RNA–Protein interactions for RNA: ENST00000588344.2

CIRBP-218, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 370 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-218ENST00000588344 SRPK3Q9UPE1 567 aa8.69□□□□□ -1.02
CIRBP-218ENST00000588344 PCDHB3Q9Y5E6 796 aa8.69□□□□□ -1.02
CIRBP-218ENST00000588344 PCDHGA11Q9Y5H2 935 aa8.69□□□□□ -1.02
CIRBP-218ENST00000588344 SPEGQ15772 3267 aa8.69□□□□□ -1.02
CIRBP-218ENST00000588344 TP53BP1Q12888 1972 aaPredicted RBP8.69□□□□□ -1.02
CIRBP-218ENST00000588344 PIKFYVEQ9Y2I7 2098 aa8.69□□□□□ -1.02
CIRBP-218ENST00000588344 GOLGA4Q13439 2230 aaKnown RBP8.69□□□□□ -1.02
CIRBP-218ENST00000588344 A0A1W2PNU3 283 aaPredicted RBP8.68□□□□□ -1.02
CIRBP-218ENST00000588344 FITM1A5D6W6 292 aa8.68□□□□□ -1.02
CIRBP-218ENST00000588344 TMEM8BA6NDV4 472 aa8.68□□□□□ -1.02
CIRBP-218ENST00000588344 URADA6NGE7 173 aa8.68□□□□□ -1.02
CIRBP-218ENST00000588344 ANKDD1BA6NHY2 528 aa8.68□□□□□ -1.02
CIRBP-218ENST00000588344 FOXO6A8MYZ6 492 aa8.68□□□□□ -1.02
CIRBP-218ENST00000588344 HMGB1P1B2RPK0 211 aaPredicted RBP8.68□□□□□ -1.02
CIRBP-218ENST00000588344 TMEM150CB9EJG8 249 aa8.68□□□□□ -1.02
CIRBP-218ENST00000588344 C9orf172C9J069 976 aa8.68□□□□□ -1.02
CIRBP-218ENST00000588344 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.68□□□□□ -1.02
CIRBP-218ENST00000588344 G3V2L1 256 aa8.68□□□□□ -1.02
CIRBP-218ENST00000588344 STMND1H3BQB6 276 aa8.68□□□□□ -1.02
CIRBP-218ENST00000588344 AGPSO00116 658 aa8.68□□□□□ -1.02
CIRBP-218ENST00000588344 BIRC5O15392 142 aa8.68□□□□□ -1.02
CIRBP-218ENST00000588344 OR1F1O43749 312 aa8.68□□□□□ -1.02
CIRBP-218ENST00000588344 TRIM13O60858 407 aa8.68□□□□□ -1.02
CIRBP-218ENST00000588344 CTSVO60911 334 aa8.68□□□□□ -1.02
CIRBP-218ENST00000588344 SCRG1O75711 98 aa8.68□□□□□ -1.02
CIRBP-218ENST00000588344 SNUPNO95149 360 aaKnown RBP8.68□□□□□ -1.02
CIRBP-218ENST00000588344 CD63P08962 238 aa8.68□□□□□ -1.02
CIRBP-218ENST00000588344 SBK3P0C264 359 aa8.68□□□□□ -1.02
CIRBP-218ENST00000588344 SLC35G6P0C7Q6 338 aa8.68□□□□□ -1.02
CIRBP-218ENST00000588344 CCNYL3P0C7X3 344 aa8.68□□□□□ -1.02
CIRBP-218ENST00000588344 PIM1P11309 404 aaPredicted RBP8.68□□□□□ -1.02
CIRBP-218ENST00000588344 ITIH1P19827 911 aa8.68□□□□□ -1.02
CIRBP-218ENST00000588344 SERPINB5P36952 375 aa8.68□□□□□ -1.02
CIRBP-218ENST00000588344 GABRA4P48169 554 aa8.68□□□□□ -1.02
CIRBP-218ENST00000588344 AGTR2P50052 363 aa8.68□□□□□ -1.02
CIRBP-218ENST00000588344 CLCQ05315 142 aa8.68□□□□□ -1.02
CIRBP-218ENST00000588344 GPS2Q13227 327 aa8.68□□□□□ -1.02
CIRBP-218ENST00000588344 GPR19Q15760 415 aa8.68□□□□□ -1.02
CIRBP-218ENST00000588344 NDUFA9Q16795 377 aa8.68□□□□□ -1.02
CIRBP-218ENST00000588344 TBC1D25Q3MII6 688 aa8.68□□□□□ -1.02
CIRBP-218ENST00000588344 XKR6Q5GH73 641 aa8.68□□□□□ -1.02
CIRBP-218ENST00000588344 CFAP157Q5JU67 520 aa8.68□□□□□ -1.02
CIRBP-218ENST00000588344 WASHC2DQ5SRD0 308 aa8.68□□□□□ -1.02
CIRBP-218ENST00000588344 ZNF678Q5SXM1 525 aa8.68□□□□□ -1.02
CIRBP-218ENST00000588344 CATSPEREQ5SY80 951 aa8.68□□□□□ -1.02
CIRBP-218ENST00000588344 TMIGD1Q6UXZ0 262 aa8.68□□□□□ -1.02
CIRBP-218ENST00000588344 TMPRSS11BQ86T26 416 aa8.68□□□□□ -1.02
CIRBP-218ENST00000588344 TMEM126BQ8IUX1 230 aa8.68□□□□□ -1.02
CIRBP-218ENST00000588344 L3MBTL4Q8NA19 623 aa8.68□□□□□ -1.02
CIRBP-218ENST00000588344 TTC29Q8NA56 475 aaPredicted RBP8.68□□□□□ -1.02
CIRBP-218ENST00000588344 MFSD9Q8NBP5 474 aa8.68□□□□□ -1.02
CIRBP-218ENST00000588344 FGF11Q92914 225 aa8.68□□□□□ -1.02
CIRBP-218ENST00000588344 TLCD1Q96CP7 247 aa8.68□□□□□ -1.02
CIRBP-218ENST00000588344 FAM111AQ96PZ2 611 aa8.68□□□□□ -1.02
CIRBP-218ENST00000588344 SH3GL2Q99962 352 aa8.68□□□□□ -1.02
CIRBP-218ENST00000588344 C17orf62Q9BQA9 187 aa8.68□□□□□ -1.02
CIRBP-218ENST00000588344 NDC1Q9BTX1 674 aa8.68□□□□□ -1.02
CIRBP-218ENST00000588344 TRMOQ9BU70 441 aa8.68□□□□□ -1.02
CIRBP-218ENST00000588344 DRC3Q9H069 523 aa8.68□□□□□ -1.02
CIRBP-218ENST00000588344 CCDC86Q9H6F5 360 aaKnown RBP8.68□□□□□ -1.02
CIRBP-218ENST00000588344 ACTR8Q9H981 624 aa8.68□□□□□ -1.02
CIRBP-218ENST00000588344 KCNK9Q9NPC2 374 aa8.68□□□□□ -1.02
CIRBP-218ENST00000588344 ASCL3Q9NQ33 180 aa8.68□□□□□ -1.02
CIRBP-218ENST00000588344 CUEDC1Q9NWM3 386 aaPredicted RBP8.68□□□□□ -1.02
CIRBP-218ENST00000588344 IRAK4Q9NWZ3 460 aa8.68□□□□□ -1.02
CIRBP-218ENST00000588344 PSD3Q9NYI0 1048 aa8.68□□□□□ -1.02
CIRBP-218ENST00000588344 ZFP69BQ9UJL9 534 aa8.68□□□□□ -1.02
CIRBP-218ENST00000588344 PCTPQ9UKL6 214 aa8.68□□□□□ -1.02
CIRBP-218ENST00000588344 EMCNQ9ULC0 261 aa8.68□□□□□ -1.02
CIRBP-218ENST00000588344 CDC14AQ9UNH5 594 aa8.68□□□□□ -1.02
CIRBP-218ENST00000588344 KLHL20Q9Y2M5 609 aa8.68□□□□□ -1.02
CIRBP-218ENST00000588344 TSC22D4Q9Y3Q8 395 aa8.68□□□□□ -1.02
CIRBP-218ENST00000588344 TMEM184BQ9Y519 407 aaPredicted RBP8.68□□□□□ -1.02
CIRBP-218ENST00000588344 B3GALT1Q9Y5Z6 326 aa8.68□□□□□ -1.02
CIRBP-218ENST00000588344 A0A0J9YVX5 310 aa8.67□□□□□ -1.02
CIRBP-218ENST00000588344 MED19A0JLT2 244 aaPredicted RBP8.67□□□□□ -1.02
CIRBP-218ENST00000588344 CNOT1A5YKK6 2376 aaKnown RBP8.67□□□□□ -1.02
CIRBP-218ENST00000588344 H0YGG7 62 aa8.67□□□□□ -1.02
CIRBP-218ENST00000588344 H0YIV9 168 aa8.67□□□□□ -1.02
CIRBP-218ENST00000588344 H3BMH7 237 aa8.67□□□□□ -1.02
CIRBP-218ENST00000588344 HAT1O14929 419 aa8.67□□□□□ -1.02
CIRBP-218ENST00000588344 BRINP1O60477 761 aa8.67□□□□□ -1.02
CIRBP-218ENST00000588344 PRAMEF10O60809 474 aa8.67□□□□□ -1.02
CIRBP-218ENST00000588344 CPNE3O75131 537 aaKnown RBP8.67□□□□□ -1.02
CIRBP-218ENST00000588344 SPAG7O75391 227 aa8.67□□□□□ -1.02
CIRBP-218ENST00000588344 SUPT7LO94864 414 aa8.67□□□□□ -1.02
CIRBP-218ENST00000588344 SIX3O95343 332 aaPredicted RBP8.67□□□□□ -1.02
CIRBP-218ENST00000588344 CLDN9O95484 217 aa8.67□□□□□ -1.02
CIRBP-218ENST00000588344 KLK3P07288 261 aaPredicted RBP8.67□□□□□ -1.02
CIRBP-218ENST00000588344 RPS17P08708 135 aaKnown RBP8.67□□□□□ -1.02
CIRBP-218ENST00000588344 HGFP14210 728 aa8.67□□□□□ -1.02
CIRBP-218ENST00000588344 SPINK2P20155 84 aa8.67□□□□□ -1.02
CIRBP-218ENST00000588344 AGXTP21549 392 aa8.67□□□□□ -1.02
CIRBP-218ENST00000588344 SLC5A2P31639 672 aa8.67□□□□□ -1.02
CIRBP-218ENST00000588344 ETV5P41161 510 aa8.67□□□□□ -1.02
CIRBP-218ENST00000588344 SCTRP47872 440 aa8.67□□□□□ -1.02
CIRBP-218ENST00000588344 CCNG1P51959 295 aa8.67□□□□□ -1.02
CIRBP-218ENST00000588344 NAGLUP54802 743 aa8.67□□□□□ -1.02
CIRBP-218ENST00000588344 PKNOX1P55347 436 aa8.67□□□□□ -1.02
CIRBP-218ENST00000588344 VSX2P58304 361 aaPredicted RBP8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms