RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 EPHA4P54764 986 aa10.85□□□□□ -0.67
VMP1-207ENST00000588131 RPS13P62277 151 aaKnown RBP10.85□□□□□ -0.67
VMP1-207ENST00000588131 UBAP2LQ14157 1087 aaKnown RBP10.85□□□□□ -0.67
VMP1-207ENST00000588131 NR1D2Q14995 579 aa10.85□□□□□ -0.67
VMP1-207ENST00000588131 NR6A1Q15406 480 aa10.85□□□□□ -0.67
VMP1-207ENST00000588131 SF3A2Q15428 464 aaKnown RBP10.85□□□□□ -0.67
VMP1-207ENST00000588131 NR0B2Q15466 257 aa10.85□□□□□ -0.67
VMP1-207ENST00000588131 HIST2H2ACQ16777 129 aaPredicted RBP10.85□□□□□ -0.67
VMP1-207ENST00000588131 SLC5A12Q1EHB4 618 aa10.85□□□□□ -0.67
VMP1-207ENST00000588131 NKAIN2Q5VXU1 208 aa10.85□□□□□ -0.67
VMP1-207ENST00000588131 FCRL6Q6DN72 434 aa10.85□□□□□ -0.67
VMP1-207ENST00000588131 HIST2H2AA3Q6FI13 130 aa10.85□□□□□ -0.67
VMP1-207ENST00000588131 ARMC6Q6NXE6 501 aa10.85□□□□□ -0.67
VMP1-207ENST00000588131 C6orf89Q6UWU4 347 aa10.85□□□□□ -0.67
VMP1-207ENST00000588131 TMIGD1Q6UXZ0 262 aa10.85□□□□□ -0.67
VMP1-207ENST00000588131 PAQR7Q86WK9 346 aa10.85□□□□□ -0.67
VMP1-207ENST00000588131 KRT78Q8N1N4 520 aa10.85□□□□□ -0.67
VMP1-207ENST00000588131 FITM2Q8N6M3 262 aa10.85□□□□□ -0.67
VMP1-207ENST00000588131 ANKRD53Q8N9V6 530 aa10.85□□□□□ -0.67
VMP1-207ENST00000588131 FAM181AQ8N9Y4 354 aa10.85□□□□□ -0.67
VMP1-207ENST00000588131 HUS1BQ8NHY5 278 aa10.85□□□□□ -0.67
VMP1-207ENST00000588131 CCDC74AQ96AQ1 378 aa10.85□□□□□ -0.67
VMP1-207ENST00000588131 MTERF1Q99551 399 aaKnown RBP10.85□□□□□ -0.67
VMP1-207ENST00000588131 CCT7Q99832 543 aa10.85□□□□□ -0.67
VMP1-207ENST00000588131 PLCD4Q9BRC7 762 aa10.85□□□□□ -0.67
VMP1-207ENST00000588131 KLHL25Q9H0H3 589 aa10.85□□□□□ -0.67
VMP1-207ENST00000588131 ZNF385DQ9H6B1 395 aa10.85□□□□□ -0.67
VMP1-207ENST00000588131 NT5DC2Q9H857 520 aa10.85□□□□□ -0.67
VMP1-207ENST00000588131 DMRT3Q9NQL9 472 aa10.85□□□□□ -0.67
VMP1-207ENST00000588131 SAR1AQ9NR31 198 aa10.85□□□□□ -0.67
VMP1-207ENST00000588131 TMEM184CQ9NVA4 438 aa10.85□□□□□ -0.67
VMP1-207ENST00000588131 FAM86C1Q9NVL1 165 aa10.85□□□□□ -0.67
VMP1-207ENST00000588131 RIC8BQ9NVN3 520 aa10.85□□□□□ -0.67
VMP1-207ENST00000588131 POMT2Q9UKY4 750 aa10.85□□□□□ -0.67
VMP1-207ENST00000588131 BTBD3Q9Y2F9 522 aa10.85□□□□□ -0.67
VMP1-207ENST00000588131 SNRNP200O75643 2136 aaKnown RBP10.85□□□□□ -0.67
VMP1-207ENST00000588131 IGHV1OR21-1A0A087WYE8 117 aa10.84□□□□□ -0.67
VMP1-207ENST00000588131 A0A0J9YY10 115 aa10.84□□□□□ -0.67
VMP1-207ENST00000588131 TRBC2A0A5B9 178 aa10.84□□□□□ -0.67
VMP1-207ENST00000588131 OR2A25A4D2G3 310 aa10.84□□□□□ -0.67
VMP1-207ENST00000588131 RGS14O43566 566 aa10.84□□□□□ -0.67
VMP1-207ENST00000588131 OR1F1O43749 312 aa10.84□□□□□ -0.67
VMP1-207ENST00000588131 PRAMEF10O60809 474 aa10.84□□□□□ -0.67
VMP1-207ENST00000588131 VPS4BO75351 444 aa10.84□□□□□ -0.67
VMP1-207ENST00000588131 SH3BGRLO75368 114 aa10.84□□□□□ -0.67
VMP1-207ENST00000588131 TBX6O95947 436 aaPredicted RBP10.84□□□□□ -0.67
VMP1-207ENST00000588131 SERPINA6P08185 405 aa10.84□□□□□ -0.67
VMP1-207ENST00000588131 NCF2P19878 526 aaPredicted RBP10.84□□□□□ -0.67
VMP1-207ENST00000588131 ALDH4A1P30038 563 aa10.84□□□□□ -0.67
VMP1-207ENST00000588131 PLA2G5P39877 138 aa10.84□□□□□ -0.67
VMP1-207ENST00000588131 BCL6P41182 706 aa10.84□□□□□ -0.67
VMP1-207ENST00000588131 SCTRP47872 440 aa10.84□□□□□ -0.67
VMP1-207ENST00000588131 ATXN3P54252 364 aaPredicted RBP10.84□□□□□ -0.67
VMP1-207ENST00000588131 GFERP55789 205 aa10.84□□□□□ -0.67
VMP1-207ENST00000588131 CYP4F2P78329 520 aa10.84□□□□□ -0.67
VMP1-207ENST00000588131 ZNF33BQ06732 778 aa10.84□□□□□ -0.67
VMP1-207ENST00000588131 CSTF3Q12996 717 aaKnown RBP10.84□□□□□ -0.67
VMP1-207ENST00000588131 IMPG1Q17R60 797 aa10.84□□□□□ -0.67
VMP1-207ENST00000588131 PROX2Q3B8N5 592 aa10.84□□□□□ -0.67
VMP1-207ENST00000588131 GALNTL6Q49A17 601 aa10.84□□□□□ -0.67
VMP1-207ENST00000588131 SPDYAQ5MJ70 313 aa10.84□□□□□ -0.67
VMP1-207ENST00000588131 C6orf136Q5SQH8 315 aa10.84□□□□□ -0.67
VMP1-207ENST00000588131 PERM1Q5SV97 790 aa10.84□□□□□ -0.67
VMP1-207ENST00000588131 METTL21CQ5VZV1 264 aa10.84□□□□□ -0.67
VMP1-207ENST00000588131 IRGCQ6NXR0 463 aa10.84□□□□□ -0.67
VMP1-207ENST00000588131 GUSBP11Q6P575 273 aa10.84□□□□□ -0.67
VMP1-207ENST00000588131 KLHL35Q6PF15 583 aa10.84□□□□□ -0.67
VMP1-207ENST00000588131 CHSY3Q70JA7 882 aa10.84□□□□□ -0.67
VMP1-207ENST00000588131 TRPM8Q7Z2W7 1104 aa10.84□□□□□ -0.67
VMP1-207ENST00000588131 Q8N9G6 341 aaPredicted RBP10.84□□□□□ -0.67
VMP1-207ENST00000588131 UBE2E3Q969T4 207 aa10.84□□□□□ -0.67
VMP1-207ENST00000588131 REPS1Q96D71 796 aa10.84□□□□□ -0.67
VMP1-207ENST00000588131 ERP27Q96DN0 273 aa10.84□□□□□ -0.67
VMP1-207ENST00000588131 APIPQ96GX9 242 aa10.84□□□□□ -0.67
VMP1-207ENST00000588131 LRRC37BQ96QE4 947 aa10.84□□□□□ -0.67
VMP1-207ENST00000588131 RHBGQ9H310 441 aa10.84□□□□□ -0.67
VMP1-207ENST00000588131 PFDN4Q9NQP4 134 aa10.84□□□□□ -0.67
VMP1-207ENST00000588131 ARMCX1Q9P291 453 aa10.84□□□□□ -0.67
VMP1-207ENST00000588131 ZFP69BQ9UJL9 534 aa10.84□□□□□ -0.67
VMP1-207ENST00000588131 SNX7Q9UNH6 387 aa10.84□□□□□ -0.67
VMP1-207ENST00000588131 TSC22D4Q9Y3Q8 395 aa10.84□□□□□ -0.67
VMP1-207ENST00000588131 DNAH14Q0VDD8 3507 aa10.84□□□□□ -0.67
VMP1-207ENST00000588131 KNL1Q8NG31 2342 aa10.84□□□□□ -0.67
VMP1-207ENST00000588131 CPED1A4D0V7 1026 aa10.83□□□□□ -0.68
VMP1-207ENST00000588131 CCT8L1PA6NM43 557 aa10.83□□□□□ -0.68
VMP1-207ENST00000588131 NPIPB8E9PQR5 432 aa10.83□□□□□ -0.68
VMP1-207ENST00000588131 FOXE1O00358 373 aaPredicted RBP10.83□□□□□ -0.68
VMP1-207ENST00000588131 EBAG9O00559 213 aa10.83□□□□□ -0.68
VMP1-207ENST00000588131 UBDO15205 165 aa10.83□□□□□ -0.68
VMP1-207ENST00000588131 ZW10O43264 779 aa10.83□□□□□ -0.68
VMP1-207ENST00000588131 TNFSF14O43557 240 aa10.83□□□□□ -0.68
VMP1-207ENST00000588131 CCDC22O60826 627 aa10.83□□□□□ -0.68
VMP1-207ENST00000588131 RSL1D1O76021 490 aaKnown RBP10.83□□□□□ -0.68
VMP1-207ENST00000588131 TGFB1P01137 390 aa10.83□□□□□ -0.68
VMP1-207ENST00000588131 STATHP02808 62 aa10.83□□□□□ -0.68
VMP1-207ENST00000588131 ZNF806P0C7X5 589 aa10.83□□□□□ -0.68
VMP1-207ENST00000588131 ZNF883P0CG24 379 aa10.83□□□□□ -0.68
VMP1-207ENST00000588131 HSD3B1P14060 373 aa10.83□□□□□ -0.68
VMP1-207ENST00000588131 ST6GAL1P15907 406 aa10.83□□□□□ -0.68
VMP1-207ENST00000588131 PRPH2P23942 346 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms