RNA–Protein interactions for RNA: ENST00000596121.5

VRK3-210, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 983 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-210ENST00000596121 SNX15Q9NRS6 342 aa10.64□□□□□ -0.71
VRK3-210ENST00000596121 TCFL5Q9UL49 500 aa10.64□□□□□ -0.71
VRK3-210ENST00000596121 RUVBL1Q9Y265 456 aaKnown RBP10.64□□□□□ -0.71
VRK3-210ENST00000596121 SLC22A14Q9Y267 594 aa10.64□□□□□ -0.71
VRK3-210ENST00000596121 CFAP46Q8IYW2 2715 aa10.64□□□□□ -0.71
VRK3-210ENST00000596121 KCNE1BA0A087WTH5 132 aa10.63□□□□□ -0.71
VRK3-210ENST00000596121 A0A1B0GX78 115 aa10.63□□□□□ -0.71
VRK3-210ENST00000596121 POC1B-GALNT4F8VUJ3 575 aa10.63□□□□□ -0.71
VRK3-210ENST00000596121 ERVH48-1M5A8F1 160 aa10.63□□□□□ -0.71
VRK3-210ENST00000596121 DSCR3O14972 297 aa10.63□□□□□ -0.71
VRK3-210ENST00000596121 ITGB2P05107 769 aa10.63□□□□□ -0.71
VRK3-210ENST00000596121 ANXA5P08758 320 aa10.63□□□□□ -0.71
VRK3-210ENST00000596121 EZRP15311 586 aaKnown RBP10.63□□□□□ -0.71
VRK3-210ENST00000596121 TFEBP19484 476 aa10.63□□□□□ -0.71
VRK3-210ENST00000596121 CCND1P24385 295 aa10.63□□□□□ -0.71
VRK3-210ENST00000596121 VARSP26640 1264 aaKnown RBP10.63□□□□□ -0.71
VRK3-210ENST00000596121 MAGEA12P43365 314 aa10.63□□□□□ -0.71
VRK3-210ENST00000596121 PMS2P54278 862 aa10.63□□□□□ -0.71
VRK3-210ENST00000596121 ATP6V0D1P61421 351 aa10.63□□□□□ -0.71
VRK3-210ENST00000596121 RPS15P62841 145 aaKnown RBP10.63□□□□□ -0.71
VRK3-210ENST00000596121 NAA25Q14CX7 972 aa10.63□□□□□ -0.71
VRK3-210ENST00000596121 UGT8Q16880 541 aa10.63□□□□□ -0.71
VRK3-210ENST00000596121 CRTC2Q53ET0 693 aaPredicted RBP10.63□□□□□ -0.71
VRK3-210ENST00000596121 RAPH1Q70E73 1250 aa10.63□□□□□ -0.71
VRK3-210ENST00000596121 TRMT10CQ7L0Y3 403 aaKnown RBP10.63□□□□□ -0.71
VRK3-210ENST00000596121 C17orf64Q86WR6 236 aa10.63□□□□□ -0.71
VRK3-210ENST00000596121 GPSM1Q86YR5 675 aa10.63□□□□□ -0.71
VRK3-210ENST00000596121 CSNK1A1LQ8N752 337 aa10.63□□□□□ -0.71
VRK3-210ENST00000596121 ATL1Q8WXF7 558 aa10.63□□□□□ -0.71
VRK3-210ENST00000596121 TM4SF19Q96DZ7 209 aa10.63□□□□□ -0.71
VRK3-210ENST00000596121 MOCOSQ96EN8 888 aa10.63□□□□□ -0.71
VRK3-210ENST00000596121 ATOH8Q96SQ7 321 aa10.63□□□□□ -0.71
VRK3-210ENST00000596121 EGFL8Q99944 293 aa10.63□□□□□ -0.71
VRK3-210ENST00000596121 DPH2Q9BQC3 489 aaPredicted RBP10.63□□□□□ -0.71
VRK3-210ENST00000596121 MESP1Q9BRJ9 268 aa10.63□□□□□ -0.71
VRK3-210ENST00000596121 ALG9Q9H6U8 611 aa10.63□□□□□ -0.71
VRK3-210ENST00000596121 TXLNGQ9NUQ3 528 aa10.63□□□□□ -0.71
VRK3-210ENST00000596121 ZNF358Q9NW07 568 aa10.63□□□□□ -0.71
VRK3-210ENST00000596121 NDOR1Q9UHB4 597 aa10.63□□□□□ -0.71
VRK3-210ENST00000596121 SRPK3Q9UPE1 567 aa10.63□□□□□ -0.71
VRK3-210ENST00000596121 MAU2Q9Y6X3 613 aa10.63□□□□□ -0.71
VRK3-210ENST00000596121 TLN1Q9Y490 2541 aaKnown RBP10.63□□□□□ -0.71
VRK3-210ENST00000596121 A0A087WUV0 522 aaPredicted RBP10.62□□□□□ -0.71
VRK3-210ENST00000596121 A0A096LPK6 155 aa10.62□□□□□ -0.71
VRK3-210ENST00000596121 ESPNB1AK53 854 aa10.62□□□□□ -0.71
VRK3-210ENST00000596121 FFAR3O14843 346 aa10.62□□□□□ -0.71
VRK3-210ENST00000596121 GPR42O15529 346 aa10.62□□□□□ -0.71
VRK3-210ENST00000596121 FOXS1O43638 330 aa10.62□□□□□ -0.71
VRK3-210ENST00000596121 C1QL1O75973 258 aa10.62□□□□□ -0.71
VRK3-210ENST00000596121 RECKO95980 971 aa10.62□□□□□ -0.71
VRK3-210ENST00000596121 UMODP07911 640 aa10.62□□□□□ -0.71
VRK3-210ENST00000596121 ABHD2P08910 425 aa10.62□□□□□ -0.71
VRK3-210ENST00000596121 LTA4HP09960 611 aaKnown RBP10.62□□□□□ -0.71
VRK3-210ENST00000596121 FAM87AP0C7U9 286 aa10.62□□□□□ -0.71
VRK3-210ENST00000596121 MTHFD2P13995 350 aa10.62□□□□□ -0.71
VRK3-210ENST00000596121 EPORP19235 508 aa10.62□□□□□ -0.71
VRK3-210ENST00000596121 AGXTP21549 392 aa10.62□□□□□ -0.71
VRK3-210ENST00000596121 HRH2P25021 359 aa10.62□□□□□ -0.71
VRK3-210ENST00000596121 GGT5P36269 586 aa10.62□□□□□ -0.71
VRK3-210ENST00000596121 GLRBP48167 497 aa10.62□□□□□ -0.71
VRK3-210ENST00000596121 AGTR2P50052 363 aa10.62□□□□□ -0.71
VRK3-210ENST00000596121 CCR8P51685 355 aa10.62□□□□□ -0.71
VRK3-210ENST00000596121 ARSFP54793 590 aa10.62□□□□□ -0.71
VRK3-210ENST00000596121 SLC29A2Q14542 456 aa10.62□□□□□ -0.71
VRK3-210ENST00000596121 YOD1Q5VVQ6 348 aaPredicted RBP10.62□□□□□ -0.71
VRK3-210ENST00000596121 NXPE4Q6UWF7 544 aa10.62□□□□□ -0.71
VRK3-210ENST00000596121 FRA10AC1Q70Z53 315 aa10.62□□□□□ -0.71
VRK3-210ENST00000596121 PRSS41Q7RTY9 318 aa10.62□□□□□ -0.71
VRK3-210ENST00000596121 SYVN1Q86TM6 617 aa10.62□□□□□ -0.71
VRK3-210ENST00000596121 TTC29Q8NA56 475 aaPredicted RBP10.62□□□□□ -0.71
VRK3-210ENST00000596121 PDPRQ8NCN5 879 aa10.62□□□□□ -0.71
VRK3-210ENST00000596121 SLC5A11Q8WWX8 675 aa10.62□□□□□ -0.71
VRK3-210ENST00000596121 ISL2Q96A47 359 aa10.62□□□□□ -0.71
VRK3-210ENST00000596121 HAUS8Q9BT25 410 aa10.62□□□□□ -0.71
VRK3-210ENST00000596121 NMRAL1Q9HBL8 299 aa10.62□□□□□ -0.71
VRK3-210ENST00000596121 IFT80Q9P2H3 777 aaPredicted RBP10.62□□□□□ -0.71
VRK3-210ENST00000596121 CTSFQ9UBX1 484 aa10.62□□□□□ -0.71
VRK3-210ENST00000596121 PTBP2Q9UKA9 531 aaKnown RBP10.62□□□□□ -0.71
VRK3-210ENST00000596121 ACOT9Q9Y305 439 aa10.62□□□□□ -0.71
VRK3-210ENST00000596121 BOD1L1Q8NFC6 3051 aa10.62□□□□□ -0.71
VRK3-210ENST00000596121 MED13Q9UHV7 2174 aa10.62□□□□□ -0.71
VRK3-210ENST00000596121 BSNQ9UPA5 3926 aa10.62□□□□□ -0.71
VRK3-210ENST00000596121 A0A087X1B8 175 aa10.61□□□□□ -0.71
VRK3-210ENST00000596121 TRIM49D1C9J1S8 452 aa10.61□□□□□ -0.71
VRK3-210ENST00000596121 UBXN8O00124 270 aa10.61□□□□□ -0.71
VRK3-210ENST00000596121 MASP2O00187 686 aa10.61□□□□□ -0.71
VRK3-210ENST00000596121 KERAO60938 352 aa10.61□□□□□ -0.71
VRK3-210ENST00000596121 DNAJB6O75190 326 aa10.61□□□□□ -0.71
VRK3-210ENST00000596121 RFPL1O75677 317 aa10.61□□□□□ -0.71
VRK3-210ENST00000596121 WDR47O94967 919 aa10.61□□□□□ -0.71
VRK3-210ENST00000596121 INHBAP08476 426 aa10.61□□□□□ -0.71
VRK3-210ENST00000596121 TNFRSF8P28908 595 aa10.61□□□□□ -0.71
VRK3-210ENST00000596121 TYK2P29597 1187 aa10.61□□□□□ -0.71
VRK3-210ENST00000596121 SLC26A3P40879 764 aa10.61□□□□□ -0.71
VRK3-210ENST00000596121 MSH2P43246 934 aa10.61□□□□□ -0.71
VRK3-210ENST00000596121 HSPA7P48741 367 aa10.61□□□□□ -0.71
VRK3-210ENST00000596121 HNMTP50135 292 aa10.61□□□□□ -0.71
VRK3-210ENST00000596121 SERPINB8P50452 374 aa10.61□□□□□ -0.71
VRK3-210ENST00000596121 EFNA3P52797 238 aa10.61□□□□□ -0.71
VRK3-210ENST00000596121 EMP3P54852 163 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms