RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 TTI1O43156 1089 aa22.31■■□□□ 1.16
LSM4-204ENST00000594828 HPP00738 406 aa22.31■■□□□ 1.16
LSM4-204ENST00000594828 ITGA8P53708 1063 aa22.31■■□□□ 1.16
LSM4-204ENST00000594828 EMP2P54851 167 aa22.31■■□□□ 1.16
LSM4-204ENST00000594828 ARL4CP56559 192 aa22.31■■□□□ 1.16
LSM4-204ENST00000594828 NAE1Q13564 534 aa22.31■■□□□ 1.16
LSM4-204ENST00000594828 FAM53BQ14153 422 aa22.31■■□□□ 1.16
LSM4-204ENST00000594828 HECTD2Q5U5R9 776 aa22.31■■□□□ 1.16
LSM4-204ENST00000594828 TRMT10BQ6PF06 316 aaKnown RBP22.31■■□□□ 1.16
LSM4-204ENST00000594828 MBOAT1Q6ZNC8 495 aa22.31■■□□□ 1.16
LSM4-204ENST00000594828 Q6ZS92 163 aa22.31■■□□□ 1.16
LSM4-204ENST00000594828 ARHGEF39Q8N4T4 335 aa22.31■■□□□ 1.16
LSM4-204ENST00000594828 AMER3Q8N944 861 aa22.31■■□□□ 1.16
LSM4-204ENST00000594828 GPATCH11Q8N954 259 aa22.31■■□□□ 1.16
LSM4-204ENST00000594828 ALKBH8Q96BT7 664 aaKnown RBP22.31■■□□□ 1.16
LSM4-204ENST00000594828 C8orf44Q96CB5 159 aa22.31■■□□□ 1.16
LSM4-204ENST00000594828 SNRNP40Q96DI7 357 aaKnown RBP22.31■■□□□ 1.16
LSM4-204ENST00000594828 SNF8Q96H20 258 aa22.31■■□□□ 1.16
LSM4-204ENST00000594828 MESP1Q9BRJ9 268 aa22.31■■□□□ 1.16
LSM4-204ENST00000594828 SLC29A3Q9BZD2 475 aa22.31■■□□□ 1.16
LSM4-204ENST00000594828 MKKSQ9NPJ1 570 aaPredicted RBP22.31■■□□□ 1.16
LSM4-204ENST00000594828 CORO1CQ9ULV4 474 aaPredicted RBP22.31■■□□□ 1.16
LSM4-204ENST00000594828 VWA7Q9Y334 891 aa22.31■■□□□ 1.16
LSM4-204ENST00000594828 KCNE1BA0A087WTH5 132 aa22.3■■□□□ 1.16
LSM4-204ENST00000594828 IDSB3KWA1 339 aa22.3■■□□□ 1.16
LSM4-204ENST00000594828 TCP11X1B4DZS4 312 aa22.3■■□□□ 1.16
LSM4-204ENST00000594828 CCND1P24385 295 aa22.3■■□□□ 1.16
LSM4-204ENST00000594828 CXCR2P25025 360 aa22.3■■□□□ 1.16
LSM4-204ENST00000594828 RPS15AP62244 130 aaKnown RBP22.3■■□□□ 1.16
LSM4-204ENST00000594828 Q0VFX4 171 aa22.3■■□□□ 1.16
LSM4-204ENST00000594828 PHKG1Q16816 387 aa22.3■■□□□ 1.16
LSM4-204ENST00000594828 FHL5Q5TD97 284 aa22.3■■□□□ 1.16
LSM4-204ENST00000594828 STEAP4Q687X5 459 aa22.3■■□□□ 1.16
LSM4-204ENST00000594828 C17orf64Q86WR6 236 aa22.3■■□□□ 1.16
LSM4-204ENST00000594828 CISD2Q8N5K1 135 aaKnown RBP22.3■■□□□ 1.16
LSM4-204ENST00000594828 C19orf60Q96EN9 201 aa22.3■■□□□ 1.16
LSM4-204ENST00000594828 PDLIM2Q96JY6 352 aa22.3■■□□□ 1.16
LSM4-204ENST00000594828 WDR83Q9BRX9 315 aaKnown RBP22.3■■□□□ 1.16
LSM4-204ENST00000594828 TRIM31Q9BZY9 425 aa22.3■■□□□ 1.16
LSM4-204ENST00000594828 TGIF2Q9GZN2 237 aa22.3■■□□□ 1.16
LSM4-204ENST00000594828 ZNF160Q9HCG1 818 aa22.3■■□□□ 1.16
LSM4-204ENST00000594828 C14orf105Q9NVL8 296 aa22.3■■□□□ 1.16
LSM4-204ENST00000594828 MDC1Q14676 2089 aaKnown RBP22.29■■□□□ 1.16
LSM4-204ENST00000594828 PABPN1LA6NDY0 278 aaKnown RBP22.29■■□□□ 1.16
LSM4-204ENST00000594828 SEC31AO94979 1220 aaKnown RBP22.29■■□□□ 1.16
LSM4-204ENST00000594828 TSPAN12O95859 305 aa22.29■■□□□ 1.16
LSM4-204ENST00000594828 STATHP02808 62 aa22.29■■□□□ 1.16
LSM4-204ENST00000594828 HEXBP07686 556 aa22.29■■□□□ 1.16
LSM4-204ENST00000594828 AVPR1BP47901 424 aa22.29■■□□□ 1.16
LSM4-204ENST00000594828 CSNK1G2P78368 415 aa22.29■■□□□ 1.16
LSM4-204ENST00000594828 FAM45BPQ6NSW5 357 aa22.29■■□□□ 1.16
LSM4-204ENST00000594828 IGFL2Q6UWQ7 119 aa22.29■■□□□ 1.16
LSM4-204ENST00000594828 FAM45AQ8TCE6 357 aa22.29■■□□□ 1.16
LSM4-204ENST00000594828 THAP11Q96EK4 314 aa22.29■■□□□ 1.16
LSM4-204ENST00000594828 SGPP1Q9BX95 441 aa22.29■■□□□ 1.16
LSM4-204ENST00000594828 TRIM54Q9BYV2 358 aa22.29■■□□□ 1.16
LSM4-204ENST00000594828 RNF14Q9UBS8 474 aa22.29■■□□□ 1.16
LSM4-204ENST00000594828 PYCARDQ9ULZ3 195 aa22.29■■□□□ 1.16
LSM4-204ENST00000594828 EFCAB8A8MWE9 144 aa22.28■■□□□ 1.16
LSM4-204ENST00000594828 FDXRP22570 491 aa22.28■■□□□ 1.16
LSM4-204ENST00000594828 GLRBP48167 497 aa22.28■■□□□ 1.16
LSM4-204ENST00000594828 PGGT1BP53609 377 aa22.28■■□□□ 1.16
LSM4-204ENST00000594828 SYT16Q17RD7 645 aa22.28■■□□□ 1.16
LSM4-204ENST00000594828 LCTLQ6UWM7 567 aa22.28■■□□□ 1.16
LSM4-204ENST00000594828 NDUFAF7Q7L592 441 aa22.28■■□□□ 1.16
LSM4-204ENST00000594828 VN1R4Q7Z5H5 301 aa22.28■■□□□ 1.16
LSM4-204ENST00000594828 CUZD1Q86UP6 607 aa22.28■■□□□ 1.16
LSM4-204ENST00000594828 ANKMY2Q8IV38 441 aa22.28■■□□□ 1.16
LSM4-204ENST00000594828 PPP4R1Q8TF05 950 aa22.28■■□□□ 1.16
LSM4-204ENST00000594828 OLFM1Q99784 485 aa22.28■■□□□ 1.16
LSM4-204ENST00000594828 WDR77Q9BQA1 342 aaPredicted RBP22.28■■□□□ 1.16
LSM4-204ENST00000594828 ASF1BQ9NVP2 202 aa22.28■■□□□ 1.16
LSM4-204ENST00000594828 ARL15Q9NXU5 204 aa22.28■■□□□ 1.16
LSM4-204ENST00000594828 SH2B3Q9UQQ2 575 aa22.28■■□□□ 1.16
LSM4-204ENST00000594828 MRPS2Q9Y399 296 aaKnown RBP22.28■■□□□ 1.16
LSM4-204ENST00000594828 NSG1A0A0A6YYJ2 146 aa22.27■■□□□ 1.16
LSM4-204ENST00000594828 CYSRT1A8MQ03 144 aa22.27■■□□□ 1.16
LSM4-204ENST00000594828 H0YIG0 161 aa22.27■■□□□ 1.16
LSM4-204ENST00000594828 AGFG2O95081 481 aa22.27■■□□□ 1.16
LSM4-204ENST00000594828 NPPBP16860 134 aa22.27■■□□□ 1.16
LSM4-204ENST00000594828 GRK3P35626 688 aa22.27■■□□□ 1.16
LSM4-204ENST00000594828 MAT1AQ00266 395 aaKnown RBP22.27■■□□□ 1.16
LSM4-204ENST00000594828 PDIA2Q13087 525 aaKnown RBP22.27■■□□□ 1.16
LSM4-204ENST00000594828 FRG1Q14331 258 aaKnown RBP22.27■■□□□ 1.16
LSM4-204ENST00000594828 DUPD1Q68J44 220 aa22.27■■□□□ 1.16
LSM4-204ENST00000594828 FAAH2Q6GMR7 532 aa22.27■■□□□ 1.16
LSM4-204ENST00000594828 CAPN13Q6MZZ7 669 aaPredicted RBP22.27■■□□□ 1.16
LSM4-204ENST00000594828 KBTBD2Q8IY47 623 aa22.27■■□□□ 1.16
LSM4-204ENST00000594828 CAMKVQ8NCB2 501 aa22.27■■□□□ 1.16
LSM4-204ENST00000594828 OR9A4Q8NGU2 314 aa22.27■■□□□ 1.16
LSM4-204ENST00000594828 DNAJB14Q8TBM8 379 aa22.27■■□□□ 1.16
LSM4-204ENST00000594828 MACROD1Q9BQ69 325 aa22.27■■□□□ 1.16
LSM4-204ENST00000594828 HAUS8Q9BT25 410 aa22.27■■□□□ 1.16
LSM4-204ENST00000594828 EPS8L2Q9H6S3 715 aa22.27■■□□□ 1.16
LSM4-204ENST00000594828 ZFATQ9P243 1243 aa22.27■■□□□ 1.16
LSM4-204ENST00000594828 CSAG2Q9Y5P2 127 aa22.27■■□□□ 1.16
LSM4-204ENST00000594828 COPG1Q9Y678 874 aaKnown RBP22.27■■□□□ 1.16
LSM4-204ENST00000594828 SHANK1Q9Y566 2161 aa22.26■■□□□ 1.15
LSM4-204ENST00000594828 FLNCQ14315 2725 aa22.26■■□□□ 1.15
LSM4-204ENST00000594828 FEZF1A0PJY2 475 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms