SHKBP1-213ENST00000597325 RNF215Q9Y6U7 377 aa11.61□□□□□ -0.55
SHKBP1-213ENST00000597325 TDRD6O60522 2096 aaKnown RBP11.61□□□□□ -0.55
SHKBP1-213ENST00000597325 GSAPA4D1B5 854 aa11.6□□□□□ -0.55
SHKBP1-213ENST00000597325 OR6C74A6NCV1 312 aa11.6□□□□□ -0.55
SHKBP1-213ENST00000597325 ISM1B1AKI9 464 aa11.6□□□□□ -0.55
SHKBP1-213ENST00000597325 MATN2O00339 956 aa11.6□□□□□ -0.55
SHKBP1-213ENST00000597325 CLGNO14967 610 aa11.6□□□□□ -0.55
SHKBP1-213ENST00000597325 CRCPO75575 148 aa11.6□□□□□ -0.55
SHKBP1-213ENST00000597325 TNFSF15O95150 251 aa11.6□□□□□ -0.55
SHKBP1-213ENST00000597325 CCNDBP1O95273 360 aa11.6□□□□□ -0.55
SHKBP1-213ENST00000597325 OTCP00480 354 aa11.6□□□□□ -0.55
SHKBP1-213ENST00000597325 CHRM5P08912 532 aaPredicted RBP11.6□□□□□ -0.55
SHKBP1-213ENST00000597325 GLB1P16278 677 aa11.6□□□□□ -0.55
SHKBP1-213ENST00000597325 AMD1P17707 334 aa11.6□□□□□ -0.55
SHKBP1-213ENST00000597325 CCNG1P51959 295 aa11.6□□□□□ -0.55
SHKBP1-213ENST00000597325 EPHA4P54764 986 aa11.6□□□□□ -0.55
SHKBP1-213ENST00000597325 CLCQ05315 142 aa11.6□□□□□ -0.55
SHKBP1-213ENST00000597325 CDC16Q13042 620 aa11.6□□□□□ -0.55
SHKBP1-213ENST00000597325 FASTKQ14296 549 aaKnown RBP11.6□□□□□ -0.55
SHKBP1-213ENST00000597325 SUSD1Q6UWL2 747 aa11.6□□□□□ -0.55
SHKBP1-213ENST00000597325 LCTLQ6UWM7 567 aa11.6□□□□□ -0.55
SHKBP1-213ENST00000597325 RGS9BPQ6ZS82 235 aa11.6□□□□□ -0.55
SHKBP1-213ENST00000597325 RPS27LQ71UM5 84 aaKnown RBP11.6□□□□□ -0.55
SHKBP1-213ENST00000597325 ZNF761Q86XN6 746 aaPredicted RBP11.6□□□□□ -0.55
SHKBP1-213ENST00000597325 KIRREL3Q8IZU9 778 aa11.6□□□□□ -0.55
SHKBP1-213ENST00000597325 AFAP1L2Q8N4X5 818 aa11.6□□□□□ -0.55
SHKBP1-213ENST00000597325 LINC01555Q8NAE3 123 aa11.6□□□□□ -0.55
SHKBP1-213ENST00000597325 TRPC4APQ8TEL6 797 aa11.6□□□□□ -0.55
SHKBP1-213ENST00000597325 NAT6Q93015 286 aa11.6□□□□□ -0.55
SHKBP1-213ENST00000597325 SLC22A18Q96BI1 424 aa11.6□□□□□ -0.55
SHKBP1-213ENST00000597325 AHCYL2Q96HN2 611 aaKnown RBP11.6□□□□□ -0.55
SHKBP1-213ENST00000597325 APOLD1Q96LR9 279 aa11.6□□□□□ -0.55
SHKBP1-213ENST00000597325 NSUN5Q96P11 429 aaKnown RBP11.6□□□□□ -0.55
SHKBP1-213ENST00000597325 SGPP1Q9BX95 441 aa11.6□□□□□ -0.55
SHKBP1-213ENST00000597325 PITPNM3Q9BZ71 974 aa11.6□□□□□ -0.55
SHKBP1-213ENST00000597325 CCDC134Q9H6E4 229 aa11.6□□□□□ -0.55
SHKBP1-213ENST00000597325 IPPKQ9H8X2 491 aa11.6□□□□□ -0.55
SHKBP1-213ENST00000597325 THAP1Q9NVV9 213 aa11.6□□□□□ -0.55
SHKBP1-213ENST00000597325 GPRC5BQ9NZH0 403 aa11.6□□□□□ -0.55
SHKBP1-213ENST00000597325 LRIT1Q9P2V4 623 aa11.6□□□□□ -0.55
SHKBP1-213ENST00000597325 TAC3Q9UHF0 121 aa11.6□□□□□ -0.55
SHKBP1-213ENST00000597325 SLC22A14Q9Y267 594 aa11.6□□□□□ -0.55
SHKBP1-213ENST00000597325 ASB1Q9Y576 335 aa11.6□□□□□ -0.55
SHKBP1-213ENST00000597325 PCDHB11Q9Y5F2 797 aa11.6□□□□□ -0.55
SHKBP1-213ENST00000597325 KCNE2Q9Y6J6 123 aa11.6□□□□□ -0.55
SHKBP1-213ENST00000597325 PIPSLA2A3N6 862 aa11.59□□□□□ -0.55
SHKBP1-213ENST00000597325 OR5K3A6NET4 321 aa11.59□□□□□ -0.55
SHKBP1-213ENST00000597325 C2orf74A8MZ97 194 aa11.59□□□□□ -0.55
SHKBP1-213ENST00000597325 TCP11X1B4DZS4 312 aa11.59□□□□□ -0.55
SHKBP1-213ENST00000597325 PPM1DO15297 605 aa11.59□□□□□ -0.55
SHKBP1-213ENST00000597325 UBXN7O94888 489 aa11.59□□□□□ -0.55
SHKBP1-213ENST00000597325 VIMP08670 466 aaKnown RBP11.59□□□□□ -0.55
SHKBP1-213ENST00000597325 RNF224P0DH78 156 aa11.59□□□□□ -0.55
SHKBP1-213ENST00000597325 TSPAN8P19075 237 aa11.59□□□□□ -0.55
SHKBP1-213ENST00000597325 GNAZP19086 355 aa11.59□□□□□ -0.55
SHKBP1-213ENST00000597325 WT1P19544 449 aaPredicted RBP11.59□□□□□ -0.55
SHKBP1-213ENST00000597325 GPR3P46089 330 aa11.59□□□□□ -0.55
SHKBP1-213ENST00000597325 CDH13P55290 713 aa11.59□□□□□ -0.55
SHKBP1-213ENST00000597325 PKNOX1P55347 436 aa11.59□□□□□ -0.55
SHKBP1-213ENST00000597325 CYP4F2P78329 520 aa11.59□□□□□ -0.55
SHKBP1-213ENST00000597325 KIR2DS3Q14952 304 aa11.59□□□□□ -0.55
SHKBP1-213ENST00000597325 ARL13AQ5H913 290 aaPredicted RBP11.59□□□□□ -0.55
SHKBP1-213ENST00000597325 ZNF438Q7Z4V0 828 aa11.59□□□□□ -0.55
SHKBP1-213ENST00000597325 C17orf64Q86WR6 236 aa11.59□□□□□ -0.55
SHKBP1-213ENST00000597325 MYLK4Q86YV6 388 aaPredicted RBP11.59□□□□□ -0.55
SHKBP1-213ENST00000597325 CCDC74AQ96AQ1 378 aa11.59□□□□□ -0.55
SHKBP1-213ENST00000597325 MAGEB10Q96LZ2 347 aaPredicted RBP11.59□□□□□ -0.55
SHKBP1-213ENST00000597325 ZNF382Q96SR6 550 aa11.59□□□□□ -0.55
SHKBP1-213ENST00000597325 ACAT2Q9BWD1 397 aa11.59□□□□□ -0.55
SHKBP1-213ENST00000597325 TBC1D10AQ9BXI6 508 aa11.59□□□□□ -0.55
SHKBP1-213ENST00000597325 NSRP1Q9H0G5 558 aaKnown RBP11.59□□□□□ -0.55
SHKBP1-213ENST00000597325 EPB41L1Q9H4G0 881 aa11.59□□□□□ -0.55
SHKBP1-213ENST00000597325 NOL11Q9H8H0 719 aaKnown RBP11.59□□□□□ -0.55
SHKBP1-213ENST00000597325 ACTR8Q9H981 624 aa11.59□□□□□ -0.55
SHKBP1-213ENST00000597325 MID1IP1Q9NPA3 183 aa11.59□□□□□ -0.55
SHKBP1-213ENST00000597325 INTS7Q9NVH2 962 aaKnown RBP11.59□□□□□ -0.55
SHKBP1-213ENST00000597325 NIPBLQ6KC79 2804 aaeCLIP11.59□□□□□ -0.55
SHKBP1-213ENST00000597325 MTORP42345 2549 aa11.58□□□□□ -0.56
SHKBP1-213ENST00000597325 DUX1O43812 170 aa11.58□□□□□ -0.56
SHKBP1-213ENST00000597325 SNNO75324 88 aaPredicted RBP11.58□□□□□ -0.56
SHKBP1-213ENST00000597325 LYPLA1O75608 230 aaPredicted RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms