RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 PCID2Q5JVF3 399 aa11.23□□□□□ -0.61
BRCA1-225ENST00000586385 ACER2Q5QJU3 275 aa11.23□□□□□ -0.61
BRCA1-225ENST00000586385 ICE2Q659A1 982 aa11.23□□□□□ -0.61
BRCA1-225ENST00000586385 PLAG1Q6DJT9 500 aa11.23□□□□□ -0.61
BRCA1-225ENST00000586385 TUBA3EQ6PEY2 450 aa11.23□□□□□ -0.61
BRCA1-225ENST00000586385 CES3Q6UWW8 571 aa11.23□□□□□ -0.61
BRCA1-225ENST00000586385 PEX26Q7Z412 305 aa11.23□□□□□ -0.61
BRCA1-225ENST00000586385 VN1R4Q7Z5H5 301 aa11.23□□□□□ -0.61
BRCA1-225ENST00000586385 CPEB2Q7Z5Q1 589 aaKnown RBP11.23□□□□□ -0.61
BRCA1-225ENST00000586385 LRRC6Q86X45 466 aa11.23□□□□□ -0.61
BRCA1-225ENST00000586385 SPPL2CQ8IUH8 684 aa11.23□□□□□ -0.61
BRCA1-225ENST00000586385 CRLF3Q8IUI8 442 aa11.23□□□□□ -0.61
BRCA1-225ENST00000586385 MPP5Q8N3R9 675 aa11.23□□□□□ -0.61
BRCA1-225ENST00000586385 PPHLN1Q8NEY8 458 aaKnown RBP11.23□□□□□ -0.61
BRCA1-225ENST00000586385 OR9A4Q8NGU2 314 aa11.23□□□□□ -0.61
BRCA1-225ENST00000586385 ZNF480Q8WV37 535 aa11.23□□□□□ -0.61
BRCA1-225ENST00000586385 C1orf54Q8WWF1 131 aa11.23□□□□□ -0.61
BRCA1-225ENST00000586385 MTFMTQ96DP5 389 aaKnown RBP11.23□□□□□ -0.61
BRCA1-225ENST00000586385 MFSD3Q96ES6 412 aa11.23□□□□□ -0.61
BRCA1-225ENST00000586385 SCMH1Q96GD3 660 aa11.23□□□□□ -0.61
BRCA1-225ENST00000586385 FRMD6Q96NE9 622 aa11.23□□□□□ -0.61
BRCA1-225ENST00000586385 PANX2Q96RD6 677 aa11.23□□□□□ -0.61
BRCA1-225ENST00000586385 CYTH2Q99418 400 aa11.23□□□□□ -0.61
BRCA1-225ENST00000586385 MED16Q9Y2X0 877 aa11.23□□□□□ -0.61
BRCA1-225ENST00000586385 MEMO1Q9Y316 297 aa11.23□□□□□ -0.61
BRCA1-225ENST00000586385 PCDHGB6Q9Y5F9 930 aa11.23□□□□□ -0.61
BRCA1-225ENST00000586385 A8MUI8 341 aa11.22□□□□□ -0.61
BRCA1-225ENST00000586385 MIF4GDA9UHW6 222 aaKnown RBP11.22□□□□□ -0.61
BRCA1-225ENST00000586385 GOLGA8KD6RF30 607 aa11.22□□□□□ -0.61
BRCA1-225ENST00000586385 GOLGA8TH3BQL2 631 aa11.22□□□□□ -0.61
BRCA1-225ENST00000586385 KPNA5O15131 536 aa11.22□□□□□ -0.61
BRCA1-225ENST00000586385 VPS26AO75436 327 aa11.22□□□□□ -0.61
BRCA1-225ENST00000586385 NDUFS3O75489 264 aa11.22□□□□□ -0.61
BRCA1-225ENST00000586385 SLC16A8O95907 504 aa11.22□□□□□ -0.61
BRCA1-225ENST00000586385 ANXA5P08758 320 aa11.22□□□□□ -0.61
BRCA1-225ENST00000586385 ICAM2P13598 275 aa11.22□□□□□ -0.61
BRCA1-225ENST00000586385 EZRP15311 586 aaKnown RBP11.22□□□□□ -0.61
BRCA1-225ENST00000586385 RPA3P35244 121 aaPredicted RBP11.22□□□□□ -0.61
BRCA1-225ENST00000586385 PNLIPRP1P54315 467 aa11.22□□□□□ -0.61
BRCA1-225ENST00000586385 RELAQ04206 551 aa11.22□□□□□ -0.61
BRCA1-225ENST00000586385 ARHGAP19Q14CB8 494 aa11.22□□□□□ -0.61
BRCA1-225ENST00000586385 NAA25Q14CX7 972 aa11.22□□□□□ -0.61
BRCA1-225ENST00000586385 SIX1Q15475 284 aaPredicted RBP11.22□□□□□ -0.61
BRCA1-225ENST00000586385 ZFHX3Q15911 3703 aa11.22□□□□□ -0.61
BRCA1-225ENST00000586385 KLHL38Q2WGJ6 581 aa11.22□□□□□ -0.61
BRCA1-225ENST00000586385 ANKRD20A4Q4UJ75 823 aa11.22□□□□□ -0.61
BRCA1-225ENST00000586385 RNFT1Q5M7Z0 435 aa11.22□□□□□ -0.61
BRCA1-225ENST00000586385 ANKRD37Q7Z713 158 aa11.22□□□□□ -0.61
BRCA1-225ENST00000586385 RAB42Q8N4Z0 105 aa11.22□□□□□ -0.61
BRCA1-225ENST00000586385 UBL4BQ8N7F7 174 aa11.22□□□□□ -0.61
BRCA1-225ENST00000586385 GIMAP7Q8NHV1 300 aa11.22□□□□□ -0.61
BRCA1-225ENST00000586385 GSDMBQ8TAX9 411 aa11.22□□□□□ -0.61
BRCA1-225ENST00000586385 MRFAP1L1Q96HT8 127 aa11.22□□□□□ -0.61
BRCA1-225ENST00000586385 CCDC138Q96M89 665 aa11.22□□□□□ -0.61
BRCA1-225ENST00000586385 FOPNLQ96NB1 174 aa11.22□□□□□ -0.61
BRCA1-225ENST00000586385 TREX2Q9BQ50 279 aaPredicted RBP11.22□□□□□ -0.61
BRCA1-225ENST00000586385 MACROD1Q9BQ69 325 aa11.22□□□□□ -0.61
BRCA1-225ENST00000586385 TRIM51Q9BSJ1 452 aa11.22□□□□□ -0.61
BRCA1-225ENST00000586385 KLHL1Q9NR64 748 aa11.22□□□□□ -0.61
BRCA1-225ENST00000586385 ANKRD10Q9NXR5 420 aa11.22□□□□□ -0.61
BRCA1-225ENST00000586385 ANAPC5Q9UJX4 755 aa11.22□□□□□ -0.61
BRCA1-225ENST00000586385 MRFAP1Q9Y605 127 aa11.22□□□□□ -0.61
BRCA1-225ENST00000586385 CAPN6Q9Y6Q1 641 aa11.22□□□□□ -0.61
BRCA1-225ENST00000586385 E7EVH7 732 aa11.21□□□□□ -0.61
BRCA1-225ENST00000586385 NPIPA5E9PKD4 350 aa11.21□□□□□ -0.61
BRCA1-225ENST00000586385 FAM227AF5H4B4 570 aa11.21□□□□□ -0.61
BRCA1-225ENST00000586385 NEURL1O76050 574 aa11.21□□□□□ -0.61
BRCA1-225ENST00000586385 VAPBO95292 243 aa11.21□□□□□ -0.61
BRCA1-225ENST00000586385 CLDN14O95500 239 aa11.21□□□□□ -0.61
BRCA1-225ENST00000586385 PTMAP06454 111 aaKnown RBP11.21□□□□□ -0.61
BRCA1-225ENST00000586385 UQCRHP07919 91 aa11.21□□□□□ -0.61
BRCA1-225ENST00000586385 SSTR2P30874 369 aa11.21□□□□□ -0.61
BRCA1-225ENST00000586385 CLCN7P51798 805 aa11.21□□□□□ -0.61
BRCA1-225ENST00000586385 HSF1Q00613 529 aa11.21□□□□□ -0.61
BRCA1-225ENST00000586385 RBPJQ06330 500 aa11.21□□□□□ -0.61
BRCA1-225ENST00000586385 SNX1Q13596 522 aa11.21□□□□□ -0.61
BRCA1-225ENST00000586385 TSTA3Q13630 321 aaPredicted RBP11.21□□□□□ -0.61
BRCA1-225ENST00000586385 OR1C1Q15619 314 aa11.21□□□□□ -0.61
BRCA1-225ENST00000586385 BTBD16Q32M84 506 aa11.21□□□□□ -0.61
BRCA1-225ENST00000586385 ZNF468Q5VIY5 522 aaPredicted RBP11.21□□□□□ -0.61
BRCA1-225ENST00000586385 SPINK14Q6IE38 97 aa11.21□□□□□ -0.61
BRCA1-225ENST00000586385 SPNS3Q6ZMD2 512 aa11.21□□□□□ -0.61
BRCA1-225ENST00000586385 CENPUQ71F23 418 aa11.21□□□□□ -0.61
BRCA1-225ENST00000586385 ZNF227Q86WZ6 799 aa11.21□□□□□ -0.61
BRCA1-225ENST00000586385 PDSS2Q86YH6 399 aa11.21□□□□□ -0.61
BRCA1-225ENST00000586385 TMEM139Q8IV31 216 aa11.21□□□□□ -0.61
BRCA1-225ENST00000586385 REXO1L1PQ8IX06 675 aa11.21□□□□□ -0.61
BRCA1-225ENST00000586385 SUN3Q8TAQ9 357 aa11.21□□□□□ -0.61
BRCA1-225ENST00000586385 MAGEC3Q8TD91 643 aa11.21□□□□□ -0.61
BRCA1-225ENST00000586385 C14orf79Q96F83 325 aa11.21□□□□□ -0.61
BRCA1-225ENST00000586385 DMRTA2Q96SC8 542 aa11.21□□□□□ -0.61
BRCA1-225ENST00000586385 KIFC1Q9BW19 673 aa11.21□□□□□ -0.61
BRCA1-225ENST00000586385 TRIM5Q9C035 493 aa11.21□□□□□ -0.61
BRCA1-225ENST00000586385 ENKD1Q9H0I2 346 aa11.21□□□□□ -0.61
BRCA1-225ENST00000586385 EIF2B3Q9NR50 452 aaKnown RBP11.21□□□□□ -0.61
BRCA1-225ENST00000586385 SYBUQ9NX95 663 aa11.21□□□□□ -0.61
BRCA1-225ENST00000586385 HCN3Q9P1Z3 774 aa11.21□□□□□ -0.61
BRCA1-225ENST00000586385 NPIPA1Q9UND3 350 aa11.21□□□□□ -0.61
BRCA1-225ENST00000586385 SH2B3Q9UQQ2 575 aa11.21□□□□□ -0.61
BRCA1-225ENST00000586385 ZNF148Q9UQR1 794 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms