RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 HRH2P25021 359 aa10.47□□□□□ -0.73
SHKBP1-206ENST00000595523 SPRP35270 261 aaPredicted RBP10.47□□□□□ -0.73
SHKBP1-206ENST00000595523 BCL6P41182 706 aa10.47□□□□□ -0.73
SHKBP1-206ENST00000595523 OR1D4P47884 311 aa10.47□□□□□ -0.73
SHKBP1-206ENST00000595523 PMS2P54278 862 aa10.47□□□□□ -0.73
SHKBP1-206ENST00000595523 EMP3P54852 163 aa10.47□□□□□ -0.73
SHKBP1-206ENST00000595523 SLC12A2P55011 1212 aa10.47□□□□□ -0.73
SHKBP1-206ENST00000595523 RAB10P61026 200 aa10.47□□□□□ -0.73
SHKBP1-206ENST00000595523 CDKL1Q00532 357 aa10.47□□□□□ -0.73
SHKBP1-206ENST00000595523 CHAF1BQ13112 559 aa10.47□□□□□ -0.73
SHKBP1-206ENST00000595523 KCNAB2Q13303 367 aa10.47□□□□□ -0.73
SHKBP1-206ENST00000595523 BMPR2Q13873 1038 aa10.47□□□□□ -0.73
SHKBP1-206ENST00000595523 SLMAPQ14BN4 828 aa10.47□□□□□ -0.73
SHKBP1-206ENST00000595523 OR4D1Q15615 310 aa10.47□□□□□ -0.73
SHKBP1-206ENST00000595523 FAM214AQ32MH5 1076 aa10.47□□□□□ -0.73
SHKBP1-206ENST00000595523 OVCH1Q7RTY7 1134 aa10.47□□□□□ -0.73
SHKBP1-206ENST00000595523 ADAMTSL2Q86TH1 951 aa10.47□□□□□ -0.73
SHKBP1-206ENST00000595523 APLFQ8IW19 511 aaPredicted RBP10.47□□□□□ -0.73
SHKBP1-206ENST00000595523 ABHD11Q8NFV4 315 aa10.47□□□□□ -0.73
SHKBP1-206ENST00000595523 OR4K1Q8NGD4 311 aa10.47□□□□□ -0.73
SHKBP1-206ENST00000595523 OR2Y1Q8NGV0 311 aa10.47□□□□□ -0.73
SHKBP1-206ENST00000595523 ATL1Q8WXF7 558 aa10.47□□□□□ -0.73
SHKBP1-206ENST00000595523 THAP4Q8WY91 577 aa10.47□□□□□ -0.73
SHKBP1-206ENST00000595523 NEIL2Q969S2 332 aa10.47□□□□□ -0.73
SHKBP1-206ENST00000595523 FKBP10Q96AY3 582 aa10.47□□□□□ -0.73
SHKBP1-206ENST00000595523 RHBDF1Q96CC6 855 aa10.47□□□□□ -0.73
SHKBP1-206ENST00000595523 SPSB2Q99619 263 aa10.47□□□□□ -0.73
SHKBP1-206ENST00000595523 C17orf62Q9BQA9 187 aa10.47□□□□□ -0.73
SHKBP1-206ENST00000595523 SLC26A1Q9H2B4 701 aa10.47□□□□□ -0.73
SHKBP1-206ENST00000595523 SPNS1Q9H2V7 528 aa10.47□□□□□ -0.73
SHKBP1-206ENST00000595523 CTSFQ9UBX1 484 aa10.47□□□□□ -0.73
SHKBP1-206ENST00000595523 TUBD1Q9UJT1 453 aa10.47□□□□□ -0.73
SHKBP1-206ENST00000595523 MAN2B2Q9Y2E5 1009 aa10.47□□□□□ -0.73
SHKBP1-206ENST00000595523 PTRH2Q9Y3E5 179 aaKnown RBP10.47□□□□□ -0.73
SHKBP1-206ENST00000595523 MAU2Q9Y6X3 613 aa10.47□□□□□ -0.73
SHKBP1-206ENST00000595523 ARGFXA6NJG6 315 aa10.46□□□□□ -0.73
SHKBP1-206ENST00000595523 K7EM74 188 aa10.46□□□□□ -0.73
SHKBP1-206ENST00000595523 TAPBPO15533 448 aa10.46□□□□□ -0.73
SHKBP1-206ENST00000595523 FOXS1O43638 330 aa10.46□□□□□ -0.73
SHKBP1-206ENST00000595523 ACSL3O95573 720 aa10.46□□□□□ -0.73
SHKBP1-206ENST00000595523 FOLR3P41439 243 aa10.46□□□□□ -0.73
SHKBP1-206ENST00000595523 GDF5P43026 501 aa10.46□□□□□ -0.73
SHKBP1-206ENST00000595523 SLC6A12P48065 614 aa10.46□□□□□ -0.73
SHKBP1-206ENST00000595523 KCNC1P48547 511 aa10.46□□□□□ -0.73
SHKBP1-206ENST00000595523 RPS15AP62244 130 aaKnown RBP10.46□□□□□ -0.73
SHKBP1-206ENST00000595523 MEF2AQ02078 507 aaPredicted RBP10.46□□□□□ -0.73
SHKBP1-206ENST00000595523 ATP1A4Q13733 1029 aa10.46□□□□□ -0.73
SHKBP1-206ENST00000595523 CSHL1Q14406 222 aa10.46□□□□□ -0.73
SHKBP1-206ENST00000595523 TGFBIQ15582 683 aa10.46□□□□□ -0.73
SHKBP1-206ENST00000595523 NKG7Q16617 165 aa10.46□□□□□ -0.73
SHKBP1-206ENST00000595523 MUM1Q2TAK8 710 aa10.46□□□□□ -0.73
SHKBP1-206ENST00000595523 CATSPEREQ5SY80 951 aa10.46□□□□□ -0.73
SHKBP1-206ENST00000595523 PPP1R32Q7Z5V6 425 aa10.46□□□□□ -0.73
SHKBP1-206ENST00000595523 MRGPREQ86SM8 312 aa10.46□□□□□ -0.73
SHKBP1-206ENST00000595523 THOC6Q86W42 341 aaKnown RBP10.46□□□□□ -0.73
SHKBP1-206ENST00000595523 KLHDC8AQ8IYD2 350 aa10.46□□□□□ -0.73
SHKBP1-206ENST00000595523 CENPLQ8N0S6 344 aaPredicted RBP10.46□□□□□ -0.73
SHKBP1-206ENST00000595523 SHISA5Q8N114 240 aa10.46□□□□□ -0.73
SHKBP1-206ENST00000595523 AMER3Q8N944 861 aa10.46□□□□□ -0.73
SHKBP1-206ENST00000595523 ZNF740Q8NDX6 193 aa10.46□□□□□ -0.73
SHKBP1-206ENST00000595523 RERGQ96A58 199 aaPredicted RBP10.46□□□□□ -0.73
SHKBP1-206ENST00000595523 TM4SF19Q96DZ7 209 aa10.46□□□□□ -0.73
SHKBP1-206ENST00000595523 MRRFQ96E11 262 aaKnown RBP10.46□□□□□ -0.73
SHKBP1-206ENST00000595523 ABHD17AQ96GS6 310 aa10.46□□□□□ -0.73
SHKBP1-206ENST00000595523 CABS1Q96KC9 395 aa10.46□□□□□ -0.73
SHKBP1-206ENST00000595523 TSNARE1Q96NA8 513 aa10.46□□□□□ -0.73
SHKBP1-206ENST00000595523 CYTH2Q99418 400 aa10.46□□□□□ -0.73
SHKBP1-206ENST00000595523 MACROD1Q9BQ69 325 aa10.46□□□□□ -0.73
SHKBP1-206ENST00000595523 TMEM79Q9BSE2 394 aa10.46□□□□□ -0.73
SHKBP1-206ENST00000595523 HAUS8Q9BT25 410 aa10.46□□□□□ -0.73
SHKBP1-206ENST00000595523 SARGQ9BW04 601 aa10.46□□□□□ -0.73
SHKBP1-206ENST00000595523 WDR54Q9H977 334 aa10.46□□□□□ -0.73
SHKBP1-206ENST00000595523 L2HGDHQ9H9P8 463 aa10.46□□□□□ -0.73
SHKBP1-206ENST00000595523 IGSF5Q9NSI5 407 aa10.46□□□□□ -0.73
SHKBP1-206ENST00000595523 GPN3Q9UHW5 284 aaPredicted RBP10.46□□□□□ -0.73
SHKBP1-206ENST00000595523 NFU1Q9UMS0 254 aa10.46□□□□□ -0.73
SHKBP1-206ENST00000595523 PADI2Q9Y2J8 665 aa10.46□□□□□ -0.73
SHKBP1-206ENST00000595523 CPAMD8Q8IZJ3 1885 aa10.45□□□□□ -0.74
SHKBP1-206ENST00000595523 PABPN1LA6NDY0 278 aaKnown RBP10.45□□□□□ -0.74
SHKBP1-206ENST00000595523 NCF1BA6NI72 391 aaPredicted RBP10.45□□□□□ -0.74
SHKBP1-206ENST00000595523 VSTM2BA6NLU5 285 aa10.45□□□□□ -0.74
SHKBP1-206ENST00000595523 NCF1CA8MVU1 366 aaPredicted RBP10.45□□□□□ -0.74
SHKBP1-206ENST00000595523 FFAR3O14843 346 aa10.45□□□□□ -0.74
SHKBP1-206ENST00000595523 GPR42O15529 346 aa10.45□□□□□ -0.74
SHKBP1-206ENST00000595523 RFPL1O75677 317 aa10.45□□□□□ -0.74
SHKBP1-206ENST00000595523 ALBP02768 609 aa10.45□□□□□ -0.74
SHKBP1-206ENST00000595523 ALDOAP04075 364 aaKnown RBP10.45□□□□□ -0.74
SHKBP1-206ENST00000595523 PDGFAP04085 211 aa10.45□□□□□ -0.74
SHKBP1-206ENST00000595523 ANXA5P08758 320 aa10.45□□□□□ -0.74
SHKBP1-206ENST00000595523 RHOXF2BP0C7M4 288 aa10.45□□□□□ -0.74
SHKBP1-206ENST00000595523 NCF1P14598 390 aaPredicted RBP10.45□□□□□ -0.74
SHKBP1-206ENST00000595523 NR1D1P20393 614 aa10.45□□□□□ -0.74
SHKBP1-206ENST00000595523 OTX2P32243 289 aa10.45□□□□□ -0.74
SHKBP1-206ENST00000595523 PHBP35232 272 aa10.45□□□□□ -0.74
SHKBP1-206ENST00000595523 ATP6V0D1P61421 351 aa10.45□□□□□ -0.74
SHKBP1-206ENST00000595523 IRF9Q00978 393 aa10.45□□□□□ -0.74
SHKBP1-206ENST00000595523 NFATC3Q12968 1075 aa10.45□□□□□ -0.74
SHKBP1-206ENST00000595523 SSPNQ14714 243 aa10.45□□□□□ -0.74
SHKBP1-206ENST00000595523 FBXO48Q5FWF7 155 aa10.45□□□□□ -0.74
SHKBP1-206ENST00000595523 MROH9Q5TGP6 573 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms