RNA–Protein interactions for RNA: ENST00000595897.5

ARHGEF1-213, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-213ENST00000595897 LHX3Q9UBR4 397 aa16.83■□□□□ 0.29
ARHGEF1-213ENST00000595897 SNX8Q9Y5X2 465 aa16.83■□□□□ 0.29
ARHGEF1-213ENST00000595897 PLXNA3P51805 1871 aa16.83■□□□□ 0.29
ARHGEF1-213ENST00000595897 PNMA8CA0A1B0GUJ8 204 aa16.83■□□□□ 0.28
ARHGEF1-213ENST00000595897 NUDT7P0C024 238 aa16.83■□□□□ 0.28
ARHGEF1-213ENST00000595897 HIST1H2AGP0C0S8 130 aaPredicted RBP16.83■□□□□ 0.28
ARHGEF1-213ENST00000595897 HIST1H2ADP20671 130 aa16.83■□□□□ 0.28
ARHGEF1-213ENST00000595897 SOX6P35712 828 aa16.83■□□□□ 0.28
ARHGEF1-213ENST00000595897 ZXDBP98169 803 aa16.83■□□□□ 0.28
ARHGEF1-213ENST00000595897 CXorf57Q6NSI4 855 aaKnown RBP16.83■□□□□ 0.28
ARHGEF1-213ENST00000595897 RSPO2Q6UXX9 243 aaPredicted RBP16.83■□□□□ 0.28
ARHGEF1-213ENST00000595897 UBE2R2Q712K3 238 aaPredicted RBP16.83■□□□□ 0.28
ARHGEF1-213ENST00000595897 CELF2-AS1Q8N7Q2 184 aa16.83■□□□□ 0.28
ARHGEF1-213ENST00000595897 HIST1H2AHQ96KK5 128 aa16.83■□□□□ 0.28
ARHGEF1-213ENST00000595897 HIST1H2AJQ99878 128 aa16.83■□□□□ 0.28
ARHGEF1-213ENST00000595897 H2AFJQ9BTM1 129 aa16.83■□□□□ 0.28
ARHGEF1-213ENST00000595897 MARCH7Q9H992 704 aa16.83■□□□□ 0.28
ARHGEF1-213ENST00000595897 TPT1P8Q9HAU6 139 aa16.83■□□□□ 0.28
ARHGEF1-213ENST00000595897 NMRK2Q9NPI5 230 aa16.83■□□□□ 0.28
ARHGEF1-213ENST00000595897 PDZK1P1A8MUH7 402 aa16.83■□□□□ 0.28
ARHGEF1-213ENST00000595897 TNFRSF11BO00300 401 aa16.83■□□□□ 0.28
ARHGEF1-213ENST00000595897 FZD6O60353 706 aa16.83■□□□□ 0.28
ARHGEF1-213ENST00000595897 AMD1P17707 334 aa16.83■□□□□ 0.28
ARHGEF1-213ENST00000595897 GGT2P36268 569 aa16.83■□□□□ 0.28
ARHGEF1-213ENST00000595897 BMPR1AP36894 532 aa16.83■□□□□ 0.28
ARHGEF1-213ENST00000595897 SRSF11Q05519 484 aaKnown RBP16.83■□□□□ 0.28
ARHGEF1-213ENST00000595897 HSPA14Q0VDF9 509 aa16.83■□□□□ 0.28
ARHGEF1-213ENST00000595897 FOXD4Q12950 439 aaPredicted RBP16.83■□□□□ 0.28
ARHGEF1-213ENST00000595897 ABRQ12979 859 aa16.83■□□□□ 0.28
ARHGEF1-213ENST00000595897 CSTF3Q12996 717 aaKnown RBP16.83■□□□□ 0.28
ARHGEF1-213ENST00000595897 GPR17Q13304 367 aa16.83■□□□□ 0.28
ARHGEF1-213ENST00000595897 ANGPTL8Q6UXH0 198 aa16.83■□□□□ 0.28
ARHGEF1-213ENST00000595897 PGBD3Q8N328 593 aa16.83■□□□□ 0.28
ARHGEF1-213ENST00000595897 TRPV1Q8NER1 839 aa16.83■□□□□ 0.28
ARHGEF1-213ENST00000595897 MAL2Q969L2 176 aa16.83■□□□□ 0.28
ARHGEF1-213ENST00000595897 EPYCQ99645 322 aa16.83■□□□□ 0.28
ARHGEF1-213ENST00000595897 HTATIP2Q9BUP3 242 aa16.83■□□□□ 0.28
ARHGEF1-213ENST00000595897 ITPKAP23677 461 aa16.82■□□□□ 0.28
ARHGEF1-213ENST00000595897 DDX39BQ13838 428 aaKnown RBP16.82■□□□□ 0.28
ARHGEF1-213ENST00000595897 DMC1Q14565 340 aa16.82■□□□□ 0.28
ARHGEF1-213ENST00000595897 PTCHD3Q3KNS1 767 aa16.82■□□□□ 0.28
ARHGEF1-213ENST00000595897 ADGRF1Q5T601 910 aa16.82■□□□□ 0.28
ARHGEF1-213ENST00000595897 FRG2Q64ET8 278 aa16.82■□□□□ 0.28
ARHGEF1-213ENST00000595897 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.82■□□□□ 0.28
ARHGEF1-213ENST00000595897 MACC1Q6ZN28 852 aa16.82■□□□□ 0.28
ARHGEF1-213ENST00000595897 MSANTD1Q6ZTZ1 278 aa16.82■□□□□ 0.28
ARHGEF1-213ENST00000595897 SLC24A5Q71RS6 500 aa16.82■□□□□ 0.28
ARHGEF1-213ENST00000595897 CHST9Q7L1S5 443 aa16.82■□□□□ 0.28
ARHGEF1-213ENST00000595897 PIH1D2Q8WWB5 315 aa16.82■□□□□ 0.28
ARHGEF1-213ENST00000595897 FRG2BQ96QU4 278 aa16.82■□□□□ 0.28
ARHGEF1-213ENST00000595897 GABARAPL3Q9BY60 117 aa16.82■□□□□ 0.28
ARHGEF1-213ENST00000595897 DDX28Q9NUL7 540 aaKnown RBP16.82■□□□□ 0.28
ARHGEF1-213ENST00000595897 IMPAD1Q9NX62 359 aa16.82■□□□□ 0.28
ARHGEF1-213ENST00000595897 KCTD5Q9NXV2 234 aa16.82■□□□□ 0.28
ARHGEF1-213ENST00000595897 MKLN1Q9UL63 735 aa16.82■□□□□ 0.28
ARHGEF1-213ENST00000595897 K7ERQ8 282 aa16.82■□□□□ 0.28
ARHGEF1-213ENST00000595897 COCHO43405 550 aa16.82■□□□□ 0.28
ARHGEF1-213ENST00000595897 PTHP01270 115 aa16.82■□□□□ 0.28
ARHGEF1-213ENST00000595897 ADORA3P0DMS8 318 aa16.82■□□□□ 0.28
ARHGEF1-213ENST00000595897 RGS6P49758 472 aa16.82■□□□□ 0.28
ARHGEF1-213ENST00000595897 SEMG2Q02383 582 aa16.82■□□□□ 0.28
ARHGEF1-213ENST00000595897 ST3GAL4Q11206 333 aa16.82■□□□□ 0.28
ARHGEF1-213ENST00000595897 UGT8Q16880 541 aa16.82■□□□□ 0.28
ARHGEF1-213ENST00000595897 FBXO43Q4G163 708 aa16.82■□□□□ 0.28
ARHGEF1-213ENST00000595897 HECTD3Q5T447 861 aa16.82■□□□□ 0.28
ARHGEF1-213ENST00000595897 RTN4RL1Q86UN2 441 aaPredicted RBP16.82■□□□□ 0.28
ARHGEF1-213ENST00000595897 COL21A1Q96P44 957 aa16.82■□□□□ 0.28
ARHGEF1-213ENST00000595897 C14orf119Q9NWQ9 140 aa16.82■□□□□ 0.28
ARHGEF1-213ENST00000595897 CCDC59Q9P031 241 aaKnown RBP16.82■□□□□ 0.28
ARHGEF1-213ENST00000595897 FZD4Q9ULV1 537 aa16.82■□□□□ 0.28
ARHGEF1-213ENST00000595897 SLC22A14Q9Y267 594 aa16.82■□□□□ 0.28
ARHGEF1-213ENST00000595897 A6NL46 340 aa16.81■□□□□ 0.28
ARHGEF1-213ENST00000595897 IDH3BO43837 385 aa16.81■□□□□ 0.28
ARHGEF1-213ENST00000595897 STC2O76061 302 aa16.81■□□□□ 0.28
ARHGEF1-213ENST00000595897 MFN2O95140 757 aa16.81■□□□□ 0.28
ARHGEF1-213ENST00000595897 BPIP17213 487 aa16.81■□□□□ 0.28
ARHGEF1-213ENST00000595897 ATF6P18850 670 aa16.81■□□□□ 0.28
ARHGEF1-213ENST00000595897 GKP32189 559 aa16.81■□□□□ 0.28
ARHGEF1-213ENST00000595897 SH3KBP1Q96B97 665 aa16.81■□□□□ 0.28
ARHGEF1-213ENST00000595897 C7orf34Q96L11 122 aa16.81■□□□□ 0.28
ARHGEF1-213ENST00000595897 NOX1Q9Y5S8 564 aa16.81■□□□□ 0.28
ARHGEF1-213ENST00000595897 LOC110117498-PIK3R3F6TDL0 507 aa16.81■□□□□ 0.28
ARHGEF1-213ENST00000595897 GFRA2O00451 464 aa16.81■□□□□ 0.28
ARHGEF1-213ENST00000595897 KMOO15229 486 aa16.81■□□□□ 0.28
ARHGEF1-213ENST00000595897 ZW10O43264 779 aa16.81■□□□□ 0.28
ARHGEF1-213ENST00000595897 EOMESO95936 686 aa16.81■□□□□ 0.28
ARHGEF1-213ENST00000595897 ASGR1P07306 291 aa16.81■□□□□ 0.28
ARHGEF1-213ENST00000595897 PTPN2P17706 415 aa16.81■□□□□ 0.28
ARHGEF1-213ENST00000595897 UGT2B15P54855 530 aa16.81■□□□□ 0.28
ARHGEF1-213ENST00000595897 MTAPQ13126 283 aa16.81■□□□□ 0.28
ARHGEF1-213ENST00000595897 TAF1CQ15572 869 aaPredicted RBP16.81■□□□□ 0.28
ARHGEF1-213ENST00000595897 LRRC70Q7Z2Q7 622 aa16.81■□□□□ 0.28
ARHGEF1-213ENST00000595897 SLC5A8Q8N695 610 aa16.81■□□□□ 0.28
ARHGEF1-213ENST00000595897 KCNS3Q9BQ31 491 aa16.81■□□□□ 0.28
ARHGEF1-213ENST00000595897 ZNF221Q9UK13 617 aa16.81■□□□□ 0.28
ARHGEF1-213ENST00000595897 INPPL1O15357 1258 aa16.8■□□□□ 0.28
ARHGEF1-213ENST00000595897 VNN2O95498 520 aa16.8■□□□□ 0.28
ARHGEF1-213ENST00000595897 OLR1P78380 273 aa16.8■□□□□ 0.28
ARHGEF1-213ENST00000595897 KCNJ10P78508 379 aa16.8■□□□□ 0.28
ARHGEF1-213ENST00000595897 PPIGQ13427 754 aaKnown RBP eCLIP16.8■□□□□ 0.282e-7■■■□□ 14.9
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms