RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 NDUFA9Q16795 377 aa11.51□□□□□ -0.57
TPM4-212ENST00000590180 COLEC12Q5KU26 742 aa11.51□□□□□ -0.57
TPM4-212ENST00000590180 GARNL3Q5VVW2 1013 aa11.51□□□□□ -0.57
TPM4-212ENST00000590180 COX15Q7KZN9 410 aa11.51□□□□□ -0.57
TPM4-212ENST00000590180 PPP1R32Q7Z5V6 425 aa11.51□□□□□ -0.57
TPM4-212ENST00000590180 MRGPREQ86SM8 312 aa11.51□□□□□ -0.57
TPM4-212ENST00000590180 SPATA6LQ8N4H0 392 aa11.51□□□□□ -0.57
TPM4-212ENST00000590180 OR56A3Q8NH54 315 aa11.51□□□□□ -0.57
TPM4-212ENST00000590180 FBF1Q8TES7 1133 aa11.51□□□□□ -0.57
TPM4-212ENST00000590180 ANKRD49Q8WVL7 239 aa11.51□□□□□ -0.57
TPM4-212ENST00000590180 ANKRD7Q92527 254 aa11.51□□□□□ -0.57
TPM4-212ENST00000590180 MIEF2Q96C03 454 aa11.51□□□□□ -0.57
TPM4-212ENST00000590180 TRIM44Q96DX7 344 aaPredicted RBP11.51□□□□□ -0.57
TPM4-212ENST00000590180 THAP11Q96EK4 314 aa11.51□□□□□ -0.57
TPM4-212ENST00000590180 MMABQ96EY8 250 aaPredicted RBP11.51□□□□□ -0.57
TPM4-212ENST00000590180 C10orf90Q96M02 699 aa11.51□□□□□ -0.57
TPM4-212ENST00000590180 EGFL8Q99944 293 aa11.51□□□□□ -0.57
TPM4-212ENST00000590180 MACROD1Q9BQ69 325 aa11.51□□□□□ -0.57
TPM4-212ENST00000590180 SGPP1Q9BX95 441 aa11.51□□□□□ -0.57
TPM4-212ENST00000590180 TRIM4Q9C037 500 aa11.51□□□□□ -0.57
TPM4-212ENST00000590180 UNKQ9C0B0 810 aaKnown RBP11.51□□□□□ -0.57
TPM4-212ENST00000590180 WDR54Q9H977 334 aa11.51□□□□□ -0.57
TPM4-212ENST00000590180 SYNPO2LQ9H987 977 aa11.51□□□□□ -0.57
TPM4-212ENST00000590180 CAB39LQ9H9S4 337 aa11.51□□□□□ -0.57
TPM4-212ENST00000590180 CTSFQ9UBX1 484 aa11.51□□□□□ -0.57
TPM4-212ENST00000590180 ZNF282Q9UDV7 671 aaPredicted RBP11.51□□□□□ -0.57
TPM4-212ENST00000590180 ANAPC2Q9UJX6 822 aa11.51□□□□□ -0.57
TPM4-212ENST00000590180 NXT1Q9UKK6 140 aaKnown RBP11.51□□□□□ -0.57
TPM4-212ENST00000590180 NOVA2Q9UNW9 492 aaKnown RBP11.51□□□□□ -0.57
TPM4-212ENST00000590180 SH2B3Q9UQQ2 575 aa11.51□□□□□ -0.57
TPM4-212ENST00000590180 RP1L1Q8IWN7 2480 aaPredicted RBP11.5□□□□□ -0.57
TPM4-212ENST00000590180 A0A0A6YYC8 382 aaPredicted RBP11.5□□□□□ -0.57
TPM4-212ENST00000590180 CTAGE15A4D2H0 777 aa11.5□□□□□ -0.57
TPM4-212ENST00000590180 I3L1I5 382 aaPredicted RBP11.5□□□□□ -0.57
TPM4-212ENST00000590180 KIF2AO00139 706 aaPredicted RBP11.5□□□□□ -0.57
TPM4-212ENST00000590180 FFAR3O14843 346 aa11.5□□□□□ -0.57
TPM4-212ENST00000590180 GPR42O15529 346 aa11.5□□□□□ -0.57
TPM4-212ENST00000590180 PRPF4O43172 522 aaKnown RBP eCLIP11.5□□□□□ -0.57
TPM4-212ENST00000590180 PHGDHO43175 533 aaKnown RBP11.5□□□□□ -0.57
TPM4-212ENST00000590180 LCMT2O60294 686 aaKnown RBP11.5□□□□□ -0.57
TPM4-212ENST00000590180 FAM155BO75949 473 aa11.5□□□□□ -0.57
TPM4-212ENST00000590180 CTAGE8P0CG41 777 aa11.5□□□□□ -0.57
TPM4-212ENST00000590180 CCDC166P0CW27 439 aa11.5□□□□□ -0.57
TPM4-212ENST00000590180 STMN1P16949 149 aa11.5□□□□□ -0.57
TPM4-212ENST00000590180 STX2P32856 288 aa11.5□□□□□ -0.57
TPM4-212ENST00000590180 AVPR1BP47901 424 aa11.5□□□□□ -0.57
TPM4-212ENST00000590180 CCR8P51685 355 aa11.5□□□□□ -0.57
TPM4-212ENST00000590180 MEF2AQ02078 507 aaPredicted RBP11.5□□□□□ -0.57
TPM4-212ENST00000590180 CSHL1Q14406 222 aa11.5□□□□□ -0.57
TPM4-212ENST00000590180 TSNQ15631 228 aaKnown RBP11.5□□□□□ -0.57
TPM4-212ENST00000590180 RBBP7Q16576 425 aa11.5□□□□□ -0.57
TPM4-212ENST00000590180 ZXDCQ2QGD7 858 aaPredicted RBP11.5□□□□□ -0.57
TPM4-212ENST00000590180 KBTBD12Q3ZCT8 623 aa11.5□□□□□ -0.57
TPM4-212ENST00000590180 VWA2Q5GFL6 755 aa11.5□□□□□ -0.57
TPM4-212ENST00000590180 GRTP1Q5TC63 336 aa11.5□□□□□ -0.57
TPM4-212ENST00000590180 SBSNQ6UWP8 590 aa11.5□□□□□ -0.57
TPM4-212ENST00000590180 FRA10AC1Q70Z53 315 aa11.5□□□□□ -0.57
TPM4-212ENST00000590180 CTAGE6Q86UF2 777 aa11.5□□□□□ -0.57
TPM4-212ENST00000590180 CTAGE4Q8IX94 777 aa11.5□□□□□ -0.57
TPM4-212ENST00000590180 MMGT1Q8N4V1 131 aa11.5□□□□□ -0.57
TPM4-212ENST00000590180 CAMKVQ8NCB2 501 aa11.5□□□□□ -0.57
TPM4-212ENST00000590180 FDCSPQ8NFU4 85 aa11.5□□□□□ -0.57
TPM4-212ENST00000590180 KIF18AQ8NI77 898 aa11.5□□□□□ -0.57
TPM4-212ENST00000590180 STT3BQ8TCJ2 826 aa11.5□□□□□ -0.57
TPM4-212ENST00000590180 IFT81Q8WYA0 676 aa11.5□□□□□ -0.57
TPM4-212ENST00000590180 MRRFQ96E11 262 aaKnown RBP11.5□□□□□ -0.57
TPM4-212ENST00000590180 RBBP8Q99708 897 aa11.5□□□□□ -0.57
TPM4-212ENST00000590180 MCMBPQ9BTE3 642 aa11.5□□□□□ -0.57
TPM4-212ENST00000590180 CRB3Q9BUF7 120 aa11.5□□□□□ -0.57
TPM4-212ENST00000590180 PHACTR1Q9C0D0 580 aa11.5□□□□□ -0.57
TPM4-212ENST00000590180 SLC26A1Q9H2B4 701 aa11.5□□□□□ -0.57
TPM4-212ENST00000590180 POPDC3Q9HBV1 291 aa11.5□□□□□ -0.57
TPM4-212ENST00000590180 ATP13A2Q9NQ11 1180 aa11.5□□□□□ -0.57
TPM4-212ENST00000590180 TRPC4Q9UBN4 977 aa11.5□□□□□ -0.57
TPM4-212ENST00000590180 DYRK1BQ9Y463 629 aa11.5□□□□□ -0.57
TPM4-212ENST00000590180 MDC1Q14676 2089 aaKnown RBP11.5□□□□□ -0.57
TPM4-212ENST00000590180 CNTRLQ7Z7A1 2325 aa11.49□□□□□ -0.57
TPM4-212ENST00000590180 KCNE1BA0A087WTH5 132 aa11.49□□□□□ -0.57
TPM4-212ENST00000590180 NCF1BA6NI72 391 aaPredicted RBP11.49□□□□□ -0.57
TPM4-212ENST00000590180 VSTM2BA6NLU5 285 aa11.49□□□□□ -0.57
TPM4-212ENST00000590180 NCF1CA8MVU1 366 aaPredicted RBP11.49□□□□□ -0.57
TPM4-212ENST00000590180 AGPSO00116 658 aa11.49□□□□□ -0.57
TPM4-212ENST00000590180 MASP2O00187 686 aa11.49□□□□□ -0.57
TPM4-212ENST00000590180 P2RX6O15547 441 aa11.49□□□□□ -0.57
TPM4-212ENST00000590180 OR1F1O43749 312 aa11.49□□□□□ -0.57
TPM4-212ENST00000590180 PDGFAP04085 211 aa11.49□□□□□ -0.57
TPM4-212ENST00000590180 SERPIND1P05546 499 aa11.49□□□□□ -0.57
TPM4-212ENST00000590180 ZGLP1P0C6A0 271 aa11.49□□□□□ -0.57
TPM4-212ENST00000590180 NCF1P14598 390 aaPredicted RBP11.49□□□□□ -0.57
TPM4-212ENST00000590180 MMP11P24347 488 aa11.49□□□□□ -0.57
TPM4-212ENST00000590180 EMP2P54851 167 aa11.49□□□□□ -0.57
TPM4-212ENST00000590180 KLC1Q07866 573 aa11.49□□□□□ -0.57
TPM4-212ENST00000590180 DCAF10Q5QP82 559 aa11.49□□□□□ -0.57
TPM4-212ENST00000590180 CATSPEREQ5SY80 951 aa11.49□□□□□ -0.57
TPM4-212ENST00000590180 RAPH1Q70E73 1250 aa11.49□□□□□ -0.57
TPM4-212ENST00000590180 ADAMTSL2Q86TH1 951 aa11.49□□□□□ -0.57
TPM4-212ENST00000590180 ASPGQ86U10 573 aa11.49□□□□□ -0.57
TPM4-212ENST00000590180 THOC6Q86W42 341 aaKnown RBP11.49□□□□□ -0.57
TPM4-212ENST00000590180 TBC1D19Q8N5T2 526 aa11.49□□□□□ -0.57
TPM4-212ENST00000590180 MFSD9Q8NBP5 474 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms