RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 TSR3Q9UJK0 312 aaKnown RBP9.43□□□□□ -0.9
LIG1-209ENST00000596104 AKAP9Q99996 3911 aa9.42□□□□□ -0.9
LIG1-209ENST00000596104 A8MUI8 341 aa9.42□□□□□ -0.9
LIG1-209ENST00000596104 H0YIG0 161 aa9.42□□□□□ -0.9
LIG1-209ENST00000596104 TXNDC9O14530 226 aa9.42□□□□□ -0.9
LIG1-209ENST00000596104 HAT1O14929 419 aa9.42□□□□□ -0.9
LIG1-209ENST00000596104 IPO7O95373 1038 aaKnown RBP9.42□□□□□ -0.9
LIG1-209ENST00000596104 CLDN14O95500 239 aa9.42□□□□□ -0.9
LIG1-209ENST00000596104 CYC1P08574 325 aa9.42□□□□□ -0.9
LIG1-209ENST00000596104 PKMP14618 531 aaKnown RBP9.42□□□□□ -0.9
LIG1-209ENST00000596104 RPA3P35244 121 aaPredicted RBP9.42□□□□□ -0.9
LIG1-209ENST00000596104 PNLIPRP1P54315 467 aa9.42□□□□□ -0.9
LIG1-209ENST00000596104 SESN2P58004 480 aaPredicted RBP9.42□□□□□ -0.9
LIG1-209ENST00000596104 TUBA3CQ13748 450 aa9.42□□□□□ -0.9
LIG1-209ENST00000596104 TYSND1Q2T9J0 566 aa9.42□□□□□ -0.9
LIG1-209ENST00000596104 BTBD16Q32M84 506 aa9.42□□□□□ -0.9
LIG1-209ENST00000596104 KRTCAP3Q53RY4 240 aa9.42□□□□□ -0.9
LIG1-209ENST00000596104 ACER2Q5QJU3 275 aa9.42□□□□□ -0.9
LIG1-209ENST00000596104 FCRLBQ6BAA4 426 aa9.42□□□□□ -0.9
LIG1-209ENST00000596104 TUBA3EQ6PEY2 450 aa9.42□□□□□ -0.9
LIG1-209ENST00000596104 SPNS3Q6ZMD2 512 aa9.42□□□□□ -0.9
LIG1-209ENST00000596104 NCCRP1Q6ZVX7 275 aaPredicted RBP9.42□□□□□ -0.9
LIG1-209ENST00000596104 CPEB2Q7Z5Q1 589 aaKnown RBP9.42□□□□□ -0.9
LIG1-209ENST00000596104 SPPL2CQ8IUH8 684 aa9.42□□□□□ -0.9
LIG1-209ENST00000596104 PLD3Q8IV08 490 aa9.42□□□□□ -0.9
LIG1-209ENST00000596104 SIAH3Q8IW03 269 aa9.42□□□□□ -0.9
LIG1-209ENST00000596104 CHERPQ8IWX8 916 aaKnown RBP9.42□□□□□ -0.9
LIG1-209ENST00000596104 OR9A4Q8NGU2 314 aa9.42□□□□□ -0.9
LIG1-209ENST00000596104 RERGQ96A58 199 aaPredicted RBP9.42□□□□□ -0.9
LIG1-209ENST00000596104 FAM136AQ96C01 138 aa9.42□□□□□ -0.9
LIG1-209ENST00000596104 SCMH1Q96GD3 660 aa9.42□□□□□ -0.9
LIG1-209ENST00000596104 HES6Q96HZ4 224 aa9.42□□□□□ -0.9
LIG1-209ENST00000596104 MAGED4Q96JG8 741 aa9.42□□□□□ -0.9
LIG1-209ENST00000596104 ZNF354BQ96LW1 612 aa9.42□□□□□ -0.9
LIG1-209ENST00000596104 FRMD6Q96NE9 622 aa9.42□□□□□ -0.9
LIG1-209ENST00000596104 CYTH2Q99418 400 aa9.42□□□□□ -0.9
LIG1-209ENST00000596104 PKP4Q99569 1192 aa9.42□□□□□ -0.9
LIG1-209ENST00000596104 NPAS2Q99743 824 aa9.42□□□□□ -0.9
LIG1-209ENST00000596104 FRMD8P1Q9BZ68 369 aaPredicted RBP9.42□□□□□ -0.9
LIG1-209ENST00000596104 GALPQ9UBC7 116 aa9.42□□□□□ -0.9
LIG1-209ENST00000596104 MEMO1Q9Y316 297 aa9.42□□□□□ -0.9
LIG1-209ENST00000596104 TACC2O95359 2948 aa9.42□□□□□ -0.9
LIG1-209ENST00000596104 NF1P21359 2839 aa9.41□□□□□ -0.9
LIG1-209ENST00000596104 E7ENX8 843 aa9.41□□□□□ -0.9
LIG1-209ENST00000596104 FAM227AF5H4B4 570 aa9.41□□□□□ -0.9
LIG1-209ENST00000596104 H3BMM5 538 aa9.41□□□□□ -0.9
LIG1-209ENST00000596104 SMAPO00193 183 aa9.41□□□□□ -0.9
LIG1-209ENST00000596104 TTI1O43156 1089 aa9.41□□□□□ -0.9
LIG1-209ENST00000596104 MAN1A2O60476 641 aa9.41□□□□□ -0.9
LIG1-209ENST00000596104 CCNDBP1O95273 360 aa9.41□□□□□ -0.9
LIG1-209ENST00000596104 SLC16A8O95907 504 aa9.41□□□□□ -0.9
LIG1-209ENST00000596104 ESR1P03372 595 aa9.41□□□□□ -0.9
LIG1-209ENST00000596104 ZSCAN5DPP0CG00 497 aa9.41□□□□□ -0.9
LIG1-209ENST00000596104 ESRRAP11474 423 aaPredicted RBP9.41□□□□□ -0.9
LIG1-209ENST00000596104 CAPN3P20807 821 aa9.41□□□□□ -0.9
LIG1-209ENST00000596104 FMO4P31512 558 aa9.41□□□□□ -0.9
LIG1-209ENST00000596104 RPL22P35268 128 aaKnown RBP9.41□□□□□ -0.9
LIG1-209ENST00000596104 HSD17B2P37059 387 aa9.41□□□□□ -0.9
LIG1-209ENST00000596104 CD96P40200 585 aa9.41□□□□□ -0.9
LIG1-209ENST00000596104 ST13P50502 369 aaKnown RBP9.41□□□□□ -0.9
LIG1-209ENST00000596104 ADARP55265 1226 aaKnown RBP9.41□□□□□ -0.9
LIG1-209ENST00000596104 ABATP80404 500 aa9.41□□□□□ -0.9
LIG1-209ENST00000596104 ALDH6A1Q02252 535 aaKnown RBP9.41□□□□□ -0.9
LIG1-209ENST00000596104 TAP2Q03519 686 aa9.41□□□□□ -0.9
LIG1-209ENST00000596104 TSTA3Q13630 321 aaPredicted RBP9.41□□□□□ -0.9
LIG1-209ENST00000596104 KCNJ11Q14654 390 aa9.41□□□□□ -0.9
LIG1-209ENST00000596104 NDUFA9Q16795 377 aa9.41□□□□□ -0.9
LIG1-209ENST00000596104 KLHL38Q2WGJ6 581 aa9.41□□□□□ -0.9
LIG1-209ENST00000596104 PRSS41Q7RTY9 318 aa9.41□□□□□ -0.9
LIG1-209ENST00000596104 VN1R4Q7Z5H5 301 aa9.41□□□□□ -0.9
LIG1-209ENST00000596104 ANKRD37Q7Z713 158 aa9.41□□□□□ -0.9
LIG1-209ENST00000596104 CRLF3Q8IUI8 442 aa9.41□□□□□ -0.9
LIG1-209ENST00000596104 SPNS2Q8IVW8 549 aa9.41□□□□□ -0.9
LIG1-209ENST00000596104 LRRC56Q8IYG6 542 aaPredicted RBP9.41□□□□□ -0.9
LIG1-209ENST00000596104 SYCE1Q8N0S2 351 aa9.41□□□□□ -0.9
LIG1-209ENST00000596104 PPFIBP2Q8ND30 876 aa9.41□□□□□ -0.9
LIG1-209ENST00000596104 ZNF480Q8WV37 535 aa9.41□□□□□ -0.9
LIG1-209ENST00000596104 C1orf54Q8WWF1 131 aa9.41□□□□□ -0.9
LIG1-209ENST00000596104 METTL21AQ8WXB1 218 aa9.41□□□□□ -0.9
LIG1-209ENST00000596104 MFSD3Q96ES6 412 aa9.41□□□□□ -0.9
LIG1-209ENST00000596104 SPOCK3Q9BQ16 436 aa9.41□□□□□ -0.9
LIG1-209ENST00000596104 TREX2Q9BQ50 279 aaPredicted RBP9.41□□□□□ -0.9
LIG1-209ENST00000596104 TRIM51Q9BSJ1 452 aa9.41□□□□□ -0.9
LIG1-209ENST00000596104 KIFC1Q9BW19 673 aa9.41□□□□□ -0.9
LIG1-209ENST00000596104 TRIM5Q9C035 493 aa9.41□□□□□ -0.9
LIG1-209ENST00000596104 IL22Q9GZX6 179 aa9.41□□□□□ -0.9
LIG1-209ENST00000596104 ENKD1Q9H0I2 346 aa9.41□□□□□ -0.9
LIG1-209ENST00000596104 TSPAN10Q9H1Z9 355 aaPredicted RBP9.41□□□□□ -0.9
LIG1-209ENST00000596104 EIF2B3Q9NR50 452 aaKnown RBP9.41□□□□□ -0.9
LIG1-209ENST00000596104 KLHL1Q9NR64 748 aa9.41□□□□□ -0.9
LIG1-209ENST00000596104 FAM114A2Q9NRY5 505 aa9.41□□□□□ -0.9
LIG1-209ENST00000596104 ANKRD10Q9NXR5 420 aa9.41□□□□□ -0.9
LIG1-209ENST00000596104 UTP6Q9NYH9 597 aaKnown RBP9.41□□□□□ -0.9
LIG1-209ENST00000596104 PAK5Q9P286 719 aa9.41□□□□□ -0.9
LIG1-209ENST00000596104 ZNF148Q9UQR1 794 aa9.41□□□□□ -0.9
LIG1-209ENST00000596104 OR2W5A6NFC9 320 aa9.4□□□□□ -0.9
LIG1-209ENST00000596104 GOLGA8KD6RF30 607 aa9.4□□□□□ -0.9
LIG1-209ENST00000596104 NPIPA5E9PKD4 350 aa9.4□□□□□ -0.9
LIG1-209ENST00000596104 GOLGA8TH3BQL2 631 aa9.4□□□□□ -0.9
LIG1-209ENST00000596104 ADAM10O14672 748 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms