RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 KCNJ10P78508 379 aa12.82□□□□□ -0.36
VRK3-209ENST00000594948 LRRC74AQ0VAA2 488 aa12.82□□□□□ -0.36
VRK3-209ENST00000594948 ELOAQ14241 798 aaKnown RBP12.82□□□□□ -0.36
VRK3-209ENST00000594948 CHRNA6Q15825 494 aa12.82□□□□□ -0.36
VRK3-209ENST00000594948 COLEC12Q5KU26 742 aa12.82□□□□□ -0.36
VRK3-209ENST00000594948 FRG2Q64ET8 278 aa12.82□□□□□ -0.36
VRK3-209ENST00000594948 CCSAPQ6IQ19 270 aaPredicted RBP12.82□□□□□ -0.36
VRK3-209ENST00000594948 FUT10Q6P4F1 479 aa12.82□□□□□ -0.36
VRK3-209ENST00000594948 MBOAT1Q6ZNC8 495 aa12.82□□□□□ -0.36
VRK3-209ENST00000594948 TPGS1Q6ZTW0 290 aa12.82□□□□□ -0.36
VRK3-209ENST00000594948 RASAL3Q86YV0 1011 aa12.82□□□□□ -0.36
VRK3-209ENST00000594948 SYT12Q8IV01 421 aa12.82□□□□□ -0.36
VRK3-209ENST00000594948 DEPDC4Q8N2C3 294 aa12.82□□□□□ -0.36
VRK3-209ENST00000594948 DENND6BQ8NEG7 585 aa12.82□□□□□ -0.36
VRK3-209ENST00000594948 APOLD1Q96LR9 279 aa12.82□□□□□ -0.36
VRK3-209ENST00000594948 FRG2BQ96QU4 278 aa12.82□□□□□ -0.36
VRK3-209ENST00000594948 LYSMD1Q96S90 227 aa12.82□□□□□ -0.36
VRK3-209ENST00000594948 CDADC1Q9BWV3 514 aa12.82□□□□□ -0.36
VRK3-209ENST00000594948 ELAC1Q9H777 363 aaKnown RBP12.82□□□□□ -0.36
VRK3-209ENST00000594948 ZBTB20Q9HC78 741 aaPredicted RBP12.82□□□□□ -0.36
VRK3-209ENST00000594948 NPAP1Q9NZP6 1156 aa12.82□□□□□ -0.36
VRK3-209ENST00000594948 SPASTQ9UBP0 616 aa12.82□□□□□ -0.36
VRK3-209ENST00000594948 VPS51Q9UID3 782 aa12.82□□□□□ -0.36
VRK3-209ENST00000594948 MKLN1Q9UL63 735 aa12.82□□□□□ -0.36
VRK3-209ENST00000594948 RUVBL1Q9Y265 456 aaKnown RBP12.82□□□□□ -0.36
VRK3-209ENST00000594948 POFUT2Q9Y2G5 429 aa12.82□□□□□ -0.36
VRK3-209ENST00000594948 FCF1Q9Y324 198 aaKnown RBP12.82□□□□□ -0.36
VRK3-209ENST00000594948 KLK4Q9Y5K2 254 aa12.82□□□□□ -0.36
VRK3-209ENST00000594948 DSCR3O14972 297 aa12.81□□□□□ -0.36
VRK3-209ENST00000594948 ADAMDEC1O15204 470 aa12.81□□□□□ -0.36
VRK3-209ENST00000594948 TBX1O43435 398 aa12.81□□□□□ -0.36
VRK3-209ENST00000594948 SUV39H1O43463 412 aa12.81□□□□□ -0.36
VRK3-209ENST00000594948 KCNK2O95069 426 aa12.81□□□□□ -0.36
VRK3-209ENST00000594948 MED26O95402 600 aa12.81□□□□□ -0.36
VRK3-209ENST00000594948 B3GALT4O96024 378 aa12.81□□□□□ -0.36
VRK3-209ENST00000594948 HIST1H2AGP0C0S8 130 aaPredicted RBP12.81□□□□□ -0.36
VRK3-209ENST00000594948 ANXA8P13928 327 aa12.81□□□□□ -0.36
VRK3-209ENST00000594948 JUPP14923 745 aa12.81□□□□□ -0.36
VRK3-209ENST00000594948 HIST1H2ADP20671 130 aa12.81□□□□□ -0.36
VRK3-209ENST00000594948 MZF1P28698 734 aaPredicted RBP12.81□□□□□ -0.36
VRK3-209ENST00000594948 DEFA1P59665 94 aa12.81□□□□□ -0.36
VRK3-209ENST00000594948 DEFA3P59666 94 aa12.81□□□□□ -0.36
VRK3-209ENST00000594948 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.81□□□□□ -0.36
VRK3-209ENST00000594948 BCL2L1Q07817 233 aa12.81□□□□□ -0.36
VRK3-209ENST00000594948 IRF3Q14653 427 aa12.81□□□□□ -0.36
VRK3-209ENST00000594948 TEAD4Q15561 434 aa12.81□□□□□ -0.36
VRK3-209ENST00000594948 KCNA10Q16322 511 aa12.81□□□□□ -0.36
VRK3-209ENST00000594948 LRIT3Q3SXY7 679 aa12.81□□□□□ -0.36
VRK3-209ENST00000594948 ATXN7L2Q5T6C5 722 aaPredicted RBP12.81□□□□□ -0.36
VRK3-209ENST00000594948 LIPJQ5W064 366 aa12.81□□□□□ -0.36
VRK3-209ENST00000594948 PDE12Q6L8Q7 609 aaKnown RBP12.81□□□□□ -0.36
VRK3-209ENST00000594948 PRR23CQ6ZRP0 262 aa12.81□□□□□ -0.36
VRK3-209ENST00000594948 UBE2R2Q712K3 238 aaPredicted RBP12.81□□□□□ -0.36
VRK3-209ENST00000594948 CCDC80Q76M96 950 aa12.81□□□□□ -0.36
VRK3-209ENST00000594948 CAMKMTQ7Z624 323 aa12.81□□□□□ -0.36
VRK3-209ENST00000594948 GGHQ92820 318 aa12.81□□□□□ -0.36
VRK3-209ENST00000594948 ALG14Q96F25 216 aa12.81□□□□□ -0.36
VRK3-209ENST00000594948 HIST1H2AHQ96KK5 128 aa12.81□□□□□ -0.36
VRK3-209ENST00000594948 HIST1H2AJQ99878 128 aa12.81□□□□□ -0.36
VRK3-209ENST00000594948 H2AFJQ9BTM1 129 aa12.81□□□□□ -0.36
VRK3-209ENST00000594948 DNAJC11Q9NVH1 559 aa12.81□□□□□ -0.36
VRK3-209ENST00000594948 PNMA8BQ9ULN7 279 aaPredicted RBP12.81□□□□□ -0.36
VRK3-209ENST00000594948 MANSC4A6NHS7 340 aaPredicted RBP12.81□□□□□ -0.36
VRK3-209ENST00000594948 LOC110117498-PIK3R3F6TDL0 507 aa12.81□□□□□ -0.36
VRK3-209ENST00000594948 RGS13O14921 159 aa12.81□□□□□ -0.36
VRK3-209ENST00000594948 LRATO95237 230 aa12.81□□□□□ -0.36
VRK3-209ENST00000594948 HSD3B1P14060 373 aa12.81□□□□□ -0.36
VRK3-209ENST00000594948 HSD3B2P26439 372 aa12.81□□□□□ -0.36
VRK3-209ENST00000594948 HNF1BP35680 557 aa12.81□□□□□ -0.36
VRK3-209ENST00000594948 TGFBR1P36897 503 aa12.81□□□□□ -0.36
VRK3-209ENST00000594948 SLC19A1P41440 591 aa12.81□□□□□ -0.36
VRK3-209ENST00000594948 AP1S2P56377 157 aa12.81□□□□□ -0.36
VRK3-209ENST00000594948 SLC13A2Q13183 592 aa12.81□□□□□ -0.36
VRK3-209ENST00000594948 SYT16Q17RD7 645 aa12.81□□□□□ -0.36
VRK3-209ENST00000594948 PRSS36Q5K4E3 855 aa12.81□□□□□ -0.36
VRK3-209ENST00000594948 RTP2Q5QGT7 225 aa12.81□□□□□ -0.36
VRK3-209ENST00000594948 ZNF362Q5T0B9 420 aaPredicted RBP12.81□□□□□ -0.36
VRK3-209ENST00000594948 TRAF7Q6Q0C0 670 aa12.81□□□□□ -0.36
VRK3-209ENST00000594948 ZNF621Q6ZSS3 439 aa12.81□□□□□ -0.36
VRK3-209ENST00000594948 METTL3Q86U44 580 aaKnown RBP12.81□□□□□ -0.36
VRK3-209ENST00000594948 FAM124AQ86V42 546 aa12.81□□□□□ -0.36
VRK3-209ENST00000594948 PAF1Q8N7H5 531 aa12.81□□□□□ -0.36
VRK3-209ENST00000594948 HJURPQ8NCD3 748 aaPredicted RBP12.81□□□□□ -0.36
VRK3-209ENST00000594948 ZNF675Q8TD23 568 aa12.81□□□□□ -0.36
VRK3-209ENST00000594948 PIK3R3Q92569 461 aa12.81□□□□□ -0.36
VRK3-209ENST00000594948 UBE2FQ969M7 185 aa12.81□□□□□ -0.36
VRK3-209ENST00000594948 EGLN2Q96KS0 407 aa12.81□□□□□ -0.36
VRK3-209ENST00000594948 DOHHQ9BU89 302 aa12.81□□□□□ -0.36
VRK3-209ENST00000594948 TRPM5Q9NZQ8 1165 aa12.81□□□□□ -0.36
VRK3-209ENST00000594948 CASP8AP2Q9UKL3 1982 aa12.8□□□□□ -0.36
VRK3-209ENST00000594948 IGLV3-16A0A075B6K0 115 aa12.8□□□□□ -0.36
VRK3-209ENST00000594948 TBL1XO60907 577 aa12.8□□□□□ -0.36
VRK3-209ENST00000594948 AOC2O75106 756 aa12.8□□□□□ -0.36
VRK3-209ENST00000594948 CLDN7O95471 211 aa12.8□□□□□ -0.36
VRK3-209ENST00000594948 DLGAP3O95886 979 aa12.8□□□□□ -0.36
VRK3-209ENST00000594948 CKBP12277 381 aa12.8□□□□□ -0.36
VRK3-209ENST00000594948 COX7A2P14406 83 aa12.8□□□□□ -0.36
VRK3-209ENST00000594948 GABRB1P18505 474 aa12.8□□□□□ -0.36
VRK3-209ENST00000594948 CASP3P42574 277 aa12.8□□□□□ -0.36
VRK3-209ENST00000594948 ASMTP46597 345 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms