RNA–Protein interactions for RNA: ENST00000592822.1

TPM4-216, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-216ENST00000592822 ZCCHC14Q8WYQ9 949 aaKnown RBP9.51□□□□□ -0.89
TPM4-216ENST00000592822 PHF21BQ96EK2 531 aa9.51□□□□□ -0.89
TPM4-216ENST00000592822 CAPS2Q9BXY5 557 aa9.51□□□□□ -0.89
TPM4-216ENST00000592822 PELI2Q9HAT8 420 aa9.51□□□□□ -0.89
TPM4-216ENST00000592822 MKS1Q9NXB0 559 aa9.51□□□□□ -0.89
TPM4-216ENST00000592822 GPRC5BQ9NZH0 403 aa9.51□□□□□ -0.89
TPM4-216ENST00000592822 OPTCQ9UBM4 332 aa9.51□□□□□ -0.89
TPM4-216ENST00000592822 GRID1Q9ULK0 1009 aa9.51□□□□□ -0.89
TPM4-216ENST00000592822 PCDHB3Q9Y5E6 796 aa9.51□□□□□ -0.89
TPM4-216ENST00000592822 TNPO3Q9Y5L0 923 aaKnown RBP9.51□□□□□ -0.89
TPM4-216ENST00000592822 CELSR3Q9NYQ7 3312 aa9.51□□□□□ -0.89
TPM4-216ENST00000592822 ANKRD11Q6UB99 2663 aaPredicted RBP9.51□□□□□ -0.89
TPM4-216ENST00000592822 ZZEF1O43149 2961 aa9.51□□□□□ -0.89
TPM4-216ENST00000592822 FER1L5A0AVI2 2057 aa9.51□□□□□ -0.89
TPM4-216ENST00000592822 MAP1BP46821 2468 aaKnown RBP9.5□□□□□ -0.89
TPM4-216ENST00000592822 TRBC2A0A5B9 178 aa9.5□□□□□ -0.89
TPM4-216ENST00000592822 G3V2L1 256 aa9.5□□□□□ -0.89
TPM4-216ENST00000592822 STMND1H3BQB6 276 aa9.5□□□□□ -0.89
TPM4-216ENST00000592822 E2F3O00716 465 aa9.5□□□□□ -0.89
TPM4-216ENST00000592822 CLGNO14967 610 aa9.5□□□□□ -0.89
TPM4-216ENST00000592822 ZSCAN9O15535 394 aaPredicted RBP9.5□□□□□ -0.89
TPM4-216ENST00000592822 P2RX6O15547 441 aa9.5□□□□□ -0.89
TPM4-216ENST00000592822 DLX3O60479 287 aa9.5□□□□□ -0.89
TPM4-216ENST00000592822 PLIN3O60664 434 aa9.5□□□□□ -0.89
TPM4-216ENST00000592822 RAD1O60671 282 aa9.5□□□□□ -0.89
TPM4-216ENST00000592822 SPAG7O75391 227 aa9.5□□□□□ -0.89
TPM4-216ENST00000592822 MED26O95402 600 aa9.5□□□□□ -0.89
TPM4-216ENST00000592822 EIF2S1P05198 315 aaKnown RBP9.5□□□□□ -0.89
TPM4-216ENST00000592822 C1GALT1C1LP0DN25 315 aa9.5□□□□□ -0.89
TPM4-216ENST00000592822 CD22P20273 847 aa9.5□□□□□ -0.89
TPM4-216ENST00000592822 EEF1DP29692 281 aaKnown RBP9.5□□□□□ -0.89
TPM4-216ENST00000592822 RPS15AP62244 130 aaKnown RBP9.5□□□□□ -0.89
TPM4-216ENST00000592822 NFKB2Q00653 900 aa9.5□□□□□ -0.89
TPM4-216ENST00000592822 REEP5Q00765 189 aa9.5□□□□□ -0.89
TPM4-216ENST00000592822 GPS2Q13227 327 aa9.5□□□□□ -0.89
TPM4-216ENST00000592822 CLN3Q13286 438 aa9.5□□□□□ -0.89
TPM4-216ENST00000592822 GTF2H2Q13888 395 aa9.5□□□□□ -0.89
TPM4-216ENST00000592822 DOC2AQ14183 400 aa9.5□□□□□ -0.89
TPM4-216ENST00000592822 PRTGQ2VWP7 1150 aa9.5□□□□□ -0.89
TPM4-216ENST00000592822 TCTE1Q5JU00 501 aa9.5□□□□□ -0.89
TPM4-216ENST00000592822 GTF2H2CQ6P1K8 395 aa9.5□□□□□ -0.89
TPM4-216ENST00000592822 METTL2BQ6P1Q9 378 aaKnown RBP9.5□□□□□ -0.89
TPM4-216ENST00000592822 TLDC1Q6P9B6 456 aa9.5□□□□□ -0.89
TPM4-216ENST00000592822 VN1R4Q7Z5H5 301 aa9.5□□□□□ -0.89
TPM4-216ENST00000592822 CROCCP2Q86T23 111 aa9.5□□□□□ -0.89
TPM4-216ENST00000592822 PROSER1Q86XN7 944 aa9.5□□□□□ -0.89
TPM4-216ENST00000592822 ZNF655Q8N720 491 aaPredicted RBP9.5□□□□□ -0.89
TPM4-216ENST00000592822 MFSD9Q8NBP5 474 aa9.5□□□□□ -0.89
TPM4-216ENST00000592822 GALNT6Q8NCL4 622 aa9.5□□□□□ -0.89
TPM4-216ENST00000592822 NKD1Q969G9 470 aa9.5□□□□□ -0.89
TPM4-216ENST00000592822 TM4SF19Q96DZ7 209 aa9.5□□□□□ -0.89
TPM4-216ENST00000592822 WDR34Q96EX3 536 aa9.5□□□□□ -0.89
TPM4-216ENST00000592822 PGM2Q96G03 612 aa9.5□□□□□ -0.89
TPM4-216ENST00000592822 NAF1Q96HR8 494 aaKnown RBP9.5□□□□□ -0.89
TPM4-216ENST00000592822 APOPT1Q96IL0 206 aa9.5□□□□□ -0.89
TPM4-216ENST00000592822 CNTNAP3BQ96NU0 1288 aa9.5□□□□□ -0.89
TPM4-216ENST00000592822 SARGQ9BW04 601 aa9.5□□□□□ -0.89
TPM4-216ENST00000592822 CNTNAP3Q9BZ76 1288 aa9.5□□□□□ -0.89
TPM4-216ENST00000592822 CENPHQ9H3R5 247 aa9.5□□□□□ -0.89
TPM4-216ENST00000592822 EHD1Q9H4M9 534 aa9.5□□□□□ -0.89
TPM4-216ENST00000592822 ACTR5Q9H9F9 607 aaPredicted RBP9.5□□□□□ -0.89
TPM4-216ENST00000592822 AKIRIN1Q9H9L7 192 aaPredicted RBP9.5□□□□□ -0.89
TPM4-216ENST00000592822 IRAK4Q9NWZ3 460 aa9.5□□□□□ -0.89
TPM4-216ENST00000592822 GEMIN8Q9NWZ8 242 aaKnown RBP9.5□□□□□ -0.89
TPM4-216ENST00000592822 RAXQ9Y2V3 346 aa9.5□□□□□ -0.89
TPM4-216ENST00000592822 PLLPQ9Y342 182 aa9.5□□□□□ -0.89
TPM4-216ENST00000592822 PCDHGA4Q9Y5G9 962 aa9.5□□□□□ -0.89
TPM4-216ENST00000592822 AP1M2Q9Y6Q5 423 aa9.5□□□□□ -0.89
TPM4-216ENST00000592822 SEC16AO15027 2179 aa9.5□□□□□ -0.89
TPM4-216ENST00000592822 URB1O60287 2271 aaKnown RBP9.49□□□□□ -0.89
TPM4-216ENST00000592822 CFAP47Q6ZTR5 3102 aa9.49□□□□□ -0.89
TPM4-216ENST00000592822 HYKKA2RU49 373 aa9.49□□□□□ -0.89
TPM4-216ENST00000592822 FITM1A5D6W6 292 aa9.49□□□□□ -0.89
TPM4-216ENST00000592822 OR1F1O43749 312 aa9.49□□□□□ -0.89
TPM4-216ENST00000592822 CPNE3O75131 537 aaKnown RBP9.49□□□□□ -0.89
TPM4-216ENST00000592822 H2AFYO75367 372 aaKnown RBP9.49□□□□□ -0.89
TPM4-216ENST00000592822 WFS1O76024 890 aa9.49□□□□□ -0.89
TPM4-216ENST00000592822 STATHP02808 62 aa9.49□□□□□ -0.89
TPM4-216ENST00000592822 RPS17P08708 135 aaKnown RBP9.49□□□□□ -0.89
TPM4-216ENST00000592822 ATXN8OSP0DMR3 200 aa9.49□□□□□ -0.89
TPM4-216ENST00000592822 LIPCP11150 499 aa9.49□□□□□ -0.89
TPM4-216ENST00000592822 EPB42P16452 691 aa9.49□□□□□ -0.89
TPM4-216ENST00000592822 TAC1P20366 129 aa9.49□□□□□ -0.89
TPM4-216ENST00000592822 ATP5F1P24539 256 aaPredicted RBP9.49□□□□□ -0.89
TPM4-216ENST00000592822 RORAP35398 523 aa9.49□□□□□ -0.89
TPM4-216ENST00000592822 GRK3P35626 688 aa9.49□□□□□ -0.89
TPM4-216ENST00000592822 EIF2S3P41091 472 aaKnown RBP9.49□□□□□ -0.89
TPM4-216ENST00000592822 CASP2P42575 452 aa9.49□□□□□ -0.89
TPM4-216ENST00000592822 SCTRP47872 440 aa9.49□□□□□ -0.89
TPM4-216ENST00000592822 PRKAA2P54646 552 aa9.49□□□□□ -0.89
TPM4-216ENST00000592822 IRF8Q02556 426 aa9.49□□□□□ -0.89
TPM4-216ENST00000592822 PCDH1Q08174 1060 aa9.49□□□□□ -0.89
TPM4-216ENST00000592822 CHIT1Q13231 466 aa9.49□□□□□ -0.89
TPM4-216ENST00000592822 E2F2Q14209 437 aa9.49□□□□□ -0.89
TPM4-216ENST00000592822 MAP7Q14244 749 aa9.49□□□□□ -0.89
TPM4-216ENST00000592822 SLBPQ14493 270 aaKnown RBP eCLIP9.49□□□□□ -0.89
TPM4-216ENST00000592822 GRM7Q14831 915 aa9.49□□□□□ -0.89
TPM4-216ENST00000592822 TBCCQ15814 346 aa9.49□□□□□ -0.89
TPM4-216ENST00000592822 HKDC1Q2TB90 917 aa9.49□□□□□ -0.89
TPM4-216ENST00000592822 CCDC153Q494R4 210 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms