RNA–Protein interactions for RNA: ENST00000586638.5

APOC1-201, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 425 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-201ENST00000586638 ZFP36L2P47974 494 aaKnown RBP9.8□□□□□ -0.84
APOC1-201ENST00000586638 MNAT1P51948 309 aa9.8□□□□□ -0.84
APOC1-201ENST00000586638 ATXN3P54252 364 aaPredicted RBP9.8□□□□□ -0.84
APOC1-201ENST00000586638 UFM1P61960 85 aa9.8□□□□□ -0.84
APOC1-201ENST00000586638 YBX1P67809 324 aaKnown RBP9.8□□□□□ -0.84
APOC1-201ENST00000586638 SIM1P81133 766 aaPredicted RBP9.8□□□□□ -0.84
APOC1-201ENST00000586638 RPL6Q02878 288 aaKnown RBP9.8□□□□□ -0.84
APOC1-201ENST00000586638 EMX2Q04743 252 aa9.8□□□□□ -0.84
APOC1-201ENST00000586638 PCDH1Q08174 1060 aa9.8□□□□□ -0.84
APOC1-201ENST00000586638 TBL3Q12788 808 aaKnown RBP9.8□□□□□ -0.84
APOC1-201ENST00000586638 CSTF3Q12996 717 aaKnown RBP9.8□□□□□ -0.84
APOC1-201ENST00000586638 LRP8Q14114 963 aa9.8□□□□□ -0.84
APOC1-201ENST00000586638 ARHGAP19Q14CB8 494 aa9.8□□□□□ -0.84
APOC1-201ENST00000586638 RFTN2Q52LD8 501 aaPredicted RBP9.8□□□□□ -0.84
APOC1-201ENST00000586638 PRRT3Q5FWE3 981 aa9.8□□□□□ -0.84
APOC1-201ENST00000586638 ATG9BQ674R7 924 aa9.8□□□□□ -0.84
APOC1-201ENST00000586638 MED27Q6P2C8 311 aa9.8□□□□□ -0.84
APOC1-201ENST00000586638 CYB5D1Q6P9G0 228 aa9.8□□□□□ -0.84
APOC1-201ENST00000586638 SLC23A3Q6PIS1 610 aa9.8□□□□□ -0.84
APOC1-201ENST00000586638 NXPE4Q6UWF7 544 aa9.8□□□□□ -0.84
APOC1-201ENST00000586638 ARMCX6Q7L4S7 300 aa9.8□□□□□ -0.84
APOC1-201ENST00000586638 ULK2Q8IYT8 1036 aa9.8□□□□□ -0.84
APOC1-201ENST00000586638 DEFB107AQ8IZN7 70 aa9.8□□□□□ -0.84
APOC1-201ENST00000586638 LIX1Q8N485 282 aa9.8□□□□□ -0.84
APOC1-201ENST00000586638 RAB42Q8N4Z0 105 aa9.8□□□□□ -0.84
APOC1-201ENST00000586638 FAM13CQ8NE31 585 aa9.8□□□□□ -0.84
APOC1-201ENST00000586638 OR2L8Q8NGY9 312 aa9.8□□□□□ -0.84
APOC1-201ENST00000586638 CLHC1Q8NHS4 586 aa9.8□□□□□ -0.84
APOC1-201ENST00000586638 SMPDL3AQ92484 453 aa9.8□□□□□ -0.84
APOC1-201ENST00000586638 WDR34Q96EX3 536 aa9.8□□□□□ -0.84
APOC1-201ENST00000586638 APIPQ96GX9 242 aa9.8□□□□□ -0.84
APOC1-201ENST00000586638 TEX37Q96LM6 180 aa9.8□□□□□ -0.84
APOC1-201ENST00000586638 MTERF1Q99551 399 aaKnown RBP9.8□□□□□ -0.84
APOC1-201ENST00000586638 HAUS8Q9BT25 410 aa9.8□□□□□ -0.84
APOC1-201ENST00000586638 THTPAQ9BU02 230 aa9.8□□□□□ -0.84
APOC1-201ENST00000586638 EFCAB11Q9BUY7 163 aa9.8□□□□□ -0.84
APOC1-201ENST00000586638 SLC25A23Q9BV35 468 aa9.8□□□□□ -0.84
APOC1-201ENST00000586638 PELI2Q9HAT8 420 aa9.8□□□□□ -0.84
APOC1-201ENST00000586638 MRGBPQ9NV56 204 aa9.8□□□□□ -0.84
APOC1-201ENST00000586638 GEMIN8Q9NWZ8 242 aaKnown RBP9.8□□□□□ -0.84
APOC1-201ENST00000586638 C1orf109Q9NX04 203 aa9.8□□□□□ -0.84
APOC1-201ENST00000586638 PRDM4Q9UKN5 801 aa9.8□□□□□ -0.84
APOC1-201ENST00000586638 PACSIN3Q9UKS6 424 aa9.8□□□□□ -0.84
APOC1-201ENST00000586638 SLC6A14Q9UN76 642 aa9.8□□□□□ -0.84
APOC1-201ENST00000586638 LHX6Q9UPM6 363 aa9.8□□□□□ -0.84
APOC1-201ENST00000586638 DLGAP4Q9Y2H0 992 aa9.8□□□□□ -0.84
APOC1-201ENST00000586638 HELZ2Q9BYK8 2649 aaKnown RBP9.8□□□□□ -0.84
APOC1-201ENST00000586638 THADAQ6YHU6 1953 aa9.79□□□□□ -0.84
APOC1-201ENST00000586638 ABCA7Q8IZY2 2146 aa9.79□□□□□ -0.84
APOC1-201ENST00000586638 SERTM1A2A2V5 107 aa9.79□□□□□ -0.84
APOC1-201ENST00000586638 A6NCN8 305 aa9.79□□□□□ -0.84
APOC1-201ENST00000586638 METTL12A8MUP2 240 aa9.79□□□□□ -0.84
APOC1-201ENST00000586638 H0YIV9 168 aa9.79□□□□□ -0.84
APOC1-201ENST00000586638 SORBS2O94875 1100 aaKnown RBP9.79□□□□□ -0.84
APOC1-201ENST00000586638 ETHE1O95571 254 aa9.79□□□□□ -0.84
APOC1-201ENST00000586638 CFIP05156 583 aa9.79□□□□□ -0.84
APOC1-201ENST00000586638 CCND1P24385 295 aa9.79□□□□□ -0.84
APOC1-201ENST00000586638 CD27P26842 260 aa9.79□□□□□ -0.84
APOC1-201ENST00000586638 PEBP1P30086 187 aaKnown RBP9.79□□□□□ -0.84
APOC1-201ENST00000586638 CASP2P42575 452 aa9.79□□□□□ -0.84
APOC1-201ENST00000586638 ACADVLP49748 655 aa9.79□□□□□ -0.84
APOC1-201ENST00000586638 RAB28P51157 221 aa9.79□□□□□ -0.84
APOC1-201ENST00000586638 RPS13P62277 151 aaKnown RBP9.79□□□□□ -0.84
APOC1-201ENST00000586638 REEP5Q00765 189 aa9.79□□□□□ -0.84
APOC1-201ENST00000586638 ILF3Q12906 894 aaKnown RBP eCLIP9.79□□□□□ -0.84
APOC1-201ENST00000586638 MAD2L1Q13257 205 aaPredicted RBP9.79□□□□□ -0.84
APOC1-201ENST00000586638 E2F2Q14209 437 aa9.79□□□□□ -0.84
APOC1-201ENST00000586638 DUOXA1Q1HG43 343 aa9.79□□□□□ -0.84
APOC1-201ENST00000586638 MMEL1Q495T6 779 aa9.79□□□□□ -0.84
APOC1-201ENST00000586638 TIGD2Q4W5G0 525 aa9.79□□□□□ -0.84
APOC1-201ENST00000586638 ABRAXAS1Q6UWZ7 409 aa9.79□□□□□ -0.84
APOC1-201ENST00000586638 C16orf89Q6UX73 402 aa9.79□□□□□ -0.84
APOC1-201ENST00000586638 RIPOR1Q6ZS17 1223 aa9.79□□□□□ -0.84
APOC1-201ENST00000586638 PIP4P1Q86T03 277 aa9.79□□□□□ -0.84
APOC1-201ENST00000586638 RETREG3Q86VR2 466 aa9.79□□□□□ -0.84
APOC1-201ENST00000586638 PARGQ86W56 976 aa9.79□□□□□ -0.84
APOC1-201ENST00000586638 C17orf64Q86WR6 236 aa9.79□□□□□ -0.84
APOC1-201ENST00000586638 SFTPA2Q8IWL1 248 aa9.79□□□□□ -0.84
APOC1-201ENST00000586638 SCUBE1Q8IWY4 988 aa9.79□□□□□ -0.84
APOC1-201ENST00000586638 DSELQ8IZU8 1212 aa9.79□□□□□ -0.84
APOC1-201ENST00000586638 ARHGAP24Q8N264 748 aa9.79□□□□□ -0.84
APOC1-201ENST00000586638 ZNF740Q8NDX6 193 aa9.79□□□□□ -0.84
APOC1-201ENST00000586638 CEP76Q8TAP6 659 aa9.79□□□□□ -0.84
APOC1-201ENST00000586638 NUDT8Q8WV74 236 aa9.79□□□□□ -0.84
APOC1-201ENST00000586638 PATE1Q8WXA2 126 aa9.79□□□□□ -0.84
APOC1-201ENST00000586638 SH3KBP1Q96B97 665 aa9.79□□□□□ -0.84
APOC1-201ENST00000586638 CXorf40BQ96DE9 158 aa9.79□□□□□ -0.84
APOC1-201ENST00000586638 CMTM7Q96FZ5 175 aa9.79□□□□□ -0.84
APOC1-201ENST00000586638 KLHDC7BQ96G42 594 aa9.79□□□□□ -0.84
APOC1-201ENST00000586638 APOLD1Q96LR9 279 aa9.79□□□□□ -0.84
APOC1-201ENST00000586638 HSPA12BQ96MM6 686 aa9.79□□□□□ -0.84
APOC1-201ENST00000586638 GTPBP2Q9BX10 602 aaKnown RBP9.79□□□□□ -0.84
APOC1-201ENST00000586638 RAB11FIP5Q9BXF6 653 aa9.79□□□□□ -0.84
APOC1-201ENST00000586638 EBPLQ9BY08 206 aa9.79□□□□□ -0.84
APOC1-201ENST00000586638 MIR1-1HGQ9H1L0 117 aa9.79□□□□□ -0.84
APOC1-201ENST00000586638 C1orf21Q9H246 121 aa9.79□□□□□ -0.84
APOC1-201ENST00000586638 ACTL8Q9H568 366 aa9.79□□□□□ -0.84
APOC1-201ENST00000586638 KIR3DX1Q9H7L2 352 aa9.79□□□□□ -0.84
APOC1-201ENST00000586638 WDR41Q9HAD4 459 aa9.79□□□□□ -0.84
APOC1-201ENST00000586638 TRNAU1APQ9NX07 287 aaKnown RBP9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms